Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fe100P05_F_M24
         (653 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY884065-1|AAX84206.1|  697|Tribolium castaneum laccase 1 protein.     24   1.3  
AY316682-1|AAQ83696.1|  456|Tribolium castaneum Sp-like zinc fin...    23   2.2  
AJ307577-1|CAC84070.1|  301|Tribolium castaneum dachshund protein.     23   2.9  
X91618-1|CAA62821.1|  524|Tribolium castaneum hunchback protein.       22   3.8  
AM292352-1|CAL23164.1|  250|Tribolium castaneum gustatory recept...    21   8.9  

>AY884065-1|AAX84206.1|  697|Tribolium castaneum laccase 1 protein.
          Length = 697

 Score = 23.8 bits (49), Expect = 1.3
 Identities = 10/31 (32%), Positives = 18/31 (58%)
 Frame = -2

Query: 187 SNYNCSVVGTDGPVVRRTTVVIFEYAHPTSH 95
           S  +C  VGT G ++++    ++E   PTS+
Sbjct: 645 STVDCDDVGTFGAILKKLLPKVYEDYCPTSN 675


>AY316682-1|AAQ83696.1|  456|Tribolium castaneum Sp-like zinc finger
           protein protein.
          Length = 456

 Score = 23.0 bits (47), Expect = 2.2
 Identities = 8/25 (32%), Positives = 11/25 (44%)
 Frame = +1

Query: 40  TENVGSQHAGNFGDCSSGRGWWGVH 114
           T +  + H G   D  +   WW VH
Sbjct: 169 TMSGATHHGGIKSDSVTSNAWWDVH 193


>AJ307577-1|CAC84070.1|  301|Tribolium castaneum dachshund protein.
          Length = 301

 Score = 22.6 bits (46), Expect = 2.9
 Identities = 8/21 (38%), Positives = 12/21 (57%)
 Frame = +3

Query: 342 ATWPARPPSESSLPDSKERSH 404
           ++WP RPP  + +  S   SH
Sbjct: 35  SSWPGRPPKRAPVGLSLAASH 55


>X91618-1|CAA62821.1|  524|Tribolium castaneum hunchback protein.
          Length = 524

 Score = 22.2 bits (45), Expect = 3.8
 Identities = 8/20 (40%), Positives = 10/20 (50%)
 Frame = +1

Query: 328 VLQTLRPGQHGLHQRVRCQI 387
           VL T+  G HG H    C +
Sbjct: 484 VLYTIHMGYHGFHNPFTCNM 503


>AM292352-1|CAL23164.1|  250|Tribolium castaneum gustatory receptor
           candidate 31 protein.
          Length = 250

 Score = 21.0 bits (42), Expect = 8.9
 Identities = 7/12 (58%), Positives = 11/12 (91%)
 Frame = -2

Query: 199 AVSTSNYNCSVV 164
           +VS+S+YNC V+
Sbjct: 231 SVSSSSYNCEVL 242


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 153,131
Number of Sequences: 336
Number of extensions: 3412
Number of successful extensions: 7
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 16865010
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)