Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fe100P05_F_M02
(655 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U41991-1|AAA83341.2| 1400|Caenorhabditis elegans Rna polymerase,... 30 1.6
Z81585-1|CAB04681.2| 343|Caenorhabditis elegans Hypothetical pr... 29 2.9
Z81062-14|CAB02947.2| 362|Caenorhabditis elegans Hypothetical p... 29 3.8
Z93393-6|CAB07691.2| 495|Caenorhabditis elegans Hypothetical pr... 28 6.7
Z81455-6|CAN86597.1| 695|Caenorhabditis elegans Hypothetical pr... 27 8.8
Z81455-5|CAJ90505.1| 611|Caenorhabditis elegans Hypothetical pr... 27 8.8
Z81455-4|CAJ76928.1| 680|Caenorhabditis elegans Hypothetical pr... 27 8.8
Z81455-2|CAD54123.1| 745|Caenorhabditis elegans Hypothetical pr... 27 8.8
Z81455-1|CAB03807.2| 792|Caenorhabditis elegans Hypothetical pr... 27 8.8
Z75554-8|CAA99959.2| 259|Caenorhabditis elegans Hypothetical pr... 27 8.8
AL032637-27|CAN86620.1| 695|Caenorhabditis elegans Hypothetical... 27 8.8
AL032637-26|CAJ90512.1| 611|Caenorhabditis elegans Hypothetical... 27 8.8
AL032637-25|CAJ76956.1| 680|Caenorhabditis elegans Hypothetical... 27 8.8
AL032637-24|CAD54171.1| 745|Caenorhabditis elegans Hypothetical... 27 8.8
AL032637-23|CAA21625.2| 792|Caenorhabditis elegans Hypothetical... 27 8.8
AL032637-1|CAD54169.1| 555|Caenorhabditis elegans Hypothetical ... 27 8.8
>U41991-1|AAA83341.2| 1400|Caenorhabditis elegans Rna polymerase,
class iii (c) protein1 protein.
Length = 1400
Score = 29.9 bits (64), Expect = 1.6
Identities = 14/53 (26%), Positives = 29/53 (54%), Gaps = 1/53 (1%)
Frame = -2
Query: 390 ICKSAFVFSSTVFALVSIWKSDICWFFKPVMFKFLKRITIP-ASLGAITSNDV 235
ICK+ + +++ A + K+ +C F + +K + IT P ++GAI + +
Sbjct: 1002 ICKNLEAYKTSLLANSCLTKTQLCSFIELCYYKVARAITEPGTAVGAIAATSI 1054
>Z81585-1|CAB04681.2| 343|Caenorhabditis elegans Hypothetical
protein T05E12.1 protein.
Length = 343
Score = 29.1 bits (62), Expect = 2.9
Identities = 14/53 (26%), Positives = 24/53 (45%)
Frame = -2
Query: 324 ICWFFKPVMFKFLKRITIPASLGAITSNDVTTSGSIGHMSYCGIPLLVFSKNC 166
I + +M+ L +T+P + S + +SG H Y G PL+ + C
Sbjct: 43 ISFSLSAMMYSVLDFLTLPIFVCKERSFCIVSSGMFTHDKYIGFPLIATTSGC 95
>Z81062-14|CAB02947.2| 362|Caenorhabditis elegans Hypothetical
protein F15A4.3 protein.
Length = 362
Score = 28.7 bits (61), Expect = 3.8
Identities = 12/42 (28%), Positives = 21/42 (50%)
Frame = -2
Query: 414 NSITMSPTICKSAFVFSSTVFALVSIWKSDICWFFKPVMFKF 289
N + T +S F+ S VF + +W+ ++ W + V KF
Sbjct: 192 NRTPLLQTCLQSIFIGSVAVFGYIMLWRVNLAWRNRIVNLKF 233
>Z93393-6|CAB07691.2| 495|Caenorhabditis elegans Hypothetical
protein Y48E1B.5 protein.
Length = 495
Score = 27.9 bits (59), Expect = 6.7
Identities = 15/38 (39%), Positives = 19/38 (50%)
Frame = +2
Query: 152 SSATEQFLEKTSKGIPQYDIWPIDPLVVTSLDVIAPSD 265
SS Q L K P DI+PI P++ S+D I D
Sbjct: 313 SSIFHQKLSKIFSAEPLPDIYPISPVIDFSMDTIYNDD 350
>Z81455-6|CAN86597.1| 695|Caenorhabditis elegans Hypothetical
protein B0399.1f protein.
Length = 695
Score = 27.5 bits (58), Expect = 8.8
Identities = 14/31 (45%), Positives = 18/31 (58%)
Frame = +2
Query: 542 TFTCESIGEPKITLSSDLSSALEKDSGNNSL 634
T T S G P+I++ S S+A SGN SL
Sbjct: 634 TTTTSSDGLPRISVGSTSSTATSASSGNGSL 664
>Z81455-5|CAJ90505.1| 611|Caenorhabditis elegans Hypothetical
protein B0399.1e protein.
Length = 611
Score = 27.5 bits (58), Expect = 8.8
Identities = 14/31 (45%), Positives = 18/31 (58%)
Frame = +2
Query: 542 TFTCESIGEPKITLSSDLSSALEKDSGNNSL 634
T T S G P+I++ S S+A SGN SL
Sbjct: 550 TTTTSSDGLPRISVGSTSSTATSASSGNGSL 580
>Z81455-4|CAJ76928.1| 680|Caenorhabditis elegans Hypothetical
protein B0399.1d protein.
