Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fe100P05_F_K21
(543 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPBC215.15 |sec13||COPII-coated vesicle component Sec13|Schizosa... 204 7e-54
SPAC15F9.02 |seh1||nucleoporin Seh1 |Schizosaccharomyces pombe|c... 83 3e-17
SPAC806.02c |||Par A family ATPase iron cluster assembly protein... 56 3e-09
SPCC18.05c |||notchless-like protein|Schizosaccharomyces pombe|c... 56 3e-09
SPCC1672.10 |mis16||kinetochore protein Mis16 |Schizosaccharomyc... 52 7e-08
SPAC29A4.18 |prw1||Clr6 histone deacetylase complex subunit Prw1... 51 1e-07
SPCC5E4.03c |taf72||transcription factor TFIID complex subunit 5... 50 2e-07
SPAC12G12.14c |pfs2||WD repeat protein Pfs2|Schizosaccharomyces ... 48 7e-07
SPBC1289.11 |spf38|cwf17|splicing factor Spf38|Schizosaccharomyc... 46 4e-06
SPBC16C6.13c |sec27||coatomer beta' subunit |Schizosaccharomyces... 43 3e-05
SPAC343.04c |gnr1||heterotrimeric G protein beta subunit Gnr1|Sc... 43 3e-05
SPBC713.05 |||WD repeat protein, human MAPK organizer 1 |Schizos... 42 4e-05
SPAC630.14c |tup12||transcriptional corepressor Tup12 |Schizosac... 42 4e-05
SPBC21B10.05c |pop3|wat1|WD repeat protein Pop3|Schizosaccharomy... 41 1e-04
SPAC227.12 |||U4/U6 x U5 tri-snRNP complex subunit Prp4 family|S... 41 1e-04
SPBC31F10.13c |hip1|hir1|hira protein Hip1|Schizosaccharomyces p... 40 2e-04
SPBC1711.07 |||WD repeat protein Rrb1 |Schizosaccharomyces pombe... 40 3e-04
SPCC895.06 |||RNA polymerase II elongator complex subunit Elp2 |... 39 4e-04
SPBC3D6.12 |||U3 snoRNA associted protein Dip2 |Schizosaccharomy... 39 5e-04
SPAC4F8.11 |||WD repeat protein, human WDR24 family|Schizosaccha... 39 5e-04
SPAC821.08c |slp1||sleepy homolog Slp1|Schizosaccharomyces pombe... 39 5e-04
SPBC887.04c |lub1||WD repeat protein Lub1|Schizosaccharomyces po... 38 0.001
SPAC17H9.19c |cdt2|sev1|WD repeat protein Cdt2|Schizosaccharomyc... 38 0.001
SPBC16A3.05c |rae1||RNA export factor Rae1|Schizosaccharomyces p... 38 0.001
SPBC8D2.20c |sec31||COPII-coated vesicle component Sec31 |Schizo... 36 0.003
SPAC4D7.03 |pop2|sud1|F-box/WD repeat protein Pop2|Schizosacchar... 36 0.004
SPAC23C4.02 |crn1||actin binding protein, coronin Crn1|Schizosac... 36 0.005
SPBC713.04c |||U3 snoRNP-associated protein Utp1|Schizosaccharom... 35 0.007
SPBC354.03 |swd3||WD repeat protein Swd3|Schizosaccharomyces pom... 35 0.009
SPAC57A10.05c |pof1||F-box protein Pof1|Schizosaccharomyces pomb... 34 0.012
SPAC9G1.05 |||actin cortical patch component Aip1 |Schizosacchar... 33 0.021
SPBC1718.01 |pop1|ste16, SPBC2G2.18|F-box/WD repeat protein Pop1... 32 0.048
SPAC29E6.01 |pof11|SPAC30.05, mug156|F-box protein Pof11|Schizos... 32 0.063
SPBC428.19c |||U3 snoRNP protein Utp15 |Schizosaccharomyces pomb... 31 0.11
SPAC17D4.01 |pex7|SPAC1834.12|peroxin-7 |Schizosaccharomyces pom... 31 0.11
SPBP22H7.07 |prp5|cwf1|WD repeat protein Prp5|Schizosaccharomyce... 31 0.11
SPAC824.04 |||WD repeat protein|Schizosaccharomyces pombe|chr 1|... 31 0.15
SPAC6B12.15 |cpc2|rkp1|RACK1 homologue Cpc2|Schizosaccharomyces ... 31 0.15
SPCC16A11.02 |utp13|SPCC63.16|U3 snoRNP-associated protein Utp13... 30 0.19
SPBC32F12.02 |rec14||recombination protein Rec14|Schizosaccharom... 30 0.25
SPBC577.09 |||ERCC-8 homolog |Schizosaccharomyces pombe|chr 2|||... 29 0.34
SPAC26H5.03 |||WD repeat protein Cac2|Schizosaccharomyces pombe|... 28 0.77
SPBC21H7.05 |sfc6||transcription factor TFIIIC complex subunit S... 28 1.0
SPAC2E1P5.05 |||U3 snoRNP-associated protein Rrp9 |Schizosacchar... 28 1.0
SPAC11G7.02 |pub1||ubiquitin-protein ligase E3|Schizosaccharomyc... 27 1.4
SPAC664.15 |||CCR4-Not complex subunit Caf4/Mdv1 |Schizosaccharo... 27 1.4
SPBC17D11.08 |||WD repeat protein, human WDR68 family|Schizosacc... 27 1.4
SPCC16C4.08c |skb15||Shk1 kinase binding protein 15|Schizosaccha... 27 1.4
SPAC13C5.06c |mug121||sequence orphan|Schizosaccharomyces pombe|... 27 1.8
SPAC25H1.08c |||ribosome biogenesis protein Sqt1|Schizosaccharom... 27 1.8
SPBC646.17c |dic1|SPBC855.01c, SPBP35G2.01c, mug44|dynein interm... 27 2.4
SPCC1620.04c |mug55||Cdc20/Fizzy family WD repeat protein|Schizo... 27 2.4
SPBC6B1.10 |prp17||splicing factor Prp17|Schizosaccharomyces pom... 27 2.4
SPBC29A3.06 |||CGI-48 family|Schizosaccharomyces pombe|chr 2|||M... 27 2.4
SPBC32H8.07 |git5|gpb1|heterotrimeric G protein beta subunit Git... 27 2.4
SPAC57A7.11 |mip1||WD repeat protein Mip1|Schizosaccharomyces po... 26 3.1
SPAC11E3.05 |||ubiquitin-protein ligase E3|Schizosaccharomyces p... 26 3.1
SPAC23H3.05c |swd1||COMPASS complex subunit Swd1|Schizosaccharom... 26 3.1
SPAC23G3.01 |rpb2|SPAC521.06|DNA-directed RNA polymerase II comp... 26 4.1
SPAC12B10.03 |||WD repeat protein, human WDR20 family|Schizosacc... 26 4.1
SPCC553.04 |cyp9||WD repeat containing cyclophilin family peptid... 26 4.1
SPAC4D7.05 |sum1|tif34|translation initiation factor eIF3i|Schiz... 25 5.5
SPBC15D4.03 |slm9||hira protein Slm9|Schizosaccharomyces pombe|c... 25 5.5
SPBC32H8.09 |||WD repeat protein, human WDR8 family|Schizosaccha... 25 5.5
SPAC13G7.08c |crb3||WD repeat protein Crb3|Schizosaccharomyces p... 25 7.2
SPBC106.11c |plg7||phospholipase A2 |Schizosaccharomyces pombe|c... 25 7.2
SPBC16E9.11c |pub3||ubiquitin-protein ligase E3|Schizosaccharomy... 25 7.2
SPBC15D4.14 |taf73||TATA-binding protein associated factor |Schi... 25 9.5
SPBC4B4.08 |ght2||hexose transporter Ght2 |Schizosaccharomyces p... 25 9.5
SPCC965.07c |gst2||glutathione S-transferase Gst2|Schizosaccharo... 25 9.5
>SPBC215.15 |sec13||COPII-coated vesicle component
Sec13|Schizosaccharomyces pombe|chr 2|||Manual
Length = 297
Score = 204 bits (498), Expect = 7e-54
Identities = 90/179 (50%), Positives = 128/179 (71%), Gaps = 1/179 (0%)
Frame = +3
Query: 3 MIHDAELDYXGLKLATCSSDNSVKIYDIKNGTQTLAADLKGHFGPVWQVAWAHPKYGNLL 182
MIHDA LDY G +LATCSSD ++K++ I+N QTL L+GH GPVWQ+ WAHPK+G +L
Sbjct: 11 MIHDAILDYYGKRLATCSSDQTIKVFSIENNQQTLLETLRGHSGPVWQLGWAHPKFGTIL 70
Query: 183 ASCSYDRKVIIWKES-GEWTKLYEYTGHESSVNSVAWAPAEYGLILACCSSDGSISIIQY 359
AS SYD VI+W+E+ G W++L ++T H++SVN+V+WAP EYG +LAC SSDG +S++++
Sbjct: 71 ASASYDGHVIVWRETGGVWSELMDHTAHQASVNAVSWAPHEYGALLACASSDGKVSVLEF 130
Query: 360 SQDTGNWDVKKITGAHAIGVNSISWCPALSADLNLDPLTNKDAPKRLVTGGCDNLIQXW 536
+D G+ D + T AH G N++ W P S ++ + PK+L T GCDNL++ W
Sbjct: 131 -KDDGSCDTRIFT-AHEPGCNAVCWSPP-SLSGSVVGQSPAAGPKKLATAGCDNLVKIW 186
Score = 55.6 bits (128), Expect = 4e-09
Identities = 42/153 (27%), Positives = 65/153 (42%), Gaps = 15/153 (9%)
Frame = +3
Query: 33 GLKLATCSSDNSVKIYDIKNGTQTLAADLKGHFGPVWQVAWAHPKYGNLLASCSYDRKVI 212
G LA+ S D V ++ G + D H V V+WA +YG LLA S D KV
Sbjct: 67 GTILASASYDGHVIVWRETGGVWSELMDHTAHQASVNAVSWAPHEYGALLACASSDGKVS 126
Query: 213 I--WKESGEW-TKLYEYTGHESSVNSVAWAPAEY-GLI-----------LACCSSDGSIS 347
+ +K+ G T+++ T HE N+V W+P G + LA D +
Sbjct: 127 VLEFKDDGSCDTRIF--TAHEPGCNAVCWSPPSLSGSVVGQSPAAGPKKLATAGCDNLVK 184
Query: 348 IIQYSQDTGNWDVKKITGAHAIGVNSISWCPAL 446
I + NW ++ H ++W P++
Sbjct: 185 IWAFDAGVNNWILEDTLAGHVDWTRDVAWAPSV 217
Score = 46.8 bits (106), Expect = 2e-06
Identities = 42/119 (35%), Positives = 53/119 (44%), Gaps = 9/119 (7%)
Frame = +3
Query: 39 KLATCSSDNSVKIYDIKNGTQT--LAADLKGHFGPVWQVAWAHPKYG---NLLASCSYDR 203
KLAT DN VKI+ G L L GH VAWA P G LAS S D+
