Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fe100P05_F_K20
(650 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC047932-1|AAH47932.1| 437|Homo sapiens vacuolar protein sortin... 169 7e-42
AF282903-1|AAG01470.1| 437|Homo sapiens vacuolar protein sortin... 169 7e-42
AF255952-1|AAK52408.1| 437|Homo sapiens vacuolar protein sortin... 169 7e-42
AF159063-1|AAD49227.1| 437|Homo sapiens SKD1-homolog protein. 169 7e-42
AF112215-1|AAF17203.1| 437|Homo sapiens SKD1 protein protein. 169 7e-42
AF155740-1|AAD42971.1| 432|Homo sapiens vacuolar sorting protei... 165 9e-41
BC039574-1|AAH39574.1| 444|Homo sapiens vacuolar protein sortin... 152 9e-37
AY232629-1|AAP59551.1| 444|Homo sapiens cell migration-inducing... 152 9e-37
AF282904-1|AAG01471.1| 444|Homo sapiens vacuolar protein sortin... 152 9e-37
AF195514-1|AAG33022.1| 444|Homo sapiens VPS4-2 ATPase protein. 152 9e-37
AF132747-1|AAL75948.1| 437|Homo sapiens SKD2 protein protein. 145 1e-34
BC009692-1|AAH09692.1| 81|Homo sapiens VPS4B protein protein. 105 1e-22
BC004540-1|AAH04540.1| 541|Homo sapiens RPS6KL1 protein protein. 42 0.002
AC006530-3|AAD30182.1| 549|Homo sapiens unknown protein. 42 0.002
BC056202-1|AAH56202.1| 813|Homo sapiens calpain 7 protein. 40 0.008
AB028639-1|BAA78730.1| 813|Homo sapiens PalBH protein. 40 0.008
BC034999-1|AAH34999.2| 466|Homo sapiens katanin p60 subunit A-l... 40 0.010
BC104769-1|AAI04770.1| 1066|Homo sapiens ribosomal protein S6 ki... 39 0.013
AL645860-2|CAH70704.1| 1054|Homo sapiens ribosomal protein S6 ki... 39 0.013
AL645860-1|CAH70703.1| 1066|Homo sapiens ribosomal protein S6 ki... 39 0.013
AL583826-2|CAH73805.1| 1054|Homo sapiens ribosomal protein S6 ki... 39 0.013
AL583826-1|CAH73804.1| 1066|Homo sapiens ribosomal protein S6 ki... 39 0.013
AL512449-2|CAH72000.1| 1054|Homo sapiens ribosomal protein S6 ki... 39 0.013
AL512449-1|CAH71999.1| 1066|Homo sapiens ribosomal protein S6 ki... 39 0.013
AK054800-1|BAB70808.1| 255|Homo sapiens protein ( Homo sapiens ... 39 0.013
AF477978-1|AAL84818.1| 1066|Homo sapiens RSK-like protein protein. 39 0.013
BC073998-1|AAH73998.1| 287|Homo sapiens ATAD1 protein protein. 38 0.031
BC063530-1|AAH63530.1| 330|Homo sapiens ATAD1 protein protein. 38 0.031
AL133327-1|CAI16701.1| 361|Homo sapiens ATPase family, AAA doma... 38 0.031
AK075223-1|BAC11482.1| 361|Homo sapiens protein ( Homo sapiens ... 38 0.031
AB070706-1|BAB63956.1| 1066|Homo sapiens RSK-like protein protein. 38 0.041
BX276089-3|CAI16433.1| 280|Homo sapiens katanin p60 (ATPase-con... 36 0.095
