Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fe100P05_F_M04
         (653 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

08_02_0834 - 21626491-21626508,21626720-21626843,21626927-216270...    98   6e-21
03_05_1069 + 30118930-30120120                                         29   3.2  
11_01_0650 - 5265106-5265305,5265972-5266049,5266391-5266544,526...    29   4.3  
01_01_0101 - 766382-767487,767599-767756,767900-768615                 28   7.5  
01_06_1306 + 36151907-36154369                                         27   9.9  

>08_02_0834 -
           21626491-21626508,21626720-21626843,21626927-21627012,
           21627869-21627874
          Length = 77

 Score = 97.9 bits (233), Expect = 6e-21
 Identities = 40/69 (57%), Positives = 55/69 (79%)
 Frame = +2

Query: 80  ERYNIHSQLEHLQSKYIGTGHADTTKYEWLMNQHRDSCCSYMGHPDLLSYFAIVENESKA 259
           +R+NI+SQLEHLQ+KY+GTGHAD  ++EW +N  RDS  SY+GH  +L+YF+I ENES  
Sbjct: 5   DRFNINSQLEHLQAKYVGTGHADLNRFEWAVNIQRDSYASYIGHYPMLAYFSIAENESIG 64

Query: 260 RVKFNLMER 286
           R ++N M+R
Sbjct: 65  RERYNFMQR 73


>03_05_1069 + 30118930-30120120
          Length = 396

 Score = 29.1 bits (62), Expect = 3.2
 Identities = 18/52 (34%), Positives = 27/52 (51%), Gaps = 2/52 (3%)
 Frame = +2

Query: 134 TGHADTTKYEWLMNQHRDSCCSYM-GHPDLLSYFAIVE-NESKARVKFNLME 283
           +G AD T Y W  +    SC S + GH + +   AIVE N+  A V  + ++
Sbjct: 281 SGSADNTIYVWRRDGGVHSCLSVLTGHTEPIRCLAIVEDNKDNAAVPVDAVD 332


>11_01_0650 -
           5265106-5265305,5265972-5266049,5266391-5266544,
           5266635-5266701,5266723-5266796,5266910-5267794
          Length = 485

 Score = 28.7 bits (61), Expect = 4.3
 Identities = 16/56 (28%), Positives = 29/56 (51%)
 Frame = +1

Query: 424 ISITFNKHN*SIQIVPPKTQLLSIKTTNFNNRYSL*FRIGSMVKCLTILFLYTNLF 591
           +SIT    N ++++      L+S++   F+NR  +  R+ S+V     +F YT  F
Sbjct: 195 LSITCCSFNATLRVRVDVPSLVSLRLDEFDNRAPVLERMPSLVDAFVRIFFYTKDF 250


>01_01_0101 - 766382-767487,767599-767756,767900-768615
          Length = 659

 Score = 27.9 bits (59), Expect = 7.5
 Identities = 12/36 (33%), Positives = 20/36 (55%)
 Frame = -2

Query: 241 YDRKVTQQIRMTHVTAARVAMLVHKPFIFCSVGVAC 134
           YDR + QQ+ +  ++AA VA +       C +G+ C
Sbjct: 564 YDRLIEQQVGVGEISAATVANMHELERKLCIIGLHC 599


>01_06_1306 + 36151907-36154369
          Length = 820

 Score = 27.5 bits (58), Expect = 9.9
 Identities = 11/19 (57%), Positives = 12/19 (63%)
 Frame = -1

Query: 236 SQSNSTNPDDPCNCSKSRD 180
           S +NS N   PCNCS S D
Sbjct: 166 SAANSCNSLSPCNCSSSSD 184


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,255,709
Number of Sequences: 37544
Number of extensions: 256170
Number of successful extensions: 514
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 508
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 514
length of database: 14,793,348
effective HSP length: 79
effective length of database: 11,827,372
effective search space used: 1632177336
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)