Sbjct: 173 KLATAGCDNLVKIWAFDAGVNNWILEDTLAGHVDWTRDVAWA-PSVGLTKTYLASASQDK 231
Query: 204 KVIIWKESGE--WTKLYEYTGHESSVNSVAW--APAEYGLILACCSSDGSISIIQYSQD 368
V IW + G+ W K T E +AW + + G ILA D + + + SQ+
Sbjct: 232 NVFIWTKEGDGPWQKT-PLT--EEKFPDIAWRVSWSLSGNILAVSCGDNKVYLFKESQN 287
>SPAC15F9.02 |seh1||nucleoporin Seh1 |Schizosaccharomyces pombe|chr
1|||Manual
Length = 339
Score = 83.0 bits (196), Expect = 3e-17
Identities = 43/133 (32%), Positives = 76/133 (57%), Gaps = 8/133 (6%)
Frame = +3
Query: 3 MIHDAELDYXGLKLATCSSDNSVKIYDIKNGTQTLAADLKGHFGP--VWQVAWAHPKYGN 176
+++D D+ G ++ +CS+D VK+YD + T+T A + G + +VAWAHP +G
Sbjct: 16 LVNDVTYDFYGRRMVSCSADQRVKVYDFNDDTETWAITSEWRAGDASLMRVAWAHPSFGQ 75
Query: 177 LLASCSYDRKVIIWK------ESGEWTKLYEYTGHESSVNSVAWAPAEYGLILACCSSDG 338
+LA CS DR V I++ ES W ++ + S+V +++ P ++G LA S+D
Sbjct: 76 VLAVCSLDRGVRIYEEQKKNFESKTWVEVAKLMDARSAVLDISFCPFQHGCKLAAVSADA 135
Query: 339 SISIIQYSQDTGN 377
++ I + + + GN
Sbjct: 136 TLRIYE-AMEPGN 147
Score = 41.9 bits (94), Expect = 6e-05
Identities = 30/124 (24%), Positives = 52/124 (41%), Gaps = 16/124 (12%)
Frame = +3
Query: 33 GLKLATCSSDNSVKIYD-----------IKNGTQTLAADLKGHFGPVWQVAWAHPKYGN- 176
G KLA S+D +++IY+ + N + + + P + V W ++
Sbjct: 125 GCKLAAVSADATLRIYEAMEPGNLTYWTLMNEIALMPSPPSRNEQPAFCVNWCPSRWREQ 184
Query: 177 -LLASCSYDRKVIIWKESGEWTKLYEYTGHESSVNSVAWAP---AEYGLILACCSSDGSI 344
+ C D + G+W K+ E GH + + WAP + Y LI C DG++
Sbjct: 185 YIAVGCMNDAYIYKQNSHGKWKKVAELPGHTDLIRDICWAPSMGSSYYLIATAC-KDGNV 243
Query: 345 SIIQ 356
I +
Sbjct: 244 RIFK 247
Score = 35.9 bits (79), Expect = 0.004
Identities = 47/188 (25%), Positives = 75/188 (39%), Gaps = 22/188 (11%)
Frame = +3
Query: 33 GLKLATCSSDNSVKIYD-----IKNGTQTLAADLKGHFGPVWQVAWAHPKYGNLLASCSY 197
G LA CS D V+IY+ ++ T A L V +++ ++G LA+ S
Sbjct: 74 GQVLAVCSLDRGVRIYEEQKKNFESKTWVEVAKLMDARSAVLDISFCPFQHGCKLAAVSA 133
Query: 198 DRKVIIWK--ESGE---WTKLYEY-------TGHESSVNSVAWAPAEYG--LILACCSSD 335
D + I++ E G WT + E + +E V W P+ + I C +D
Sbjct: 134 DATLRIYEAMEPGNLTYWTLMNEIALMPSPPSRNEQPAFCVNWCPSRWREQYIAVGCMND 193
Query: 336 GSISIIQYSQDT-GNWDVKKITGAHAIGVNSISWCPALSADLNLDPLTNKDAPKRL--VT 506
I Y Q++ G W H + I W P++ + L KD R+ V
Sbjct: 194 AYI----YKQNSHGKWKKVAELPGHTDLIRDICWAPSMGSSYYLIATACKDGNVRIFKVE 249
Query: 507 GGCDNLIQ 530
C+ + Q
Sbjct: 250 TLCEEVFQ 257
Score = 32.7 bits (71), Expect = 0.036
Identities = 15/60 (25%), Positives = 27/60 (45%)
Frame = +3
Query: 255 TGHESSVNSVAWAPAEYGLILACCSSDGSISIIQYSQDTGNWDVKKITGAHAIGVNSISW 434
T H+ VN V + YG + CS+D + + ++ DT W + A + ++W
Sbjct: 11 TNHQDLVNDVTYD--FYGRRMVSCSADQRVKVYDFNDDTETWAITSEWRAGDASLMRVAW 68
>SPAC806.02c |||Par A family ATPase iron cluster assembly
protein|Schizosaccharomyces pombe|chr 1|||Manual
Length = 608
Score = 56.4 bits (130), Expect = 3e-09
Identities = 41/129 (31%), Positives = 66/129 (51%), Gaps = 2/129 (1%)
Frame = +3
Query: 33 GLKLATCSSDNSVKIYDIKNGTQ-TLAADLKGHFGPVWQVAWAHPKYGNLLASCSYDRKV 209
G LATCS D SV I++ + A L+ H V V W HP +LL S SYD +
Sbjct: 390 GNYLATCSRDKSVWIWEATEDDEFDCLAVLQEHTQDVKVVTW-HPT-EDLLVSGSYDNSI 447
Query: 210 IIWKESG-EWTKLYEYTGHESSVNSVAWAPAEYGLILACCSSDGSISIIQYSQDTGNWDV 386
W++ G +W + GH ++V ++A++P G LA +DG++ + + + + N DV
Sbjct: 448 CFWRDDGDDWALTCQLQGHTNTVWALAFSP--NGNTLASADNDGNVFL--WIKISSNEDV 503
Query: 387 KKITGAHAI 413
I + +
Sbjct: 504 ATIDSTNIL 512
Score = 50.0 bits (114), Expect = 2e-07
Identities = 42/135 (31%), Positives = 60/135 (44%), Gaps = 2/135 (1%)
Frame = +3
Query: 42 LATCSSDNSVKIYDIKNGTQTLAADLKGHFGPVWQVAWAHPKYGNLLASCSYDRKVIIWK 221
LA S D+ V I + + A L+GH V +AW+ GN LA+CS D+ V IW+
Sbjct: 349 LAVASFDSVVSINEKIDDDWECTAALEGHENEVKCIAWSCN--GNYLATCSRDKSVWIWE 406
Query: 222 --ESGEWTKLYEYTGHESSVNSVAWAPAEYGLILACCSSDGSISIIQYSQDTGNWDVKKI 395
E E+ L H V V W P E +L S D SI + D +W +
Sbjct: 407 ATEDDEFDCLAVLQEHTQDVKVVTWHPTED--LLVSGSYDNSICF--WRDDGDDWALTCQ 462
Query: 396 TGAHAIGVNSISWCP 440
H V ++++ P
Sbjct: 463 LQGHTNTVWALAFSP 477
>SPCC18.05c |||notchless-like protein|Schizosaccharomyces pombe|chr
3|||Manual
Length = 502
Score = 56.4 bits (130), Expect = 3e-09
Identities = 33/98 (33%), Positives = 51/98 (52%)
Frame = +3
Query: 3 MIHDAELDYXGLKLATCSSDNSVKIYDIKNGTQTLAADLKGHFGPVWQVAWAHPKYGNLL 182
+++ A G +AT S D+SV+++D K G A L+GH V+Q AW+ LL
Sbjct: 391 VVNHASFSPDGRCIATASFDSSVRLWDGKTGK--FLATLRGHVAAVYQCAWSTD--SRLL 446
Query: 183 ASCSYDRKVIIWKESGEWTKLYEYTGHESSVNSVAWAP 296
S S D + +W + K ++ GHE V +V W+P
Sbjct: 447 VSSSQDTTLKVWDVRSKKMK-FDLPGHEDQVFAVDWSP 483
Score = 46.0 bits (104), Expect = 4e-06
Identities = 28/82 (34%), Positives = 46/82 (56%)
Frame = +3
Query: 42 LATCSSDNSVKIYDIKNGTQTLAADLKGHFGPVWQVAWAHPKYGNLLASCSYDRKVIIWK 221
LA+ S DN+V+I+++K +TL L GH P+ V W N + S SYD+ + IW
Sbjct: 242 LASGSKDNTVRIWNVK--LRTLLFTLSGHTAPITCVRWGGQ---NWIYSSSYDKTIRIW- 295
Query: 222 ESGEWTKLYEYTGHESSVNSVA 287
++ + L+ GH + VN ++
Sbjct: 296 DAKDGKCLHILKGHAARVNHLS 317
Score = 34.3 bits (75), Expect = 0.012
Identities = 30/109 (27%), Positives = 47/109 (43%), Gaps = 5/109 (4%)
Frame = +3
Query: 39 KLATCSSDNSVKIYDIKNGTQTLAADLKGHFGPVWQVAWAHPKYGNLLASCSYDRKVIIW 218
+L T S D + +++D TQT A +KGH V VAWA +++A+ S D + W
Sbjct: 149 RLVTGSGDFTARLWDCD--TQTPIATMKGHTNWVSCVAWAPD--ASIIATGSMDNTIRFW 204
Query: 219 KESGEWTKLYEYTGHESSVNSVAW-----APAEYGLILACCSSDGSISI 350
H + ++ W AP +LA S D ++ I
Sbjct: 205 DPKKGSPIGDALRRHTKPIMALCWQPLHLAPDSGPYLLASGSKDNTVRI 253
Score = 32.3 bits (70), Expect = 0.048
Identities = 23/88 (26%), Positives = 40/88 (45%)
Frame = +3
Query: 171 GNLLASCSYDRKVIIWKESGEWTKLYEYTGHESSVNSVAWAPAEYGLILACCSSDGSISI 350
G L S S D ++I+W + + GH+ VN +++P G +A S D S+ +
Sbjct: 358 GERLVSASDDLQLILWDPQKSTKPITKMHGHQKVVNHASFSPD--GRCIATASFDSSVRL 415
Query: 351 IQYSQDTGNWDVKKITGAHAIGVNSISW 434
+ TG + + + G H V +W
Sbjct: 416 --WDGKTGKF-LATLRG-HVAAVYQCAW 439
>SPCC1672.10 |mis16||kinetochore protein Mis16 |Schizosaccharomyces
pombe|chr 3|||Manual
Length = 430
Score = 51.6 bits (118), Expect = 7e-08
Identities = 38/144 (26%), Positives = 68/144 (47%), Gaps = 11/144 (7%)
Frame = +3
Query: 42 LATCSSDNSVKIYDIK-NGTQTLAADLKGHFGPVWQVAWAHPKYGNLLASCSYDRKVIIW 218
LA+ S D +++I+D + N + ++ H + VA +P LLA+ S D+ V +W
Sbjct: 251 LASVSDDCTLQIHDTRLNPEEEAPKVIQAHSKAINAVA-INPFNDYLLATASADKTVALW 309
Query: 219 KESGEWTKLYEYTGHESSVNSVAWAPAEYGLILACCSSDGSISIIQYSQ----------D 368
+ +L+ GHE V + W+P + ILA S+D + I + +
Sbjct: 310 DLRNPYQRLHTLEGHEDEVYGLEWSPHDEP-ILASSSTDRRVCIWDLEKIGEEQTPEDAE 368
Query: 369 TGNWDVKKITGAHAIGVNSISWCP 440
G+ ++ + G H ++ SWCP
Sbjct: 369 DGSPELLFMHGGHTNRISEFSWCP 392
Score = 50.0 bits (114), Expect = 2e-07
Identities = 33/100 (33%), Positives = 51/100 (51%), Gaps = 13/100 (13%)
Frame = +3
Query: 42 LATCSSDNSVKIYDIKNGTQTLAADLKGHFGPVWQVAWAHPKYGNLLASCSYDRKVIIWK 221
LAT S+D +V ++D++N Q L L+GH V+ + W+ P +LAS S DR+V IW
Sbjct: 297 LATASADKTVALWDLRNPYQRLHT-LEGHEDEVYGLEWS-PHDEPILASSSTDRRVCIWD 354
Query: 222 -------------ESGEWTKLYEYTGHESSVNSVAWAPAE 302
E G L+ + GH + ++ +W P E
Sbjct: 355 LEKIGEEQTPEDAEDGSPELLFMHGGHTNRISEFSWCPNE 394
>SPAC29A4.18 |prw1||Clr6 histone deacetylase complex subunit
Prw1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 431
Score = 50.8 bits (116), Expect = 1e-07
Identities = 31/100 (31%), Positives = 54/100 (54%), Gaps = 2/100 (2%)
Frame = +3
Query: 42 LATCSSDNSVKIYDIK--NGTQTLAADLKGHFGPVWQVAWAHPKYGNLLASCSYDRKVII 215