BX276089-2|CAI16431.1| 491|Homo sapiens katanin p60 (ATPase-con... 36 0.095
AL078581-3|CAI19506.1| 280|Homo sapiens katanin p60 (ATPase-con... 36 0.095
AL078581-2|CAI19505.1| 491|Homo sapiens katanin p60 (ATPase-con... 36 0.095
AF056022-1|AAC25114.1| 491|Homo sapiens p60 katanin protein. 36 0.095
BC000612-1|AAH00612.1| 490|Homo sapiens katanin p60 subunit A-l... 33 0.88
AL356750-1|CAI13718.1| 490|Homo sapiens katanin p60 subunit A-l... 33 0.88
BC051867-1|AAH51867.1| 674|Homo sapiens fidgetin-like 1 protein. 32 1.5
BC027856-1|AAH27856.1| 674|Homo sapiens FIGNL1 protein protein. 32 1.5
AK023142-1|BAB14426.1| 674|Homo sapiens protein ( Homo sapiens ... 32 1.5
AC018705-1|AAS01996.1| 674|Homo sapiens unknown protein. 32 1.5
BC150260-1|AAI50261.1| 584|Homo sapiens spastin protein. 32 2.0
AJ246003-1|CAB60208.1| 616|Homo sapiens spastin protein protein. 32 2.0
AJ246001-1|CAB60141.1| 616|Homo sapiens spastin protein protein. 32 2.0
AB029006-1|BAA83035.1| 584|Homo sapiens KIAA1083 protein protein. 32 2.0
>BC047932-1|AAH47932.1| 437|Homo sapiens vacuolar protein sorting 4
homolog A (S. cerevisiae) protein.
Length = 437
Score = 169 bits (411), Expect = 7e-42
Identities = 87/160 (54%), Positives = 100/160 (62%)
Frame = +2
Query: 170 MTSSNTLQKAIDLVTKATEEDKNKNYEEALRLYEHGVEYFLHAVKYEAQGERAKESIRAK 349
MT+S TLQKAIDLVTKATEEDK KNYEEALRLY+H VEYFLHA+KYEA ++AKESIRAK
Sbjct: 1 MTTS-TLQKAIDLVTKATEEDKAKNYEEALRLYQHAVEYFLHAIKYEAHSDKAKESIRAK 59
Query: 350 CLQYLDRAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLQGKLEGAIVV 529
C+QYLDRA LQ +L GA+V+
Sbjct: 60 CVQYLDRAEKLKDYLRSKEKHGKKPVKENQSEGKGSDSDSEGDNPEKKKLQEQLMGAVVM 119
Query: 530 EKPHVKWSDVAGXXXXXXXXXXXVILPIKFPHLFTGKRIP 649
EKP+++W+DVAG VILPIKFPHLFTGKR P
Sbjct: 120 EKPNIRWNDVAGLEGAKEALKEAVILPIKFPHLFTGKRTP 159
>AF282903-1|AAG01470.1| 437|Homo sapiens vacuolar protein sorting
factor 4A protein.
Length = 437
Score = 169 bits (411), Expect = 7e-42
Identities = 87/160 (54%), Positives = 100/160 (62%)
Frame = +2
Query: 170 MTSSNTLQKAIDLVTKATEEDKNKNYEEALRLYEHGVEYFLHAVKYEAQGERAKESIRAK 349
MT+S TLQKAIDLVTKATEEDK KNYEEALRLY+H VEYFLHA+KYEA ++AKESIRAK
Sbjct: 1 MTTS-TLQKAIDLVTKATEEDKAKNYEEALRLYQHAVEYFLHAIKYEAHSDKAKESIRAK 59
Query: 350 CLQYLDRAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLQGKLEGAIVV 529
C+QYLDRA LQ +L GA+V+
Sbjct: 60 CVQYLDRAEKLKDYLRSKEKHGKKPVKENQSEGKGSDSDSEGDNPEKKKLQEQLMGAVVM 119
Query: 530 EKPHVKWSDVAGXXXXXXXXXXXVILPIKFPHLFTGKRIP 649
EKP+++W+DVAG VILPIKFPHLFTGKR P
Sbjct: 120 EKPNIRWNDVAGLEGAKEALKEAVILPIKFPHLFTGKRTP 159
>AF255952-1|AAK52408.1| 437|Homo sapiens vacuolar protein sorting
VPS4-1 protein.
