Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fe100P05_F_M22
         (663 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY331183-1|AAP94623.1|  953|Apis mellifera NMDA-type glutamate r...    23   2.6  
DQ325089-1|ABD14103.1|  185|Apis mellifera complementary sex det...    22   4.5  
DQ325088-1|ABD14102.1|  185|Apis mellifera complementary sex det...    22   4.5  
AY569720-1|AAS86673.1|  406|Apis mellifera complementary sex det...    22   4.5  
AY569698-1|AAS86651.1|  407|Apis mellifera complementary sex det...    22   4.5  
DQ013068-1|AAY81956.1|  931|Apis mellifera dusty protein kinase ...    21   7.9  
DQ013067-1|AAY81955.1|  969|Apis mellifera dusty protein kinase ...    21   7.9  
AY569694-1|AAS86647.1|  400|Apis mellifera complementary sex det...    21   7.9  
AF213012-1|AAG43568.1|  492|Apis mellifera acetylcholinesterase ...    21   7.9  
AB181702-1|BAE06051.1|  628|Apis mellifera acetylcholinesterase ...    21   7.9  

>AY331183-1|AAP94623.1|  953|Apis mellifera NMDA-type glutamate
           receptor 1 protein.
          Length = 953

 Score = 23.0 bits (47), Expect = 2.6
 Identities = 8/17 (47%), Positives = 13/17 (76%)
 Frame = -2

Query: 101 YCLLVVMETNKFINFSY 51
           YC+ ++ E +K INF+Y
Sbjct: 462 YCMDLLKELSKTINFTY 478


>DQ325089-1|ABD14103.1|  185|Apis mellifera complementary sex
           determiner protein.
          Length = 185

 Score = 22.2 bits (45), Expect = 4.5
 Identities = 8/17 (47%), Positives = 11/17 (64%)
 Frame = +2

Query: 284 NKKVFVNICQTDAIPCP 334
           NKK++ NI   + IP P
Sbjct: 109 NKKLYYNIINIEQIPVP 125


>DQ325088-1|ABD14102.1|  185|Apis mellifera complementary sex
           determiner protein.
          Length = 185

 Score = 22.2 bits (45), Expect = 4.5
 Identities = 8/17 (47%), Positives = 11/17 (64%)
 Frame = +2

Query: 284 NKKVFVNICQTDAIPCP 334
           NKK++ NI   + IP P
Sbjct: 109 NKKLYYNIINIEQIPVP 125


>AY569720-1|AAS86673.1|  406|Apis mellifera complementary sex
           determiner protein.
          Length = 406

 Score = 22.2 bits (45), Expect = 4.5
 Identities = 8/17 (47%), Positives = 11/17 (64%)
 Frame = +2

Query: 284 NKKVFVNICQTDAIPCP 334
           NKK++ NI   + IP P
Sbjct: 329 NKKLYYNIINIEQIPVP 345


>AY569698-1|AAS86651.1|  407|Apis mellifera complementary sex
           determiner protein.
          Length = 407

 Score = 22.2 bits (45), Expect = 4.5
 Identities = 8/17 (47%), Positives = 11/17 (64%)
 Frame = +2

Query: 284 NKKVFVNICQTDAIPCP 334
           NKK++ NI   + IP P
Sbjct: 333 NKKLYYNIINIEQIPVP 349


>DQ013068-1|AAY81956.1|  931|Apis mellifera dusty protein kinase
           isoform B protein.
          Length = 931

 Score = 21.4 bits (43), Expect = 7.9
 Identities = 9/23 (39%), Positives = 17/23 (73%)
 Frame = -3

Query: 70  NSSILAIFSFVHKLDKINKSTTI 2
           NSS  +I+SF+ +L+ I  S+++
Sbjct: 472 NSSPFSIYSFLERLNLIFMSSSL 494


>DQ013067-1|AAY81955.1|  969|Apis mellifera dusty protein kinase
           isoform A protein.
          Length = 969

 Score = 21.4 bits (43), Expect = 7.9
 Identities = 9/23 (39%), Positives = 17/23 (73%)
 Frame = -3

Query: 70  NSSILAIFSFVHKLDKINKSTTI 2
           NSS  +I+SF+ +L+ I  S+++
Sbjct: 510 NSSPFSIYSFLERLNLIFMSSSL 532


>AY569694-1|AAS86647.1|  400|Apis mellifera complementary sex
           determiner protein.
          Length = 400

 Score = 21.4 bits (43), Expect = 7.9
 Identities = 8/18 (44%), Positives = 12/18 (66%)
 Frame = +2

Query: 281 DNKKVFVNICQTDAIPCP 334
           +NKK++ NI   + IP P
Sbjct: 322 NNKKLYYNINYIEQIPVP 339


>AF213012-1|AAG43568.1|  492|Apis mellifera acetylcholinesterase
           protein.
          Length = 492

 Score = 21.4 bits (43), Expect = 7.9
 Identities = 7/11 (63%), Positives = 8/11 (72%)
 Frame = +1

Query: 466 CGCQSRVLQEN 498
           CGC S +L EN
Sbjct: 305 CGCNSTMLNEN 315


>AB181702-1|BAE06051.1|  628|Apis mellifera acetylcholinesterase
           protein.
          Length = 628

 Score = 21.4 bits (43), Expect = 7.9
 Identities = 7/11 (63%), Positives = 8/11 (72%)
 Frame = +1

Query: 466 CGCQSRVLQEN 498
           CGC S +L EN
Sbjct: 305 CGCNSTMLNEN 315


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 196,675
Number of Sequences: 438
Number of extensions: 4723
Number of successful extensions: 20
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 20
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 20
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 19977660
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)