LA+ S D + ++DI+ + + A + H GP+ VA+ +P +LA+CS D+ + +
Sbjct: 250 LASVSYDQYLHVHDIRRPDASTKPARSVHAHSGPIHSVAF-NPHNDFILATCSTDKTIAL 308
Query: 216 WKESGEWTKLYEYTGHESSVNSVAWAPAEYGLILACCSSD 335
W +L+ GHE V ++++P E ILA S+D
Sbjct: 309 WDLRNLNQRLHTLEGHEDIVTKISFSPHEEP-ILASTSAD 347
Score = 48.0 bits (109), Expect = 9e-07
Identities = 33/116 (28%), Positives = 57/116 (49%), Gaps = 13/116 (11%)
Frame = +3
Query: 42 LATCSSDNSVKIYDIKNGTQTLAADLKGHFGPVWQVAWAHPKYGNLLASCSYDRKVIIW- 218
LATCS+D ++ ++D++N Q L L+GH V +++++ P +LAS S DR+ ++W
Sbjct: 297 LATCSTDKTIALWDLRNLNQRLHT-LEGHEDIVTKISFS-PHEEPILASTSADRRTLVWD 354
Query: 219 ------------KESGEWTKLYEYTGHESSVNSVAWAPAEYGLILACCSSDGSISI 350
+ G L+ + GH S + W P Y +A + D + I
Sbjct: 355 LSRIGEDQPAEEAQDGPPELLFMHGGHTSCTIDMDWCP-NYNWTMATAAEDNILQI 409
Score = 34.3 bits (75), Expect = 0.012
Identities = 27/94 (28%), Positives = 43/94 (45%), Gaps = 3/94 (3%)
Frame = +3
Query: 78 YDIKNGTQTLAADLKGHFGPVWQVAWAHPKYGNLLASCSYDRKV---IIWKESGEWTKLY 248
Y+ + L + H V V + H K+ +LLAS SYD+ + I +
Sbjct: 217 YNESDSASVLKVHISSHEKQVSDVRF-HYKHQDLLASVSYDQYLHVHDIRRPDASTKPAR 275
Query: 249 EYTGHESSVNSVAWAPAEYGLILACCSSDGSISI 350
H ++SVA+ P ILA CS+D +I++
Sbjct: 276 SVHAHSGPIHSVAFNP-HNDFILATCSTDKTIAL 308
>SPCC5E4.03c |taf72||transcription factor TFIID complex subunit 5
Taf72|Schizosaccharomyces pombe|chr 3|||Manual
Length = 643
Score = 50.4 bits (115), Expect = 2e-07
Identities = 28/85 (32%), Positives = 44/85 (51%)
Frame = +3
Query: 42 LATCSSDNSVKIYDIKNGTQTLAADLKGHFGPVWQVAWAHPKYGNLLASCSYDRKVIIWK 221
L +CS D S +++ + T+T KGH GPVW VA+ +G+ A+ S+D+ +W
Sbjct: 394 LLSCSEDASARLWSVD--TKTALVAYKGHTGPVWDVAFG--PFGHYFATASHDQTAQLW- 448
Query: 222 ESGEWTKLYEYTGHESSVNSVAWAP 296
L + GH S V+ V + P
Sbjct: 449 SCDHIYPLRVFAGHLSDVDCVTFHP 473
>SPAC12G12.14c |pfs2||WD repeat protein Pfs2|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 509
Score = 48.4 bits (110), Expect = 7e-07
Identities = 37/109 (33%), Positives = 51/109 (46%)
Frame = +3
Query: 42 LATCSSDNSVKIYDIKNGTQTLAADLKGHFGPVWQVAWAHPKYGNLLASCSYDRKVIIWK 221
LA+ S DN VK +D + GT A L GH + Q ++ N LA+ S D ++
Sbjct: 221 LASGSKDNLVKFWDPRTGT--CIATLHGHKNTIMQASFQKNFGSNYLATVSRDSTCRVF- 277
Query: 222 ESGEWTKLYEYTGHESSVNSVAWAPAEYGLILACCSSDGSISIIQYSQD 368
+ + GHE VN V W P Y +L SDGS++ YS D
Sbjct: 278 DLRAMKDVRVLRGHEKDVNCVTWHPL-YPNLLTTGGSDGSVN--HYSLD 323
>SPBC1289.11 |spf38|cwf17|splicing factor Spf38|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 340
Score = 46.0 bits (104), Expect = 4e-06
Identities = 34/110 (30%), Positives = 53/110 (48%), Gaps = 6/110 (5%)
Frame = +3
Query: 33 GLKLATCSSDNSVKIYDIK------NGTQTLAADLKGHFGPVWQVAWAHPKYGNLLASCS 194
G L + S DN+V+I+D+K Q + G + VAW+ + + + S
Sbjct: 231 GSSLLSNSMDNTVRIFDVKPFASAQRQLQIFEGAIHGQEHNLLGVAWS--RNSRFVGAGS 288
Query: 195 YDRKVIIWKESGEWTKLYEYTGHESSVNSVAWAPAEYGLILACCSSDGSI 344
D+ V +W +G+ Y GHE SVN V + P + I+ CSSD +I
Sbjct: 289 SDKNVYVWSATGDLR--YVLPGHEGSVNHVDFHPHQD--IILSCSSDRTI 334
Score = 27.9 bits (59), Expect = 1.0
Identities = 13/55 (23%), Positives = 26/55 (47%)
Frame = +3
Query: 171 GNLLASCSYDRKVIIWKESGEWTKLYEYTGHESSVNSVAWAPAEYGLILACCSSD 335
G+ AS DR++++W G+ G + ++ + W + ++ C SSD
Sbjct: 62 GSYFASGGMDRQILLWNVFGDVKNYGVLNGCKGAITDLQW--SRDSRVVYCSSSD 114
>SPBC16C6.13c |sec27||coatomer beta' subunit |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 796
Score = 43.2 bits (97), Expect = 3e-05
Identities = 42/163 (25%), Positives = 69/163 (42%), Gaps = 1/163 (0%)
Frame = +3
Query: 51 CSSDN-SVKIYDIKNGTQTLAADLKGHFGPVWQVAWAHPKYGNLLASCSYDRKVIIWKES 227
C SD+ V++Y+ G + + H + + HP LL S S D + +
Sbjct: 73 CGSDDFQVRVYNYNTGEKV--TQFEAHPDYIRALV-VHPTQPFLLTS-SDDMTIKCFNWD 128
Query: 228 GEWTKLYEYTGHESSVNSVAWAPAEYGLILACCSSDGSISIIQYSQDTGNWDVKKITGAH 407
W + + GH V S+A P + + C DG++ + + N+ ++ AH
Sbjct: 129 MSWKCVQTFEGHSRYVMSLAINPKDTNTFASSCL-DGTVKVWSFGSSVANFTLQ----AH 183
Query: 408 AIGVNSISWCPALSADLNLDPLTNKDAPKRLVTGGCDNLIQXW 536
GVN +++ PA D P L+T G DNLI+ W
Sbjct: 184 DRGVNYVNYYPA------------GDKPY-LITAGDDNLIKVW 213
>SPAC343.04c |gnr1||heterotrimeric G protein beta subunit
Gnr1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 507
Score = 42.7 bits (96), Expect = 3e-05
Identities = 31/91 (34%), Positives = 44/91 (48%), Gaps = 1/91 (1%)
Frame = +3
Query: 27 YXGLKLATCSSDNSVKIYDIKNGTQTLAADLKGHFGPVWQVAWAHPKYGNLLASCSYDRK 206
+ G LA+ S D + I+D+ N + L GH V + W+ L SCS D+
Sbjct: 223 HNGRYLASASKDKTAIIFDVVNLKRVFR--LIGHIDTVAYIRWSPDD--RYLLSCSCDKS 278
Query: 207 VIIWKE-SGEWTKLYEYTGHESSVNSVAWAP 296
VI+W +GE KL +Y H SV+ W P
Sbjct: 279 VILWDAFTGE--KLRDYK-HGFSVSCCCWLP 306
Score = 41.9 bits (94), Expect = 6e-05
Identities = 29/105 (27%), Positives = 47/105 (44%)
Frame = +3
Query: 126 HFGPVWQVAWAHPKYGNLLASCSYDRKVIIWKESGEWTKLYEYTGHESSVNSVAWAPAEY 305
H VWQ++++H G LAS S D+ II+ + +++ GH +V + W+P +
Sbjct: 212 HSDEVWQISYSHN--GRYLASASKDKTAIIF-DVVNLKRVFRLIGHIDTVAYIRWSPDDR 268
Query: 306 GLILACCSSDGSISIIQYSQDTGNWDVKKITGAHAIGVNSISWCP 440
L+ C S+I + TG K H V+ W P
Sbjct: 269 YLLSCSCDK----SVILWDAFTGE---KLRDYKHGFSVSCCCWLP 306
>SPBC713.05 |||WD repeat protein, human MAPK organizer 1
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 297
Score = 42.3 bits (95), Expect = 4e-05
Identities = 41/163 (25%), Positives = 75/163 (46%), Gaps = 4/163 (2%)
Frame = +3
Query: 6 IHDAELDYXGLKLATCSSDNSVKIYDIKNGTQTLAADLKGHFGPVWQVAWAHPKYGNLLA 185
I D +L Y K A+C D ++++D+ G + L GH + + + ++LA
Sbjct: 59 ILDLDLVYDSTKFASCGGDKFIQVWDVNTGK--VDRRLGGHLAQINTIRYNEDS--SILA 114
Query: 186 SCSYDRKVIIWK-ESGEWTKLYEYTGHESSVNSVAWAPAEYGLILACCSSDGSISIIQYS 362
S S+D KV +W S ++ + + SV+S+ AE+ ++ S+DG++
Sbjct: 115 SGSFDSKVRLWDCRSNSFSPIQVLADAKDSVSSI--DIAEH--LIVTGSTDGTLRTYDIR 170
Query: 363 QDTGNWDV--KKITGAHAIGVNSISWCPALSADLN-LDPLTNK 482
+ T + D IT S S +L++ ++ LD T K
Sbjct: 171 KGTLSSDYFSHPITSVKTSKSASFSLISSLNSSIHLLDQETGK 213
>SPAC630.14c |tup12||transcriptional corepressor Tup12
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 586
Score = 42.3 bits (95), Expect = 4e-05
Identities = 35/115 (30%), Positives = 53/115 (46%)
Frame = +3
Query: 6 IHDAELDYXGLKLATCSSDNSVKIYDIKNGTQTLAADLKGHFGPVWQVAWAHPKYGNLLA 185
I+ + G L + S D +V ++D++ G Q L H P G +A
Sbjct: 379 IYSLDFSKDGKTLVSGSGDRTVCLWDVEAGEQKLIL----HTDDGVTTVMFSPD-GQFIA 433
Query: 186 SCSYDRKVIIWKESGEWTKLYEYTGHESSVNSVAWAPAEYGLILACCSSDGSISI 350
+ S D+ + IW SG T + + GHE SV SVA++P G L S D +I +
Sbjct: 434 AGSLDKVIRIWTSSG--TLVEQLHGHEESVYSVAFSPD--GKYLVSGSLDNTIKL 484
>SPBC21B10.05c |pop3|wat1|WD repeat protein Pop3|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 314
Score = 40.7 bits (91), Expect = 1e-04
Identities = 27/83 (32%), Positives = 43/83 (51%), Gaps = 1/83 (1%)
Frame = +3
Query: 42 LATCSSDNSVKIYDIKNGTQTLAADLKGHFGPVWQVAWAHPKYGNLLASCSYDRKVIIWK 221
LATCS+D +V I+ ++ + L L+GH VW A++ L + S D +W+
Sbjct: 230 LATCSADATVNIWSTEDMSFMLERRLQGHQRWVWDCAFSAD--STYLVTASSDHVARLWE 287
Query: 222 -ESGEWTKLYEYTGHESSVNSVA 287
SGE + +Y+GH + VA
Sbjct: 288 LSSGE--TIRQYSGHHKAAVCVA 308
Score = 32.7 bits (71), Expect = 0.036
Identities = 27/98 (27%), Positives = 43/98 (43%)
Frame = +3
Query: 39 KLATCSSDNSVKIYDIKNGTQTLAADLKGHFGPVWQVAWAHPKYGNLLASCSYDRKVIIW 218
K + + V++YDI +Q +GH V +A+ H G LA+ S D V +W
Sbjct: 53 KFLAAAGNPHVRLYDINTSSQMPLMTFEGHTNNVTAIAF-HCD-GKWLATSSEDGTVKVW 110
Query: 219 KESGEWTKLYEYTGHESSVNSVAWAPAEYGLILACCSS 332