Length = 437
Score = 169 bits (411), Expect = 7e-42
Identities = 87/160 (54%), Positives = 100/160 (62%)
Frame = +2
Query: 170 MTSSNTLQKAIDLVTKATEEDKNKNYEEALRLYEHGVEYFLHAVKYEAQGERAKESIRAK 349
MT+S TLQKAIDLVTKATEEDK KNYEEALRLY+H VEYFLHA+KYEA ++AKESIRAK
Sbjct: 1 MTTS-TLQKAIDLVTKATEEDKAKNYEEALRLYQHAVEYFLHAIKYEAHSDKAKESIRAK 59
Query: 350 CLQYLDRAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLQGKLEGAIVV 529
C+QYLDRA LQ +L GA+V+
Sbjct: 60 CVQYLDRAEKLKDYLRSKEKHGKKPVKENQSEGKGSDSDSEGDNPEKKKLQEQLMGAVVM 119
Query: 530 EKPHVKWSDVAGXXXXXXXXXXXVILPIKFPHLFTGKRIP 649
EKP+++W+DVAG VILPIKFPHLFTGKR P
Sbjct: 120 EKPNIRWNDVAGLEGAKEALKEAVILPIKFPHLFTGKRTP 159
>AF159063-1|AAD49227.1| 437|Homo sapiens SKD1-homolog protein.
Length = 437
Score = 169 bits (411), Expect = 7e-42
Identities = 87/160 (54%), Positives = 100/160 (62%)
Frame = +2
Query: 170 MTSSNTLQKAIDLVTKATEEDKNKNYEEALRLYEHGVEYFLHAVKYEAQGERAKESIRAK 349
MT+S TLQKAIDLVTKATEEDK KNYEEALRLY+H VEYFLHA+KYEA ++AKESIRAK
Sbjct: 1 MTTS-TLQKAIDLVTKATEEDKAKNYEEALRLYQHAVEYFLHAIKYEAHSDKAKESIRAK 59
Query: 350 CLQYLDRAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLQGKLEGAIVV 529
C+QYLDRA LQ +L GA+V+
Sbjct: 60 CVQYLDRAEKLKDYLRSKEKHGKKPVKENQSEGKGSDSDSEGDNPEKKKLQEQLMGAVVM 119
Query: 530 EKPHVKWSDVAGXXXXXXXXXXXVILPIKFPHLFTGKRIP 649
EKP+++W+DVAG VILPIKFPHLFTGKR P
Sbjct: 120 EKPNIRWNDVAGLEGAKEALKEAVILPIKFPHLFTGKRTP 159
>AF112215-1|AAF17203.1| 437|Homo sapiens SKD1 protein protein.
Length = 437
Score = 169 bits (411), Expect = 7e-42
Identities = 87/160 (54%), Positives = 100/160 (62%)
Frame = +2
Query: 170 MTSSNTLQKAIDLVTKATEEDKNKNYEEALRLYEHGVEYFLHAVKYEAQGERAKESIRAK 349
MT+S TLQKAIDLVTKATEEDK KNYEEALRLY+H VEYFLHA+KYEA ++AKESIRAK
Sbjct: 1 MTTS-TLQKAIDLVTKATEEDKAKNYEEALRLYQHAVEYFLHAIKYEAHSDKAKESIRAK 59
Query: 350 CLQYLDRAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLQGKLEGAIVV 529
C+QYLDRA LQ +L GA+V+
Sbjct: 60 CVQYLDRAEKLKDYLRSKEEHGKKPVKENQSEGKGSDSDSEGDNPEKKKLQEQLMGAVVM 119
Query: 530 EKPHVKWSDVAGXXXXXXXXXXXVILPIKFPHLFTGKRIP 649
EKP+++W+DVAG VILPIKFPHLFTGKR P
Sbjct: 120 EKPNIRWNDVAGLEGAKEALKEAVILPIKFPHLFTGKRTP 159
>AF155740-1|AAD42971.1| 432|Homo sapiens vacuolar sorting protein 4
protein.
