Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fe100P05_F_N03
         (670 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ666693-1|ABG29167.1|  250|Apis mellifera MAX dimerization prot...    28   0.092
EF625896-1|ABR45903.1|  683|Apis mellifera hexamerin protein.          24   1.1  
AY855337-1|AAW47987.1|  510|Apis mellifera tyrosine hydroxylase ...    24   1.1  
AY601637-1|AAT11850.1|  683|Apis mellifera hexamerin 70b protein.      24   1.1  
AF134821-1|AAD40236.1|  226|Apis mellifera hexamerin protein.          24   1.1  
AY703685-1|AAU12681.1|  200|Apis mellifera abdominal-A protein.        23   2.0  
AB023025-1|BAA74592.1|  133|Apis mellifera actin protein.              23   2.0  
AJ968562-1|CAI91546.1|  998|Apis mellifera protein ( Apis mellif...    23   2.6  
AM076717-1|CAJ28210.1|  501|Apis mellifera serotonin receptor pr...    21   8.0  

>DQ666693-1|ABG29167.1|  250|Apis mellifera MAX dimerization protein
           protein.
          Length = 250

 Score = 27.9 bits (59), Expect = 0.092
 Identities = 12/32 (37%), Positives = 23/32 (71%)
 Frame = +1

Query: 304 LKSLDEKHRKYKVMEYTLATKRRRLRQQIPDL 399
           +KSL+E+ RK+ V +  L+ ++R LR+++  L
Sbjct: 97  IKSLEERERKHAVHKEQLSREQRFLRRRLEQL 128


>EF625896-1|ABR45903.1|  683|Apis mellifera hexamerin protein.
          Length = 683

 Score = 24.2 bits (50), Expect = 1.1
 Identities = 9/12 (75%), Positives = 11/12 (91%)
 Frame = -2

Query: 573 FFSIFKTILQHY 538
           FFSI+KTIL +Y
Sbjct: 417 FFSIYKTILDYY 428


>AY855337-1|AAW47987.1|  510|Apis mellifera tyrosine hydroxylase
           protein.
          Length = 510

 Score = 24.2 bits (50), Expect = 1.1
 Identities = 12/29 (41%), Positives = 17/29 (58%)
 Frame = +1

Query: 373 RLRQQIPDLARTIEVIEKLKEQKEEVETQ 459
           RLR+ I  LAR ++ IE  K     VE++
Sbjct: 93  RLREGIGSLARILKTIENFKGTVTHVESR 121


>AY601637-1|AAT11850.1|  683|Apis mellifera hexamerin 70b protein.
          Length = 683

 Score = 24.2 bits (50), Expect = 1.1
 Identities = 9/12 (75%), Positives = 11/12 (91%)
 Frame = -2

Query: 573 FFSIFKTILQHY 538
           FFSI+KTIL +Y
Sbjct: 417 FFSIYKTILDYY 428


>AF134821-1|AAD40236.1|  226|Apis mellifera hexamerin protein.
          Length = 226

 Score = 24.2 bits (50), Expect = 1.1
 Identities = 9/12 (75%), Positives = 11/12 (91%)
 Frame = -2

Query: 573 FFSIFKTILQHY 538
           FFSI+KTIL +Y
Sbjct: 43  FFSIYKTILDYY 54


>AY703685-1|AAU12681.1|  200|Apis mellifera abdominal-A protein.
          Length = 200

 Score = 23.4 bits (48), Expect = 2.0
 Identities = 29/116 (25%), Positives = 48/116 (41%), Gaps = 5/116 (4%)
 Frame = -3

Query: 563 SSRLYSNITLAPSHKH--TDFVGGTLAFTNT*SLRRNCVSTSSFCSFNFSITSIVRAKSG 390
           +S +Y  ++ A +H H          AF  T S+     ST++  +   +  ++  A +G
Sbjct: 85  TSSMYPYVSAAAAHHHHQQQQAVAAAAFGATSSMVPGFGSTAASSAALAAAAAVDAATAG 144

Query: 389 I-CCRNRLLLVANVY--SITLYLRCFSSRLFKTTSTPSALIGDFINSSTLSTNSAS 231
              CR    L  NV   S    +        +  +TPS+L+     SS +S  SAS
Sbjct: 145 DKSCRYTASLAGNVAPASADPMVNYTLGHHHQNGATPSSLVSSASASSAVSAASAS 200


>AB023025-1|BAA74592.1|  133|Apis mellifera actin protein.
          Length = 133

 Score = 23.4 bits (48), Expect = 2.0
 Identities = 7/24 (29%), Positives = 13/24 (54%)
 Frame = +1

Query: 484 VKANVPPTKSVCLWLGANVMLEYS 555
           +K   PP K   +W+G +++   S
Sbjct: 102 IKIIAPPEKKYSVWIGGSILASLS 125


>AJ968562-1|CAI91546.1|  998|Apis mellifera protein ( Apis mellifera
           ORF for hypotheticalprotein. ).
          Length = 998

 Score = 23.0 bits (47), Expect = 2.6
 Identities = 11/29 (37%), Positives = 19/29 (65%)
 Frame = -1

Query: 247 LQIQLLVFQNTT*GSRVLLRLLPFLFIVK 161
           L++QL++ + +T   R+LL +LP    VK
Sbjct: 220 LEVQLVIEEQSTEQERLLLSVLPEHVAVK 248


>AM076717-1|CAJ28210.1|  501|Apis mellifera serotonin receptor
           protein.
          Length = 501

 Score = 21.4 bits (43), Expect = 8.0
 Identities = 9/21 (42%), Positives = 14/21 (66%)
 Frame = -3

Query: 299 TSTPSALIGDFINSSTLSTNS 237
           TST S ++ + +NS+   TNS
Sbjct: 334 TSTKSTIVRNHLNSTCSVTNS 354


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 147,683
Number of Sequences: 438
Number of extensions: 2699
Number of successful extensions: 11
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 20221290
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)