+ H+S VN + P + G +L+C S
Sbjct: 111 DMRA--PSVQRNYDHKSPVNDLLIHPNQ-GELLSCDQS 145
Score = 31.5 bits (68), Expect = 0.083
Identities = 28/96 (29%), Positives = 44/96 (45%)
Frame = +3
Query: 33 GLKLATCSSDNSVKIYDIKNGTQTLAADLKGHFGPVWQVAWAHPKYGNLLASCSYDRKVI 212
G LAT S D +VK++D++ + D H PV + HP G LL SC +V
Sbjct: 95 GKWLATSSEDGTVKVWDMRAPSVQRNYD---HKSPVNDLL-IHPNQGELL-SCDQSGRVR 149
Query: 213 IWKESGEWTKLYEYTGHESSVNSVAWAPAEYGLILA 320
W + GE + +E E S ++ +++A
Sbjct: 150 AW-DLGENSCTHELIPEEDVPMSSITVGSDGSMLIA 184
>SPAC227.12 |||U4/U6 x U5 tri-snRNP complex subunit Prp4
family|Schizosaccharomyces pombe|chr 1|||Manual
Length = 462
Score = 40.7 bits (91), Expect = 1e-04
Identities = 26/84 (30%), Positives = 41/84 (48%)
Frame = +3
Query: 33 GLKLATCSSDNSVKIYDIKNGTQTLAADLKGHFGPVWQVAWAHPKYGNLLASCSYDRKVI 212
G +LAT S+D++VKI+D++ +LA + H V V + +A+ YD V
Sbjct: 361 GYQLATSSADDTVKIWDLRK--VSLAHTIPAHSSLVSDVRYIESGVNRFIATSGYDGCVK 418
Query: 213 IWKESGEWTKLYEYTGHESSVNSV 284
+W + + GHE V SV
Sbjct: 419 LWNPL-NCSLIKSMVGHEEKVMSV 441
Score = 39.9 bits (89), Expect = 2e-04
Identities = 41/166 (24%), Positives = 77/166 (46%), Gaps = 1/166 (0%)
Frame = +3
Query: 42 LATCSSDNSVKIYDIKNGTQTLAADLKGHFGPVWQVAWAHPKYGNLLASCSYDRKVIIWK 221
L + S D + +++D+ G + L + GH ++ +A P G+L++S D IW
Sbjct: 280 LVSASFDTTWRLWDVHTGVELLMQE--GHSEGIFSIA-CQPD-GSLVSSGGNDAIGRIWD 335
Query: 222 -ESGEWTKLYEYTGHESSVNSVAWAPAEYGLILACCSSDGSISIIQYSQDTGNWDVKKIT 398
SG+ + + H + ++AW+P Y L A S+D ++ I WD++K++
Sbjct: 336 LRSGKSIMVLDE--HIRQIVAMAWSPNGYQL--ATSSADDTVKI---------WDLRKVS 382
Query: 399 GAHAIGVNSISWCPALSADLNLDPLTNKDAPKRLVTGGCDNLIQXW 536
AH I +S +L +D+ + + T G D ++ W
Sbjct: 383 LAHTIPAHS-----SLVSDVR---YIESGVNRFIATSGYDGCVKLW 420
Score = 25.8 bits (54), Expect = 4.1
Identities = 18/59 (30%), Positives = 27/59 (45%)
Frame = +3
Query: 42 LATCSSDNSVKIYDIKNGTQTLAADLKGHFGPVWQVAWAHPKYGNLLASCSYDRKVIIW 218
+AT D VK+++ N + L + GH V V YG+ S YDR + +W
Sbjct: 408 IATSGYDGCVKLWNPLNCS--LIKSMVGHEEKVMSV----DGYGDRFISSGYDRTIKLW 460
>SPBC31F10.13c |hip1|hir1|hira protein Hip1|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 932
Score = 40.3 bits (90), Expect = 2e-04
Identities = 30/102 (29%), Positives = 46/102 (45%), Gaps = 7/102 (6%)
Frame = +3
Query: 84 IKNGTQTLAADLKGHFGPVWQVAW-------AHPKYGNLLASCSYDRKVIIWKESGEWTK 242
I+ GT T +L GH GPV A+ + K +LA DR + IW +
Sbjct: 255 IERGTWTSEINLIGHEGPVEVTAFNPKLFRDKNDKLVCILACGGQDRSLSIWSSALPRPL 314
Query: 243 LYEYTGHESSVNSVAWAPAEYGLILACCSSDGSISIIQYSQD 368
L + S+ V W+P GL L CS DG++ + + ++
Sbjct: 315 LSCQNVFQKSIGDVCWSPD--GLSLFLCSYDGNVLVCTFEKE 354
Score = 25.0 bits (52), Expect = 7.2
Identities = 25/73 (34%), Positives = 32/73 (43%), Gaps = 17/73 (23%)
Frame = +3
Query: 126 HFGPVWQVAWAHPKYGNLLASCSYDRKVIIW-KE-----------SGE-----WTKLYEY 254
H G V V ++ P G LAS S DR VIIW KE SGE W
Sbjct: 73 HTGTVTSVRFS-PN-GQYLASGSDDRVVIIWHKEEAIPGLGSTFGSGEKHTENWRSYRRL 130
Query: 255 TGHESSVNSVAWA 293
GH++ + + W+
Sbjct: 131 LGHDNDIQDLCWS 143
>SPBC1711.07 |||WD repeat protein Rrb1 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 480
Score = 39.5 bits (88), Expect = 3e-04
Identities = 26/108 (24%), Positives = 50/108 (46%), Gaps = 6/108 (5%)
Frame = +3
Query: 45 ATCSSDNSVKIYDIKNGTQTLAADLKGHFGPVWQVAWAHPKYGNLLASCSYDRKVIIW-- 218
++CS D + +I+D++N +T A + H G V + + NLLA+ + + +W
Sbjct: 308 SSCSCDGTFRIWDVRNKQKTSALTVNAHPGVDVNVLSWNTRVPNLLATGADNGVWSVWDL 367
Query: 219 ----KESGEWTKLYEYTGHESSVNSVAWAPAEYGLILACCSSDGSISI 350
S T + + H + + S+ W P E ++ +D IS+
Sbjct: 368 RSLKSSSSVATPVASFKWHRAPIYSIEWHPNE-DSVIGVVGADNQISL 414
Score = 31.9 bits (69), Expect = 0.063
Identities = 18/72 (25%), Positives = 29/72 (40%), Gaps = 1/72 (1%)
Frame = +3
Query: 231 EWTKLYEYTGHESSVNSVAWAPAEYGLILACCSSDGSISIIQYSQDTGNWDVKKITG-AH 407
E + LY H++ ++ W+P EY L+ S D + I G W +H
Sbjct: 235 ENSPLYTVNRHKTEGYALDWSPFEYSLL----SGDNANEIFLTKYSNGGWQTDSSPFLSH 290
Query: 408 AIGVNSISWCPA 443
V + W P+
Sbjct: 291 TAAVEDLQWSPS 302
>SPCC895.06 |||RNA polymerase II elongator complex subunit Elp2
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 760
Score = 39.1 bits (87), Expect = 4e-04
Identities = 28/108 (25%), Positives = 42/108 (38%), Gaps = 1/108 (0%)
Frame = +3
Query: 123 GHFGPVWQVAWAHPKYGNLLASCSYDRKVIIWKE-SGEWTKLYEYTGHESSVNSVAWAPA 299
G G W W +P GN + +WK+ +G+W +L +GH SV VAW P
Sbjct: 324 GSAGGFWGGLW-NPN-GNCVVCWGRTGGWRLWKQDAGQWLQLPSISGHTKSVKGVAWDPE 381
Query: 300 EYGLILACCSSDGSISIIQYSQDTGNWDVKKITGAHAIGVNSISWCPA 443
G +D + + + W H + SIS P+
Sbjct: 382 --GKFYLSAGTDQTTRLFARFKKDNAWHEMARPQIHGYDLTSISCMPS 427
Score = 35.5 bits (78), Expect = 0.005
Identities = 31/117 (26%), Positives = 52/117 (44%), Gaps = 7/117 (5%)
Frame = +3
Query: 111 ADLKGHFGPVWQVAWAHPKYGNLLASCSYDRKVIIWKESGEWTKLYEYTGHESS--VNSV 284
A +K H +W +WA + G A+ S D+ V WK + K+ + + S V +V
Sbjct: 618 ASIKAHSRIIWDASWAPKEMGYFFATASRDKFVKFWKINDN-KKICDVAALQFSDAVTAV 676
Query: 285 AWAPAEYG--LILACCSSDGSISIIQYSQDT-GNWDVKKITG--AHAIGVNSISWCP 440
+AP + L+LA + G I I + ++ W ++ A +N I W P
Sbjct: 677 DFAPFFHNDELLLAVGTEAGKIFIWRCPRENLTKWYPTRLPDHMAPMESINQILWKP 733
Score = 28.3 bits (60), Expect = 0.77
Identities = 17/43 (39%), Positives = 25/43 (58%)
Frame = +3
Query: 258 GHESSVNSVAWAPAEYGLILACCSSDGSISIIQYSQDTGNWDV 386
GHE V SV W P + +IL+ S+D S+ + + +TG W V
Sbjct: 266 GHEDWVMSVDWHPTK-EMILS-SSADSSMIVWEPDTNTGIWVV 306
Score = 26.6 bits (56), Expect = 2.4
Identities = 18/88 (20%), Positives = 36/88 (40%), Gaps = 2/88 (2%)
Frame = +3
Query: 177 LLASCSYDRKVII-WK-ESGEWTKLYEYTGHESSVNSVAWAPAEYGLILACCSSDGSISI 350
++ CS ++ W E T++ +T E A ++G+IL C S I +
Sbjct: 112 VVCGCSNSSCIVYSWNAEQRNLTEISRFTCSEIIPLEFAIVKLDHGIILTVCGSSKKIMV 171
Query: 351 IQYSQDTGNWDVKKITGAHAIGVNSISW 434
++ +K + H V ++S+
Sbjct: 172 YGSDSAISSFKLKAVLRGHLDWVRTLSF 199
Score = 25.8 bits (54), Expect = 4.1
Identities = 25/109 (22%), Positives = 50/109 (45%), Gaps = 5/109 (4%)
Frame = +3
Query: 129 FGPVWQV-AWAHPKYGNLLA-SCSY---DRKVIIWKESGEWTKLYEYTGHESSVNSVAWA 293
FG ++V A A GN+ A SC + VI E+ W + GH +V ++ ++
Sbjct: 528 FGHGYEVYACAISNNGNIAATSCKSQTPEHAVIRLYETQSWNQQQVLKGHSLTVTTIKFS 587
Query: 294 PAEYGLILACCSSDGSISIIQYSQDTGNWDVKKITGAHAIGVNSISWCP 440
P + ++ A D + + + +++ +++ AH+ + SW P
Sbjct: 588 PDDRYILSA--GRDRLVCLHEQAENLLDYNNFASIKAHSRIIWDASWAP 634
>SPBC3D6.12 |||U3 snoRNA associted protein Dip2 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 922
Score = 38.7 bits (86), Expect = 5e-04
Identities = 31/117 (26%), Positives = 50/117 (42%)
Frame = +3
Query: 18 ELDYXGLKLATCSSDNSVKIYDIKNGTQTLAADLKGHFGPVWQVAWAHPKYGNLLASCSY 197
++ Y L TCS+D +VKI+ + G + H + +V + Y +CS
Sbjct: 583 DISYDSKLLVTCSADKNVKIWGLDFG--DCHKSIFAHQDSIMEVTFQPDTYN--FFTCSK 638
Query: 198 DRKVIIWKESGEWTKLYEYTGHESSVNSVAWAPAEYGLILACCSSDGSISIIQYSQD 368
DR+V W + + + + GH S V WA A + S D SI + + D
Sbjct: 639 DREVRYW-DGKSFDLILKLRGHHSEV----WALAVGPTFVVSGSHDHSIRLWEQGDD 690
Score = 31.1 bits (67), Expect = 0.11
Identities = 23/76 (30%), Positives = 37/76 (48%)
Frame = +3
Query: 57 SDNSVKIYDIKNGTQTLAADLKGHFGPVWQVAWAHPKYGNLLASCSYDRKVIIWKESGEW 236
+D S++++ K+G L L GH V + + K G LAS S D +I+W E
Sbjct: 84 ADGSIRLW--KDGE--LLITLNGHKSAVTTMDF--DKMGTRLASGSMDTDIIVWDIVAE- 136
Query: 237 TKLYEYTGHESSVNSV 284
T L+ GH+ + +
Sbjct: 137 TGLFRLRGHKDQITKL 152
>SPAC4F8.11 |||WD repeat protein, human WDR24
family|Schizosaccharomyces pombe|chr 1|||Manual