Length = 680
Score = 27.5 bits (58), Expect = 8.8
Identities = 14/31 (45%), Positives = 18/31 (58%)
Frame = +2
Query: 542 TFTCESIGEPKITLSSDLSSALEKDSGNNSL 634
T T S G P+I++ S S+A SGN SL
Sbjct: 619 TTTTSSDGLPRISVGSTSSTATSASSGNGSL 649
>Z81455-2|CAD54123.1| 745|Caenorhabditis elegans Hypothetical
protein B0399.1b protein.
Length = 745
Score = 27.5 bits (58), Expect = 8.8
Identities = 14/31 (45%), Positives = 18/31 (58%)
Frame = +2
Query: 542 TFTCESIGEPKITLSSDLSSALEKDSGNNSL 634
T T S G P+I++ S S+A SGN SL
Sbjct: 684 TTTTSSDGLPRISVGSTSSTATSASSGNGSL 714
>Z81455-1|CAB03807.2| 792|Caenorhabditis elegans Hypothetical
protein B0399.1a protein.
Length = 792
Score = 27.5 bits (58), Expect = 8.8
Identities = 14/31 (45%), Positives = 18/31 (58%)
Frame = +2
Query: 542 TFTCESIGEPKITLSSDLSSALEKDSGNNSL 634
T T S G P+I++ S S+A SGN SL
Sbjct: 731 TTTTSSDGLPRISVGSTSSTATSASSGNGSL 761
>Z75554-8|CAA99959.2| 259|Caenorhabditis elegans Hypothetical
protein ZC455.10 protein.
Length = 259
Score = 27.5 bits (58), Expect = 8.8
Identities = 13/23 (56%), Positives = 13/23 (56%)
Frame = -2
Query: 393 TICKSAFVFSSTVFALVSIWKSD 325
T C VFSSTVFA WK D
Sbjct: 7 TTCFLIIVFSSTVFANDKSWKED 29
>AL032637-27|CAN86620.1| 695|Caenorhabditis elegans Hypothetical
protein B0399.1f protein.
Length = 695
Score = 27.5 bits (58), Expect = 8.8
Identities = 14/31 (45%), Positives = 18/31 (58%)
Frame = +2
Query: 542 TFTCESIGEPKITLSSDLSSALEKDSGNNSL 634
T T S G P+I++ S S+A SGN SL
Sbjct: 634 TTTTSSDGLPRISVGSTSSTATSASSGNGSL 664
>AL032637-26|CAJ90512.1| 611|Caenorhabditis elegans Hypothetical
protein B0399.1e protein.
Length = 611
Score = 27.5 bits (58), Expect = 8.8
Identities = 14/31 (45%), Positives = 18/31 (58%)
Frame = +2
Query: 542 TFTCESIGEPKITLSSDLSSALEKDSGNNSL 634
T T S G P+I++ S S+A SGN SL
Sbjct: 550 TTTTSSDGLPRISVGSTSSTATSASSGNGSL 580
>AL032637-25|CAJ76956.1| 680|Caenorhabditis elegans Hypothetical
protein B0399.1d protein.
Length = 680
Score = 27.5 bits (58), Expect = 8.8
Identities = 14/31 (45%), Positives = 18/31 (58%)
Frame = +2
Query: 542 TFTCESIGEPKITLSSDLSSALEKDSGNNSL 634
T T S G P+I++ S S+A SGN SL
Sbjct: 619 TTTTSSDGLPRISVGSTSSTATSASSGNGSL 649
>AL032637-24|CAD54171.1| 745|Caenorhabditis elegans Hypothetical
protein B0399.1b protein.
Length = 745
Score = 27.5 bits (58), Expect = 8.8
Identities = 14/31 (45%), Positives = 18/31 (58%)
Frame = +2
Query: 542 TFTCESIGEPKITLSSDLSSALEKDSGNNSL 634
T T S G P+I++ S S+A SGN SL
Sbjct: 684 TTTTSSDGLPRISVGSTSSTATSASSGNGSL 714
>AL032637-23|CAA21625.2| 792|Caenorhabditis elegans Hypothetical
protein B0399.1a protein.
Length = 792
Score = 27.5 bits (58), Expect = 8.8
Identities = 14/31 (45%), Positives = 18/31 (58%)
Frame = +2
Query: 542 TFTCESIGEPKITLSSDLSSALEKDSGNNSL 634
T T S G P+I++ S S+A SGN SL
Sbjct: 731 TTTTSSDGLPRISVGSTSSTATSASSGNGSL 761
>AL032637-1|CAD54169.1| 555|Caenorhabditis elegans Hypothetical
protein B0399.1c protein.
Length = 555
Score = 27.5 bits (58), Expect = 8.8
Identities = 14/31 (45%), Positives = 18/31 (58%)
Frame = +2
Query: 542 TFTCESIGEPKITLSSDLSSALEKDSGNNSL 634
T T S G P+I++ S S+A SGN SL
Sbjct: 494 TTTTSSDGLPRISVGSTSSTATSASSGNGSL 524
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,748,592
Number of Sequences: 27780
Number of extensions: 315307
Number of successful extensions: 812
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 776
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 812
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1455289764
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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