Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fe100P05_F_L20
         (649 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

03_03_0265 - 16000085-16000319,16001730-16001854,16004323-16005492     29   2.4  
11_02_0147 - 8791117-8792502                                           29   3.2  

>03_03_0265 - 16000085-16000319,16001730-16001854,16004323-16005492
          Length = 509

 Score = 29.5 bits (63), Expect = 2.4
 Identities = 12/23 (52%), Positives = 15/23 (65%)
 Frame = -1

Query: 205 CDTARRSICIYPRLARTYFE*SV 137
           CDTARR+    PR+   YFE S+
Sbjct: 271 CDTARRTFAELPRILPVYFEYSI 293


>11_02_0147 - 8791117-8792502
          Length = 461

 Score = 29.1 bits (62), Expect = 3.2
 Identities = 17/60 (28%), Positives = 27/60 (45%)
 Frame = +3

Query: 126 ESSGTDHSKYVRANRGYIQIERLAVSQCEMFTRMGRVCVYIVACRDDRTNASRTETCILK 305
           +    D SK+ +    + Q +R+  S+C  ++ + R C   V C        RTE CI K
Sbjct: 97  QQQNRDESKH-QVGESHSQ-QRIFCSKCRSYSHLSRDCKLSVFCIIFAKETHRTEDCIRK 154


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,689,651
Number of Sequences: 37544
Number of extensions: 253817
Number of successful extensions: 458
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 448
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 458
length of database: 14,793,348
effective HSP length: 79
effective length of database: 11,827,372
effective search space used: 1608522592
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)