Length = 846
Score = 38.7 bits (86), Expect = 5e-04
Identities = 29/111 (26%), Positives = 52/111 (46%), Gaps = 6/111 (5%)
Frame = +3
Query: 33 GLKLATCSSDNSVKIYDIKNGTQTLAADLKGHFGPV----WQVAWAHPKYGNLLASCSY- 197
G+ LA+C D +++I+D + + + + P+ W+ A + N LAS S
Sbjct: 233 GVFLASCGRDKTIRIWDSTSNKKKSLITI-NNVSPLNCVRWRPANQQSRGSNQLASSSLV 291
Query: 198 -DRKVIIWKESGEWTKLYEYTGHESSVNSVAWAPAEYGLILACCSSDGSIS 347
D + +W + + + H+S V+++ WA E +L CS DG S
Sbjct: 292 GDTAINVWDITRPYIPYRTVSCHDSIVSTMHWASTE---LLWSCSKDGIFS 339
Score = 31.9 bits (69), Expect = 0.063
Identities = 21/61 (34%), Positives = 28/61 (45%)
Frame = +3
Query: 117 LKGHFGPVWQVAWAHPKYGNLLASCSYDRKVIIWKESGEWTKLYEYTGHESSVNSVAWAP 296
L H G V V ++ P G LASC D+ + IW + K + S +N V W P
Sbjct: 217 LAAHNGVVLCVNYS-PN-GVFLASCGRDKTIRIWDSTSNKKKSLITINNVSPLNCVRWRP 274
Query: 297 A 299
A
Sbjct: 275 A 275
>SPAC821.08c |slp1||sleepy homolog Slp1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 488
Score = 38.7 bits (86), Expect = 5e-04
Identities = 26/91 (28%), Positives = 42/91 (46%)
Frame = +3
Query: 42 LATCSSDNSVKIYDIKNGTQTLAADLKGHFGPVWQVAWAHPKYGNLLASCSYDRKVIIWK 221
L++ S ++ +D++ + L+GH V +AW G LAS D V IW
Sbjct: 276 LSSGSRSGAIHHHDVRIANHQIGT-LQGHSSEVCGLAWRSD--GLQLASGGNDNVVQIWD 332
Query: 222 ESGEWTKLYEYTGHESSVNSVAWAPAEYGLI 314
K + T H ++V +VAW P + L+
Sbjct: 333 ARSSIPK-FTKTNHNAAVKAVAWCPWQSNLL 362
Score = 37.1 bits (82), Expect = 0.002
Identities = 32/112 (28%), Positives = 51/112 (45%), Gaps = 2/112 (1%)
Frame = +3
Query: 33 GLKLATCSSDNSVKIYDIKNGTQTLAADLKGHFGPVWQVAWAHPKYGNLLAS--CSYDRK 206
GL+LA+ +DN V+I+D ++ H V VAW P NLLA+ + D++
Sbjct: 316 GLQLASGGNDNVVQIWDARSSIPKFTK--TNHNAAVKAVAWC-PWQSNLLATGGGTMDKQ 372
Query: 207 VIIWKESGEWTKLYEYTGHESSVNSVAWAPAEYGLILACCSSDGSISIIQYS 362
+ W + G S V S+ W+P ++ D ++SI YS
Sbjct: 373 IHFWNAATGARVNTVDAG--SQVTSLIWSPHSKEIMSTHGFPDNNLSIWSYS 422
Score = 29.5 bits (63), Expect = 0.34
Identities = 35/139 (25%), Positives = 60/139 (43%), Gaps = 1/139 (0%)
Frame = +3
Query: 27 YXGLKLATCSSDNSVKIYDIKNGTQTLAADLKGHFGPVWQVAWAHPKYGNLLASCSYDRK 206
+ G L+ + V IYD+++ QT + GH V ++W ++L+S S
Sbjct: 231 HDGSFLSVGLGNGLVDIYDVES--QTKLRTMAGHQARVGCLSWNR----HVLSSGSRSGA 284
Query: 207 VIIWKESGEWTKLYEYTGHESSVNSVAWAPAEYGLILACCSSDGSISIIQYSQDTGNWDV 386
+ ++ GH S V +AW GL LA S G+ +++Q + +
Sbjct: 285 IHHHDVRIANHQIGTLQGHSSEVCGLAWRSD--GLQLA---SGGNDNVVQIWDARSS--I 337
Query: 387 KKITGA-HAIGVNSISWCP 440
K T H V +++WCP
Sbjct: 338 PKFTKTNHNAAVKAVAWCP 356
Score = 29.1 bits (62), Expect = 0.44
Identities = 39/172 (22%), Positives = 74/172 (43%)
Frame = +3
Query: 21 LDYXGLKLATCSSDNSVKIYDIKNGTQTLAADLKGHFGPVWQVAWAHPKYGNLLASCSYD 200
LD+ L + + + +V +++ +G+ + A+ V V W+H G+ L+ +
Sbjct: 186 LDWSNLNVVAVALERNVYVWNADSGSVSALAETD-ESTYVASVKWSHD--GSFLSVGLGN 242
Query: 201 RKVIIWKESGEWTKLYEYTGHESSVNSVAWAPAEYGLILACCSSDGSISIIQYSQDTGNW 380
V I+ + TKL GH++ V ++W +L+ S G+I + N
Sbjct: 243 GLVDIYDVESQ-TKLRTMAGHQARVGCLSWNRH----VLSSGSRSGAIH--HHDVRIANH 295
Query: 381 DVKKITGAHAIGVNSISWCPALSADLNLDPLTNKDAPKRLVTGGCDNLIQXW 536
+ + G H+ V ++W D L +L +GG DN++Q W
Sbjct: 296 QIGTLQG-HSSEVCGLAW--------RSDGL-------QLASGGNDNVVQIW 331
>SPBC887.04c |lub1||WD repeat protein Lub1|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 713
Score = 37.5 bits (83), Expect = 0.001
Identities = 34/102 (33%), Positives = 50/102 (49%)
Frame = +3
Query: 45 ATCSSDNSVKIYDIKNGTQTLAADLKGHFGPVWQVAWAHPKYGNLLASCSYDRKVIIWKE 224
A+CS+D +K++ +G +L GH V+ + + H + L+ASC DR + IWK
Sbjct: 190 ASCSNDGVIKLWT-SDGE--FLYELHGHTSFVYSLTYIHNQ--QLIASCGEDRTIRIWKG 244
Query: 225 SGEWTKLYEYTGHESSVNSVAWAPAEYGLILACCSSDGSISI 350
L T +SV SV+ P L C SSDG + I
Sbjct: 245 K---ECLQCITLPTTSVWSVSSLP---NGDLVCGSSDGFVRI 280
Score = 35.1 bits (77), Expect = 0.007
Identities = 17/42 (40%), Positives = 24/42 (57%), Gaps = 1/42 (2%)
Frame = +3
Query: 177 LLASCSYDRKVIIWKE-SGEWTKLYEYTGHESSVNSVAWAPA 299
L+ S S D +W++ +GEWT + Y HE VN V + PA
Sbjct: 27 LIGSASRDGTYSVWEQINGEWTPHF-YENHEGFVNCVCYVPA 67
>SPAC17H9.19c |cdt2|sev1|WD repeat protein Cdt2|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 490
Score = 37.5 bits (83), Expect = 0.001
Identities = 31/122 (25%), Positives = 52/122 (42%), Gaps = 19/122 (15%)
Frame = +3
Query: 42 LATCSSDNSVKIYDIKNGTQTLAADLKG----HFGPVWQVAWAHPKYGNLLASCSYDRKV 209
LAT S D + K++D+ +G H V QV + + NL+ SCS D +
Sbjct: 195 LATSSGDQTSKVFDLSTQQCITRLGRRGVDGYHSHSVKQVNFCNDSPYNLV-SCSRDGSI 253
Query: 210 IIWKE-------SGEW--------TKLYEYTGHESSVNSVAWAPAEYGLILACCSSDGSI 344
I W GE K +E +G + S+ S W P +++ CS++ ++
Sbjct: 254 IFWDMRTHGITIDGEHFQKPVLRIRKAHENSGRDCSITSATWLPQSTSQVISSCSANSAL 313
Query: 345 SI 350
+
Sbjct: 314 KL 315
>SPBC16A3.05c |rae1||RNA export factor Rae1|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 352
Score = 37.5 bits (83), Expect = 0.001
Identities = 32/112 (28%), Positives = 54/112 (48%), Gaps = 2/112 (1%)
Frame = +3
Query: 42 LATCSSDNSVKIYDIKNGTQTLAADLKGHFGPVWQVAWAHPKYGNLLASCSYDRKVIIWK 221
LA S D+ V+IY+++ Q++ L H GPV V W+ + G +AS S D+ ++
Sbjct: 45 LAASSWDSKVRIYEVQATGQSIGKALYEHQGPVLSVNWS--RDGTKVASGSVDKSAKVFD 102
Query: 222 -ESGEWTKLYEYTGHESSVNSVAWAPA-EYGLILACCSSDGSISIIQYSQDT 371
++G+ + H+ +V V + A ILA S D ++ Q T
Sbjct: 103 IQTGQ---NQQVAAHDDAVRCVRFVEAMGTSPILATGSWDKTLKYWDLRQST 151
>SPBC8D2.20c |sec31||COPII-coated vesicle component Sec31
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1224
Score = 36.3 bits (80), Expect = 0.003
Identities = 34/140 (24%), Positives = 56/140 (40%), Gaps = 7/140 (5%)
Frame = +3
Query: 42 LATCSSDNSVKIYDIKNGTQTLAADLKGHFGPVWQVAWAHPKYGNLLASCSYDRKVIIWK 221
LA+ + V ++DIK+ Q A + V V+W + K ++LAS + +W
Sbjct: 133 LASGDNKGDVWVWDIKHPQQPFALPKQNRSSEVHVVSW-NNKVSHILASGNATEYTTVWD 191
Query: 222 ESGEWTKL-YEYTG------HESSVNSVAWAPAEYGLILACCSSDGSISIIQYSQDTGNW 380
+ L Y G +VNS+AW P + + + I+ +
Sbjct: 192 VKLKRQVLNLSYLGAAGVSAATGAVNSIAWHPNNATRLATAIDDNRNPIILTWDLRQPTV 251
Query: 381 DVKKITGAHAIGVNSISWCP 440
+TG H S+SWCP
Sbjct: 252 PQNILTG-HQKAALSLSWCP 270
Score = 34.3 bits (75), Expect = 0.012
Identities = 37/156 (23%), Positives = 65/156 (41%), Gaps = 9/156 (5%)
Frame = +3
Query: 42 LATCSSDNSVKIYDIKNGTQTL------AADLKGHFGPVWQVAWAHPKYGNLLASCSYDR 203
LA+ ++ ++D+K Q L AA + G V +AW HP LA+ D
Sbjct: 178 LASGNATEYTTVWDVKLKRQVLNLSYLGAAGVSAATGAVNSIAW-HPNNATRLATAIDDN 236
Query: 204 K---VIIWKESGEWTKLYEYTGHESSVNSVAWAPAEYGLILACCSSDGSISIIQYSQDTG 374
+ ++ W TGH+ + S++W P + +L+ DG + ++ +TG
Sbjct: 237 RNPIILTWDLRQPTVPQNILTGHQKAALSLSWCPEDPTFLLS-SGKDGRAMV--WNVETG 293
Query: 375 NWDVKKITGAHAIGVNSISWCPALSADLNLDPLTNK 482
+ + S SWCP+ S + + L K
Sbjct: 294 E-SLGSFPRSGNWYTKS-SWCPSNSNRVAVASLEGK 327
>SPAC4D7.03 |pop2|sud1|F-box/WD repeat protein
Pop2|Schizosaccharomyces pombe|chr 1|||Manual
Length = 703
Score = 35.9 bits (79), Expect = 0.004
Identities = 26/69 (37%), Positives = 33/69 (47%), Gaps = 1/69 (1%)
Frame = +3
Query: 168 YGNLLASCSYDRKVIIWKES-GEWTKLYEYTGHESSVNSVAWAPAEYGLILACCSSDGSI 344
YG++L S SYD + IW+ S GE LY GH + SV + P I S D SI
Sbjct: 516 YGDILVSGSYDSSIRIWRVSTGEC--LYHLRGHSLRIYSVLYEPERN--ICISGSMDKSI 571
Query: 345 SIIQYSQDT 371
+ S T
Sbjct: 572 RVWDLSTGT 580
Score = 30.7 bits (66), Expect = 0.15
Identities = 24/80 (30%), Positives = 39/80 (48%), Gaps = 1/80 (1%)
Frame = +3
Query: 39 KLATCSSDNSVKIYDIKNGTQTLAADLKGHFGPVWQVAWAHPKYGNLLASCSYDRKVIIW 218
++ T S +++I++ G L A L+GH VW V + N L S S D+ V +W
