Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fe100P05_F_M22
         (663 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC001108-1|AAH01108.1|  290|Homo sapiens PIH1 domain containing ...   123   7e-28
AK000650-1|BAA91307.1|  290|Homo sapiens protein ( Homo sapiens ...   123   7e-28
BC019238-1|AAH19238.1|  315|Homo sapiens PIH1 domain containing ...    52   2e-06

>BC001108-1|AAH01108.1|  290|Homo sapiens PIH1 domain containing 1
           protein.
          Length = 290

 Score =  123 bits (296), Expect = 7e-28
 Identities = 58/152 (38%), Positives = 96/152 (63%), Gaps = 1/152 (0%)
 Frame = +2

Query: 194 KKLLSSVDTVP-SRLVKPTPGFCVKTTRIPDNKKVFVNICQTDAIPCPRDITNDELMYIL 370
           K+L  +  T P S  ++P PGFC+KT       KVF+NIC + +IP P D+T +EL+ +L
Sbjct: 33  KELQQAQTTRPESTQIQPQPGFCIKTNS--SEGKVFINICHSPSIPPPADVTEEELLQML 90

Query: 371 SSEDPSSYRVPMSIGEGRTEHDKSGAPATAYDVAVNPEFFKKIEKDELFQTFFLTVVFEG 550
             ED + +R+PMS+GE   E D  G   TAYDVAVN +F+++++  +  +   +T+  EG
Sbjct: 91  E-EDQAGFRIPMSLGEPHAELDAKGQGCTAYDVAVNSDFYRRMQNSDFLRELVITIAREG 149

Query: 551 LQDKYQFEIDMQKFTILKNRKSIGTLQSHRIQ 646
           L+DKY  +++  ++ ++KNR  +G++    I+
Sbjct: 150 LEDKYNLQLN-PEWRMMKNRPFMGSISQQNIR 180


>AK000650-1|BAA91307.1|  290|Homo sapiens protein ( Homo sapiens
           cDNA FLJ20643 fis, clone KAT02633. ).
          Length = 290

 Score =  123 bits (296), Expect = 7e-28
 Identities = 58/152 (38%), Positives = 96/152 (63%), Gaps = 1/152 (0%)
 Frame = +2

Query: 194 KKLLSSVDTVP-SRLVKPTPGFCVKTTRIPDNKKVFVNICQTDAIPCPRDITNDELMYIL 370
           K+L  +  T P S  ++P PGFC+KT       KVF+NIC + +IP P D+T +EL+ +L
Sbjct: 33  KELQQAQTTRPESTQIQPQPGFCIKTNS--SEGKVFINICHSPSIPPPADVTEEELLQML 90

Query: 371 SSEDPSSYRVPMSIGEGRTEHDKSGAPATAYDVAVNPEFFKKIEKDELFQTFFLTVVFEG 550
             ED + +R+PMS+GE   E D  G   TAYDVAVN +F+++++  +  +   +T+  EG
Sbjct: 91  E-EDQAGFRIPMSLGEPHAELDAKGQGCTAYDVAVNSDFYRRMQNSDFLRELVITIAREG 149

Query: 551 LQDKYQFEIDMQKFTILKNRKSIGTLQSHRIQ 646
           L+DKY  +++  ++ ++KNR  +G++    I+
Sbjct: 150 LEDKYNLQLN-PEWRMMKNRPFMGSISQQNIR 180


>BC019238-1|AAH19238.1|  315|Homo sapiens PIH1 domain containing 2
           protein.
          Length = 315

 Score = 51.6 bits (118), Expect = 2e-06
 Identities = 38/141 (26%), Positives = 68/141 (48%), Gaps = 1/141 (0%)
 Frame = +2

Query: 242 PTPGFCVKTTRI-PDNKKVFVNICQTDAIPCPRDITNDELMYILSSEDPSSYRVPMSIGE 418
           P P  C++T  + P  K +F+N+CQ   IP P+  T               + VP+++G+
Sbjct: 48  PEPQLCLQTRILKPKEKILFINLCQWTRIPAPQSTT---------------HPVPLTVGK 92

Query: 419 GRTEHDKSGAPATAYDVAVNPEFFKKIEKDELFQTFFLTVVFEGLQDKYQFEIDMQKFTI 598
                + S A  T  DVA NP+     EKD++ +   + +  + +++K+QF +    + I
Sbjct: 93  PEDTTEISDA-YTVIDVAYNPDVLHAAEKDQVKKNQLIQMAMKCIEEKFQFTLS-HSYHI 150

Query: 599 LKNRKSIGTLQSHRIQIRDIQ 661
            K R   G++Q  +  +  IQ
Sbjct: 151 TKFRIK-GSIQRMKQNLMGIQ 170


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 98,118,054
Number of Sequences: 237096
Number of extensions: 2139835
Number of successful extensions: 8169
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 7857
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8165
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 7478817430
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)