Sbjct: 363 RIITTSGSGTIQIHNAITGV--LEARLEGHKEGVWAVKI----HENTLVSGSIDKTVRVW 416
Query: 219 K-ESGEWTKLYEYTGHESSV 275
E + T ++ GH S +
Sbjct: 417 NIEKAKCTHIFR--GHISII 434
>SPAC23C4.02 |crn1||actin binding protein, coronin
Crn1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 601
Score = 35.5 bits (78), Expect = 0.005
Identities = 25/86 (29%), Positives = 39/86 (45%), Gaps = 9/86 (10%)
Frame = +3
Query: 120 KGHFGPVWQVAWAHPKYGNLLASCSYDRKVIIWKESGEWTKLYEY---------TGHESS 272
+GH V W +P + +LAS D K++IWK ++T + Y GH
Sbjct: 78 RGHTAAVLDTDW-NPFHDQVLASGGDDSKIMIWKVPEDYTVMEPYEDVHPIAELKGHSRK 136
Query: 273 VNSVAWAPAEYGLILACCSSDGSISI 350
V V + P +LA S+D +I +
Sbjct: 137 VGLVQYHPTAAN-VLASSSADNTIKL 161
Score = 31.5 bits (68), Expect = 0.083
Identities = 16/36 (44%), Positives = 21/36 (58%)
Frame = +3
Query: 111 ADLKGHFGPVWQVAWAHPKYGNLLASCSYDRKVIIW 218
A+LKGH V V + HP N+LAS S D + +W
Sbjct: 128 AELKGHSRKVGLVQY-HPTAANVLASSSADNTIKLW 162
>SPBC713.04c |||U3 snoRNP-associated protein
Utp1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 854
Score = 35.1 bits (77), Expect = 0.007
Identities = 35/120 (29%), Positives = 57/120 (47%), Gaps = 2/120 (1%)
Frame = +3
Query: 39 KLATCSSDNSVKIYDIKNGTQTLAADLKGHFGPVWQVAWAHPKYGNLLASCSYDRKVIIW 218
++ S +S +I+ T L L GH GPV +++ G+LLAS S+D+ V IW
Sbjct: 437 EIVCAGSQDSFEIFMWSVQTGQLLETLAGHEGPVSSLSFNSS--GSLLASGSWDKTVRIW 494
Query: 219 KESGEWTKLYEYTGHESSVNSVAWAPAEYGLILACCSSDGSISI--IQYSQDTGNWDVKK 392
+ + + E S V S+A+ P G + S DG ++ +Q + T D +K
Sbjct: 495 -DIFSRSGIVEPLPIPSDVLSLAFHPD--GKEVCVASLDGQLTFWNVQEGKQTSLIDGRK 551
>SPBC354.03 |swd3||WD repeat protein Swd3|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 380
Score = 34.7 bits (76), Expect = 0.009
Identities = 32/103 (31%), Positives = 47/103 (45%)
Frame = +3
Query: 42 LATCSSDNSVKIYDIKNGTQTLAADLKGHFGPVWQVAWAHPKYGNLLASCSYDRKVIIWK 221
LA+ S D +++I+D + LKGH V + + +P G LL S S+D V IW
Sbjct: 111 LASASDDKTIRIWDFEKRCSVRC--LKGHTNYVSSIDF-NP-LGTLLVSGSWDETVRIWN 166
Query: 222 ESGEWTKLYEYTGHESSVNSVAWAPAEYGLILACCSSDGSISI 350
+ T L H + SV+ + G + A S DG I
Sbjct: 167 LQ-DGTCLRMLPAHSEPIISVSISAD--GTLCATASYDGMARI 206
>SPAC57A10.05c |pof1||F-box protein Pof1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 605
Score = 34.3 bits (75), Expect = 0.012
Identities = 27/88 (30%), Positives = 43/88 (48%)
Frame = +3
Query: 39 KLATCSSDNSVKIYDIKNGTQTLAADLKGHFGPVWQVAWAHPKYGNLLASCSYDRKVIIW 218
+L +CS D ++K +DI+ + L GH VW++A H + L S ++D V +W
Sbjct: 446 RLFSCSLDGTIKQWDIEK--KKCVHTLFGHIEGVWEIAADHLR----LISGAHDGVVKVW 499
Query: 219 KESGEWTKLYEYTGHESSVNSVAWAPAE 302
E+ E ++ H V SVA E
Sbjct: 500 -EACEC--VHTLKNHSEPVTSVALGDCE 524
>SPAC9G1.05 |||actin cortical patch component Aip1
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 595
Score = 33.5 bits (73), Expect = 0.021
Identities = 26/88 (29%), Positives = 46/88 (52%), Gaps = 2/88 (2%)
Frame = +3
Query: 39 KLATCSSDNSVKIYDIKNGTQ-TLAADLKGHFGPVWQVAWAHPKYGNLLASCSYDRKVII 215
+ AT S DNS+ + +GT L+ H V+ V ++ P AS D KV +
Sbjct: 161 RAATASDDNSINFF---HGTPYRFNRSLRVHSKFVYDVRYS-PN-DERFASAGADGKVYV 215
Query: 216 WK-ESGEWTKLYEYTGHESSVNSVAWAP 296
+ ++G+ ++YE H+ S+ S++W+P
Sbjct: 216 FDGKTGD--QVYEIDAHKGSIFSISWSP 241
Score = 31.5 bits (68), Expect = 0.083
Identities = 15/68 (22%), Positives = 30/68 (44%)
Frame = +3
Query: 6 IHDAELDYXGLKLATCSSDNSVKIYDIKNGTQTLAADLKGHFGPVWQVAWAHPKYGNLLA 185
++D + A+ +D V ++D K G Q D H G ++ ++W+ + +
Sbjct: 192 VYDVRYSPNDERFASAGADGKVYVFDGKTGDQVYEID--AHKGSIFSISWSPDSSQFVTS 249
Query: 186 SCSYDRKV 209
S Y K+
Sbjct: 250 SAGYSCKI 257
>SPBC1718.01 |pop1|ste16, SPBC2G2.18|F-box/WD repeat protein
Pop1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 775
Score = 32.3 bits (70), Expect = 0.048
Identities = 27/78 (34%), Positives = 36/78 (46%)
Frame = +3
Query: 117 LKGHFGPVWQVAWAHPKYGNLLASCSYDRKVIIWKESGEWTKLYEYTGHESSVNSVAWAP 296
L+GH V +VA G+L+ S SYD + +WK S L+ GH V SV P
Sbjct: 573 LRGHTDSVREVACL----GDLIVSASYDGTLRVWKAS-TGVCLHVLRGHVGRVYSVTINP 627
Query: 297 AEYGLILACCSSDGSISI 350
+ I A +D I I
Sbjct: 628 SRQQCISA--GTDAKIRI 643
>SPAC29E6.01 |pof11|SPAC30.05, mug156|F-box protein
Pof11|Schizosaccharomyces pombe|chr 1|||Manual
Length = 506
Score = 31.9 bits (69), Expect = 0.063
Identities = 24/77 (31%), Positives = 36/77 (46%)
Frame = +3
Query: 54 SSDNSVKIYDIKNGTQTLAADLKGHFGPVWQVAWAHPKYGNLLASCSYDRKVIIWKESGE 233
S D +V ++D+ + + + L GH G V + + + NLL S S D +IIW
Sbjct: 238 SKDRTVSVWDVNS--RFILYKLYGHSGSVLCLDFCRRR--NLLVSGSSDSTIIIWDWQNR 293
Query: 234 WTKLYEYTGHESSVNSV 284
L Y GH +V V
Sbjct: 294 -RPLKVYFGHTDNVLGV 309
>SPBC428.19c |||U3 snoRNP protein Utp15 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 494
Score = 31.1 bits (67), Expect = 0.11
Identities = 23/77 (29%), Positives = 36/77 (46%)
Frame = +3
Query: 69 VKIYDIKNGTQTLAADLKGHFGPVWQVAWAHPKYGNLLASCSYDRKVIIWKESGEWTKLY 248
V+I+D+ T+++ L H PV V P S S D+ V +W S + Y
Sbjct: 105 VQIFDLS--TRSILRALDAHQFPV-HVTQFCPYANTTFLSGSDDKTVKVWDLSTGAVQ-Y 160
Query: 249 EYTGHESSVNSVAWAPA 299
+ +GHE V + +W A
Sbjct: 161 DLSGHEDYVRTASWMSA 177
>SPAC17D4.01 |pex7|SPAC1834.12|peroxin-7 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 308
Score = 31.1 bits (67), Expect = 0.11
Identities = 19/59 (32%), Positives = 29/59 (49%)
Frame = +3
Query: 42 LATCSSDNSVKIYDIKNGTQTLAADLKGHFGPVWQVAWAHPKYGNLLASCSYDRKVIIW 218
LAT S D + +I+D + + DL F V V W+ G+ +AS +D + IW
Sbjct: 249 LATASYDMTSRIFDPEQHSCIRKVDLHSEF--VRDVDWSDFGDGSWIASVGWDESLYIW 305
>SPBP22H7.07 |prp5|cwf1|WD repeat protein Prp5|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 473
Score = 31.1 bits (67), Expect = 0.11
Identities = 15/32 (46%), Positives = 19/32 (59%), Gaps = 1/32 (3%)
Frame = +3
Query: 6 IHDAELDYXGLKLATCSSDNSVKIY-DIKNGT 98
I + D GL+L TC +D SVKIY + N T
Sbjct: 424 IFASSFDKTGLRLITCEADKSVKIYKQVDNAT 455
>SPAC824.04 |||WD repeat protein|Schizosaccharomyces pombe|chr
1|||Manual
Length = 341
Score = 30.7 bits (66), Expect = 0.15
Identities = 30/120 (25%), Positives = 59/120 (49%), Gaps = 4/120 (3%)
Frame = +3
Query: 48 TCSSDNSVKIYDIKNGTQTLAADLKGHFGPVWQVA-WAHPKYGNLLASCSYDRKVIIWKE 224
TCS+D++V+IYD + Q F +VA + H + NLL S + K I +
Sbjct: 39 TCSADDTVQIYDALDPKQVHTITC---FETGIEVARFTHHDH-NLLLSTTKGNKDIQYVS 94
Query: 225 SGEWTKLYEYTGHESSVNSVAWAPAEYGLILACCSSDGSISIIQYSQDT---GNWDVKKI 395
+ ++ ++GH V+S+ +P E + ++D ++ + + +Q + GN D+ +
Sbjct: 95 IYDNKRISYFSGHTDIVSSIEVSPIEDQFV--STANDKTLKLWKMNQSSRCLGNLDLPSL 152
>SPAC6B12.15 |cpc2|rkp1|RACK1 homologue Cpc2|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 314
Score = 30.7 bits (66), Expect = 0.15
Identities = 24/115 (20%), Positives = 45/115 (39%)
Frame = +3
Query: 6 IHDAELDYXGLKLATCSSDNSVKIYDIKNGTQTLAADLKGHFGPVWQVAWAHPKYGNLLA 185
+ D L + + S D +++++D++ G T GH V V+ + +
Sbjct: 66 VSDCALSFDSHYALSASWDKTIRLWDLEKGECT--HQFVGHTSDVLSVSISPDN--RQVV 121
Query: 186 SCSYDRKVIIWKESGEWTKLYEYTGHESSVNSVAWAPAEYGLILACCSSDGSISI 350
S S D+ + IW G GH V+ V ++P L D ++ +
Sbjct: 122 SGSRDKTIKIWNIIGNCKYTITDGGHSDWVSCVRFSPNPDNLTFVSAGWDKAVKV 176
>SPCC16A11.02 |utp13|SPCC63.16|U3 snoRNP-associated protein Utp13
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 777
Score = 30.3 bits (65), Expect = 0.19
Identities = 38/148 (25%), Positives = 65/148 (43%), Gaps = 12/148 (8%)
Frame = +3
Query: 33 GLKLATCSSDNSVKIY--DIKNGTQTLAADLKGHFGPVWQVAWAH---PKYGNLLASCSY 197
G+ LAT + DN+V+++ +I++ GH V VA Y LAS S
Sbjct: 376 GVWLATGAKDNTVRLWNLNIEDNVYKCIHVFTGHTASVTAVALGPLDVNGYPTFLASSSQ 435
Query: 198 DRKVIIWKESGEWTK-------LYEYTGHESSVNSVAWAPAEYGLILACCSSDGSISIIQ 356
DR + + + K ++ H+ VN++ ++ G I+A S D +I +
Sbjct: 436 DRTLKRFNLGSQLNKSDFSNRAVWTIKAHDRDVNAI--QVSKDGRIIASASQDKTIKL-- 491
Query: 357 YSQDTGNWDVKKITGAHAIGVNSISWCP 440
+ TG +V + H GV + S+ P
Sbjct: 492 WDSSTG--EVVGVLRGHRRGVWACSFNP 517
>SPBC32F12.02 |rec14||recombination protein
Rec14|Schizosaccharomyces pombe|chr 2|||Manual
Length = 302
Score = 29.9 bits (64), Expect = 0.25
Identities = 37/146 (25%), Positives = 66/146 (45%), Gaps = 4/146 (2%)
Frame = +3
Query: 33 GLKLATCSSDNSVKIYDIKNGTQTLAADLKGHFGPVWQVAWAHPKYGNLLASCSYDRKVI 212
G +A S D + ++D + + D KG FG + P +++ + +
Sbjct: 115 GQTIAFTSVDGRIAVWDNPSDCKISELDTKGKFGLCIDYS---PNGRFIVSGHQTGQLFL 171
Query: 213 IWKESGEWTKLYEYTGHESSVNSVAWAPAEYGLILACCSSDGSISIIQYSQDTGNWDVKK 392
I E+G + +GH S V SVA++P +LA I+I Y +G+ V +
Sbjct: 172 ISTETGRL--FHVLSGHTSPVRSVAFSPG--STLLAAAGDSKMITI--YDVLSGD-QVGQ 224
Query: 393 ITGAHAIGVNSISWCPA----LSADL 458
+ G HA + ++++ P LSAD+
Sbjct: 225 LRG-HAAWIFAVAFNPVGDLLLSADV 249
>SPBC577.09 |||ERCC-8 homolog |Schizosaccharomyces pombe|chr
2|||Manual
Length = 404
Score = 29.5 bits (63), Expect = 0.34
Identities = 24/79 (30%), Positives = 38/79 (48%), Gaps = 13/79 (16%)
Frame = +3
Query: 42 LATCSSDNSVKIYDIKNGTQTLAA-DLKG-----------HFGPVWQVAWAHPKYGNLLA 185
LA+ S+D + +++DI+ + + A DL H+G V +AW LA
Sbjct: 205 LASGSADGTCRLWDIRKVSSSFACMDLHNKYLPSNQTNISHYGTVNGLAWTSD--ARYLA 262
Query: 186 SCSYDRKVIIWK-ESGEWT 239
SC D ++ +W ESG T
Sbjct: 263 SCGTDDRIRVWNMESGRNT 281
>SPAC26H5.03 |||WD repeat protein Cac2|Schizosaccharomyces pombe|chr
1|||Manual
Length = 512
Score = 28.3 bits (60), Expect = 0.77
Identities = 21/64 (32%), Positives = 32/64 (50%), Gaps = 5/64 (7%)
Frame = +3
Query: 174 NLLASCSYDRKVIIWK-ESGEWTKLYEY----TGHESSVNSVAWAPAEYGLILACCSSDG 338
N A+C D K+ IW+ + E + EY + H +VN V + P G ILA +G
Sbjct: 32 NKFATCGGDSKIRIWQLITSESSTKVEYLSTLSRHTQAVNVVRFNPE--GNILATAGDEG 89
Query: 339 SISI 350
+I +
Sbjct: 90 TIML 93
>SPBC21H7.05 |sfc6||transcription factor TFIIIC complex subunit
Sfc6|Schizosaccharomyces pombe|chr 2|||Manual
Length = 582
Score = 27.9 bits (59), Expect = 1.0
Identities = 15/58 (25%), Positives = 33/58 (56%)
Frame = +3
Query: 180 LASCSYDRKVIIWKESGEWTKLYEYTGHESSVNSVAWAPAEYGLILACCSSDGSISII 353
+ SCS + V+I G T+L + E + + ++ + +++ +AC +SDG ++I+
Sbjct: 436 IISCSESQSVVIESLRGTSTQLLD----ERNGSIISLSNSKFHPFVACAASDGIVTIV 489
>SPAC2E1P5.05 |||U3 snoRNP-associated protein Rrp9
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 524
Score = 27.9 bits (59), Expect = 1.0
Identities = 12/29 (41%), Positives = 16/29 (55%)
Frame = +3
Query: 135 PVWQVAWAHPKYGNLLASCSYDRKVIIWK 221
P W + A Y NL AS S+D + +WK
Sbjct: 411 PRWITSLAAIPYSNLFASGSWDGNIRLWK 439
>SPAC11G7.02 |pub1||ubiquitin-protein ligase E3|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 767
Score = 27.5 bits (58), Expect = 1.4
Identities = 9/16 (56%), Positives = 13/16 (81%)
Frame = -1
Query: 168 TWDEPKLPATRGQNDP 121
TWD+P+LP++ QN P
Sbjct: 372 TWDDPRLPSSLDQNVP 387
>SPAC664.15 |||CCR4-Not complex subunit Caf4/Mdv1
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 651
Score = 27.5 bits (58), Expect = 1.4
Identities = 27/87 (31%), Positives = 43/87 (49%)
Frame = +3
Query: 42 LATCSSDNSVKIYDIKNGTQTLAADLKGHFGPVWQVAWAHPKYGNLLASCSYDRKVIIWK 221
LAT S+D +VK++D+ G L + LKGH V +A + +A+ S D V +W
Sbjct: 347 LATASTDKTVKVWDMA-GVVYLGS-LKGHSDYVSCLA----IQDSFIATGSMDTTVRLWN 400
Query: 222 ESGEWTKLYEYTGHESSVNSVAWAPAE 302
+ L++ E S+NS P +
Sbjct: 401 LDND--VLHKDNPVEESLNSPPDQPVD 425
Score = 24.6 bits (51), Expect = 9.5
Identities = 10/28 (35%), Positives = 19/28 (67%)
Frame = +3
Query: 15 AELDYXGLKLATCSSDNSVKIYDIKNGT 98
+ L + L + S DNSV+I+D+++G+
Sbjct: 540 SSLQFDSNHLYSGSYDNSVRIWDLRSGS 567
>SPBC17D11.08 |||WD repeat protein, human WDR68
family|Schizosaccharomyces pombe|chr 2|||Manual
Length = 435
Score = 27.5 bits (58), Expect = 1.4
Identities = 13/36 (36%), Positives = 17/36 (47%)
Frame = +3
Query: 258 GHESSVNSVAWAPAEYGLILACCSSDGSISIIQYSQ 365
GH+ VN+V W P LA C D +S+ Q
Sbjct: 313 GHKGDVNAVKWMPGSKSK-LATCGDDCVVSLWDLDQ 347
>SPCC16C4.08c |skb15||Shk1 kinase binding protein
15|Schizosaccharomyces pombe|chr 3|||Manual
Length = 341
Score = 27.5 bits (58), Expect = 1.4
Identities = 20/91 (21%), Positives = 38/91 (41%), Gaps = 1/91 (1%)
Frame = +3
Query: 33 GLKLATCSSDNSVKIYDIKNGTQTLAADLKGHFGPVWQVAWAHPKYGNLLASCSYDRKVI 212
G+ LA+ SSD ++KI+D Q + K N L +C + ++
Sbjct: 45 GIYLASTSSDETIKIFDHTRNVQIADVSVPTDIANACIRDMCFTK--NHLLACHDNGQIS 102
Query: 213 IWKESGEWTKLYEY-TGHESSVNSVAWAPAE 302
+W + G W ++ + + +A P+E
Sbjct: 103 MWSK-GSWLLVHTLKSSSHKGITGIAVHPSE 132
>SPAC13C5.06c |mug121||sequence orphan|Schizosaccharomyces pombe|chr
1|||Manual
Length = 177
Score = 27.1 bits (57), Expect = 1.8
Identities = 15/41 (36%), Positives = 21/41 (51%), Gaps = 7/41 (17%)
Frame = +3
Query: 153 WAHPKYGNLL-ASCSYDRKVIIWKESGE------WTKLYEY 254
W PKYGN+L ++C + V + E W KLY+Y
Sbjct: 34 WNVPKYGNVLDSNCQGQKPVTFFGSVTEHVSNSWWIKLYDY 74
>SPAC25H1.08c |||ribosome biogenesis protein
Sqt1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 399
Score = 27.1 bits (57), Expect = 1.8
Identities = 17/62 (27%), Positives = 29/62 (46%)
Frame = +3
Query: 33 GLKLATCSSDNSVKIYDIKNGTQTLAADLKGHFGPVWQVAWAHPKYGNLLASCSYDRKVI 212
GL LA +D S+ ++ + +G + + GH PV + P G LA+ +I
Sbjct: 158 GLFLAAGCNDGSIWMWSLPSGK--VVQVMYGHTAPVNAGKFIPPGVGKRLATVDDSGTLI 215
Query: 213 IW 218
+W
Sbjct: 216 VW 217
>SPBC646.17c |dic1|SPBC855.01c, SPBP35G2.01c, mug44|dynein
intermediate chain Dic1|Schizosaccharomyces pombe|chr
2|||Manual
Length = 544
Score = 26.6 bits (56), Expect = 2.4
Identities = 11/33 (33%), Positives = 17/33 (51%)
Frame = +3
Query: 123 GHFGPVWQVAWAHPKYGNLLASCSYDRKVIIWK 221
GH PV + + + N + +CS D V IW+
Sbjct: 289 GHLEPVTDITYINNPPSNNIVTCSTDGLVHIWE 321
>SPCC1620.04c |mug55||Cdc20/Fizzy family WD repeat
protein|Schizosaccharomyces pombe|chr 3|||Manual
Length = 509
Score = 26.6 bits (56), Expect = 2.4
Identities = 20/93 (21%), Positives = 38/93 (40%)
Frame = +3
Query: 156 AHPKYGNLLASCSYDRKVIIWKESGEWTKLYEYTGHESSVNSVAWAPAEYGLILACCSSD 335
A+ G LA + V IW + + H+ ++ +AW+P + L++ S
Sbjct: 208 AYSSDGGFLAIARVNGFVEIWNRKTKNNRCDYKFHHDGDISCMAWSPINWTLLVG--GST 265
Query: 336 GSISIIQYSQDTGNWDVKKITGAHAIGVNSISW 434
G+I + + ++ V I H V + W
Sbjct: 266 GNIYVYRRTKSMMR-RVHTIKKVHQEQVCGLEW 297
>SPBC6B1.10 |prp17||splicing factor Prp17|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 558
Score = 26.6 bits (56), Expect = 2.4
Identities = 12/44 (27%), Positives = 24/44 (54%)
Frame = +3
Query: 162 PKYGNLLASCSYDRKVIIWKESGEWTKLYEYTGHESSVNSVAWA 293
P G+LL S S D ++ IW+ + + L + GH + ++++
Sbjct: 276 PISGHLLLSGSMDNQIKIWEVYHDRSLLRTFQGHARPIRDLSFS 319
>SPBC29A3.06 |||CGI-48 family|Schizosaccharomyces pombe|chr
2|||Manual
Length = 556
Score = 26.6 bits (56), Expect = 2.4
Identities = 20/77 (25%), Positives = 32/77 (41%), Gaps = 1/77 (1%)
Frame = +3
Query: 42 LATCSSDNSVKIYDIKNGTQTLAADLKGHFGPVWQVAWAHPKYGNLLASCSYDRKVIIWK 221
L TC D +++IY + L L + Q A HP G + + + + IW
Sbjct: 232 LLTCGFDRTLRIYQLDGKVNPLVTSLHLRSSAL-QTALFHPD-GKRVIAAGRRKYMYIWD 289
Query: 222 -ESGEWTKLYEYTGHES 269
ES + K+ G E+
Sbjct: 290 LESAQVQKVSRMYGQEN 306
>SPBC32H8.07 |git5|gpb1|heterotrimeric G protein beta subunit
Git5|Schizosaccharomyces pombe|chr 2|||Manual
Length = 305
Score = 26.6 bits (56), Expect = 2.4
Identities = 18/64 (28%), Positives = 33/64 (51%)
Frame = +3
Query: 39 KLATCSSDNSVKIYDIKNGTQTLAADLKGHFGPVWQVAWAHPKYGNLLASCSYDRKVIIW 218
KL + D + +++D ++T+ + L GH + +A G +LA+ S+D V +W
Sbjct: 246 KLLFIAKDKTCEVWD-SISSKTITS-LTGHENRISSLALTSD--GTMLATGSWDECVRLW 301
Query: 219 KESG 230
SG
Sbjct: 302 SSSG 305
Score = 26.2 bits (55), Expect = 3.1
Identities = 9/16 (56%), Positives = 10/16 (62%)
Frame = +3
Query: 489 PKRLVTGGCDNLIQXW 536
P VTGGCD L + W
Sbjct: 160 PNLFVTGGCDKLAKLW 175
>SPAC57A7.11 |mip1||WD repeat protein Mip1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1313
Score = 26.2 bits (55), Expect = 3.1
Identities = 15/43 (34%), Positives = 25/43 (58%), Gaps = 3/43 (6%)
Frame = +3
Query: 6 IHDAELDYXGLK-LATCSSDNSVKIYDIK--NGTQTLAADLKG 125
I + E+ G++ L + SSD VK++DI+ + QT + D G
Sbjct: 1181 IVNVEMQSSGMRELISASSDGEVKLWDIRMNHSLQTFSTDNSG 1223
>SPAC11E3.05 |||ubiquitin-protein ligase E3|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1323
Score = 26.2 bits (55), Expect = 3.1
Identities = 13/34 (38%), Positives = 18/34 (52%)
Frame = +3
Query: 117 LKGHFGPVWQVAWAHPKYGNLLASCSYDRKVIIW 218
L GH V + W H + ++LA+CS D V W
Sbjct: 318 LHGHTRAVTDMNW-HRQNPDVLATCSIDSSVHCW 350
>SPAC23H3.05c |swd1||COMPASS complex subunit
Swd1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 398
Score = 26.2 bits (55), Expect = 3.1
Identities = 16/50 (32%), Positives = 25/50 (50%)
Frame = +3
Query: 171 GNLLASCSYDRKVIIWKESGEWTKLYEYTGHESSVNSVAWAPAEYGLILA 320
G LAS + V+IW S ++ TGH ++ SV W+ + L+ A
Sbjct: 36 GYHLASGLVNGSVVIWDLS-TFSVSRVLTGHTRAIQSVCWSSCDRFLLTA 84
>SPAC23G3.01 |rpb2|SPAC521.06|DNA-directed RNA polymerase II complex
subunit Rpb2|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1210
Score = 25.8 bits (54), Expect = 4.1
Identities = 14/43 (32%), Positives = 25/43 (58%)
Frame = +3
Query: 300 EYGLILACCSSDGSISIIQYSQDTGNWDVKKITGAHAIGVNSI 428
E+ L LA S+ + ++YS TGNW +K + + +GV+ +
Sbjct: 427 EFNLTLAV-KSNIITNGLRYSLATGNWGDQKRSMVNRVGVSQV 468
>SPAC12B10.03 |||WD repeat protein, human WDR20
family|Schizosaccharomyces pombe|chr 1|||Manual
Length = 543
Score = 25.8 bits (54), Expect = 4.1
Identities = 20/65 (30%), Positives = 28/65 (43%), Gaps = 3/65 (4%)
Frame = +3
Query: 33 GLKLATCSSDNSVKIYDIKNGTQTLAADLKGHFGPVWQV---AWAHPKYGNLLASCSYDR 203
G +A D+ V IY + L A +GH V V AW +AS DR
Sbjct: 376 GKFIAIGGKDDLVSIYSFP--LRKLVARCQGHKSWVTDVIFDAWRCDDDNYRIASVGLDR 433
Query: 204 KVIIW 218
K+++W
Sbjct: 434 KLLLW 438
>SPCC553.04 |cyp9||WD repeat containing cyclophilin family
peptidyl-prolyl cis-trans isomerase
Cyp9|Schizosaccharomyces pombe|chr 3|||Manual
Length = 610
Score = 25.8 bits (54), Expect = 4.1
Identities = 25/98 (25%), Positives = 45/98 (45%), Gaps = 2/98 (2%)
Frame = +3
Query: 3 MIHDAELDYXGLKLATCSSDNSVKIYDIKNGTQTLAADLKGHFGPVWQVAWAHPKY-GNL 179
M+ AEL T + D S+K++D+++ DL+ F P + P +L
Sbjct: 92 MLLSAELSQDERLFITGADDKSLKVFDVESIDLVNIIDLE--FLPKAICCFNSPSLKTSL 149
Query: 180 LASCSYDRKVIIWKES-GEWTKLYEYTGHESSVNSVAW 290
+A S + +I + ES G+ LY H + V+ + +
Sbjct: 150 IAVSSAESPLIFFFESGGDGEVLYTVKKHTAPVHCLRY 187
>SPAC4D7.05 |sum1|tif34|translation initiation factor
eIF3i|Schizosaccharomyces pombe|chr 1|||Manual
Length = 328
Score = 25.4 bits (53), Expect = 5.5
Identities = 10/17 (58%), Positives = 13/17 (76%)
Frame = +3
Query: 117 LKGHFGPVWQVAWAHPK 167
+KGHFGP+ +A HPK
Sbjct: 284 VKGHFGPINTIA-VHPK 299
>SPBC15D4.03 |slm9||hira protein Slm9|Schizosaccharomyces pombe|chr
2|||Manual
Length = 807
Score = 25.4 bits (53), Expect = 5.5
Identities = 18/80 (22%), Positives = 34/80 (42%), Gaps = 5/80 (6%)
Frame = +3
Query: 171 GNLLASCSYDRKVIIWKES-----GEWTKLYEYTGHESSVNSVAWAPAEYGLILACCSSD 335
G LAS S+D + +WK S K +E + ++W+P + ++
Sbjct: 196 GQFLASQSFDHTLKVWKLSTFGVEKSIAKPFEQMPTGNRFLRLSWSPDGAHIASVNAVNE 255
Query: 336 GSISIIQYSQDTGNWDVKKI 395
G+ I +DT +D+ +
Sbjct: 256 GAYVIAIVQRDTWTYDINLV 275
>SPBC32H8.09 |||WD repeat protein, human WDR8
family|Schizosaccharomyces pombe|chr 2|||Manual
Length = 483
Score = 25.4 bits (53), Expect = 5.5
Identities = 26/104 (25%), Positives = 47/104 (45%), Gaps = 2/104 (1%)
Frame = +3
Query: 135 PVWQVAWAHPKYGNLLASCSYDRKVIIWKESGEWTKLYEYTGHESSVNSV-AWAPA-EYG 308
P+ ++W+ P G LL S+D K+ +W + + K Y +++V+ V A P+ ++
Sbjct: 102 PLSSISWS-PS-GELLLWSSFDSKITVWSLNTQ--KGYLLPHVKTNVSKVYALHPSMQFC 157
Query: 309 LILACCSSDGSISIIQYSQDTGNWDVKKITGAHAIGVNSISWCP 440
IL+ + + Q S+ W + K I I W P
Sbjct: 158 TILSRFNGSDCLQFYQISKKA--WILLKECKLPTIDSTGIHWSP 199
>SPAC13G7.08c |crb3||WD repeat protein Crb3|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 446
Score = 25.0 bits (52), Expect = 7.2
Identities = 8/19 (42%), Positives = 14/19 (73%)
Frame = +3
Query: 39 KLATCSSDNSVKIYDIKNG 95
+L T S DN+++I+D+ G
Sbjct: 191 RLYTASEDNTIRIWDVSTG 209
>SPBC106.11c |plg7||phospholipase A2 |Schizosaccharomyces pombe|chr
2|||Manual
Length = 438
Score = 25.0 bits (52), Expect = 7.2
Identities = 11/31 (35%), Positives = 17/31 (54%)
Frame = -3
Query: 292 AHATEFTELSCPVYSYSLVHSPDSFHMITFL 200
A A+ T L+ PVY L H P++ + F+
Sbjct: 90 AFASGLTNLALPVYKGELFHPPNNGKLPVFI 120
>SPBC16E9.11c |pub3||ubiquitin-protein ligase E3|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 786
Score = 25.0 bits (52), Expect = 7.2
Identities = 8/16 (50%), Positives = 12/16 (75%)
Frame = -1
Query: 168 TWDEPKLPATRGQNDP 121
TWD+P+LP+ Q+ P
Sbjct: 391 TWDDPRLPSALDQDVP 406
>SPBC15D4.14 |taf73||TATA-binding protein associated factor
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 642
Score = 24.6 bits (51), Expect = 9.5
Identities = 20/84 (23%), Positives = 38/84 (45%)
Frame = +3
Query: 42 LATCSSDNSVKIYDIKNGTQTLAADLKGHFGPVWQVAWAHPKYGNLLASCSYDRKVIIWK 221
LAT SSD++ +++D++ G H PV + + G LAS + +W
Sbjct: 502 LATGSSDHTTRMWDVRTGGTVRV--FNAHHSPVSALCMSAD--GLSLASADESGIIKVW- 556
Query: 222 ESGEWTKLYEYTGHESSVNSVAWA 293
+ + + H S V S++++
Sbjct: 557 DLRSSNQHVSFVKHSSIVYSLSFS 580
>SPBC4B4.08 |ght2||hexose transporter Ght2 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 531
Score = 24.6 bits (51), Expect = 9.5
Identities = 9/32 (28%), Positives = 20/32 (62%)
Frame = +3
Query: 300 EYGLILACCSSDGSISIIQYSQDTGNWDVKKI 395
+YG + A C+ G+I I ++++T +++I
Sbjct: 436 KYGYVFASCNLTGAIVIFLFAKETKGLTLEEI 467
>SPCC965.07c |gst2||glutathione S-transferase
Gst2|Schizosaccharomyces pombe|chr 3|||Manual
Length = 230
Score = 24.6 bits (51), Expect = 9.5
Identities = 11/34 (32%), Positives = 18/34 (52%)
Frame = +3
Query: 198 DRKVIIWKESGEWTKLYEYTGHESSVNSVAWAPA 299
DRK+ + + E+ KL +Y ++S V W A
Sbjct: 85 DRKISLSFDDPEYYKLIQYLFFQASGQGVIWGQA 118
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,282,312
Number of Sequences: 5004
Number of extensions: 47607
Number of successful extensions: 283
Number of sequences better than 10.0: 70
Number of HSP's better than 10.0 without gapping: 191
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 250
length of database: 2,362,478
effective HSP length: 69
effective length of database: 2,017,202
effective search space used: 223909422
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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