Length = 432
Score = 165 bits (402), Expect = 9e-41
Identities = 83/154 (53%), Positives = 95/154 (61%)
Frame = +2
Query: 188 LQKAIDLVTKATEEDKNKNYEEALRLYEHGVEYFLHAVKYEAQGERAKESIRAKCLQYLD 367
LQKAIDLVTKATEEDK KNYEEALRLY+H VEYFLHA+KYEA ++AKESIRAKC+QYLD
Sbjct: 1 LQKAIDLVTKATEEDKAKNYEEALRLYQHAVEYFLHAIKYEAHSDKAKESIRAKCVQYLD 60
Query: 368 RAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLQGKLEGAIVVEKPHVK 547
RA LQ +L GA+V+EKP+++
Sbjct: 61 RAEKLKDYLRSKEKHGKKPVKENQSEGKGSDSDSEGDNPEKKKLQEQLMGAVVMEKPNIR 120
Query: 548 WSDVAGXXXXXXXXXXXVILPIKFPHLFTGKRIP 649
W+DVAG VILPIKFPHLFTGKR P
Sbjct: 121 WNDVAGLEGAKEALKEAVILPIKFPHLFTGKRTP 154
>BC039574-1|AAH39574.1| 444|Homo sapiens vacuolar protein sorting 4
homolog B (S. cerevisiae) protein.
Length = 444
Score = 152 bits (369), Expect = 9e-37
Identities = 80/164 (48%), Positives = 96/164 (58%), Gaps = 5/164 (3%)
Frame = +2
Query: 173 TSSNTLQKAIDLVTKATEEDKNKNYEEALRLYEHGVEYFLHAVKYEAQGERAKESIRAKC 352
++S LQKAIDL +KA +EDK NYEEAL+LY+H V+YFLH VKYEAQG++AK+SIRAKC
Sbjct: 3 STSPNLQKAIDLASKAAQEDKAGNYEEALQLYQHAVQYFLHVVKYEAQGDKAKQSIRAKC 62
Query: 353 LQYLDRAXXXXXXXXXXXXXX-----XXXXXXXXXXXXXXXXXXXXXXXXXXXLQGKLEG 517
+YLDRA LQ +L+G
Sbjct: 63 TEYLDRAEKLKEYLKNKEKKAQKPVKEGQPSPADEKGNDSDGEGESDDPEKKKLQNQLQG 122
Query: 518 AIVVEKPHVKWSDVAGXXXXXXXXXXXVILPIKFPHLFTGKRIP 649
AIV+E+P+VKWSDVAG VILPIKFPHLFTGKR P
Sbjct: 123 AIVIERPNVKWSDVAGLEGAKEALKEAVILPIKFPHLFTGKRTP 166
>AY232629-1|AAP59551.1| 444|Homo sapiens cell migration-inducing 1
protein.
Length = 444
Score = 152 bits (369), Expect = 9e-37
Identities = 80/164 (48%), Positives = 96/164 (58%), Gaps = 5/164 (3%)
Frame = +2
Query: 173 TSSNTLQKAIDLVTKATEEDKNKNYEEALRLYEHGVEYFLHAVKYEAQGERAKESIRAKC 352
++S LQKAIDL +KA +EDK NYEEAL+LY+H V+YFLH VKYEAQG++AK+SIRAKC
Sbjct: 3 STSPNLQKAIDLASKAAQEDKAGNYEEALQLYQHAVQYFLHVVKYEAQGDKAKQSIRAKC 62
Query: 353 LQYLDRAXXXXXXXXXXXXXX-----XXXXXXXXXXXXXXXXXXXXXXXXXXXLQGKLEG 517
+YLDRA LQ +L+G
Sbjct: 63 TEYLDRAEKLKEYLKNKEKKAQKPVKEGQPSPADEKGNDSDGEGESDDPEKKKLQNQLQG 122
Query: 518 AIVVEKPHVKWSDVAGXXXXXXXXXXXVILPIKFPHLFTGKRIP 649
AIV+E+P+VKWSDVAG VILPIKFPHLFTGKR P
Sbjct: 123 AIVIERPNVKWSDVAGLEGAKEALKEAVILPIKFPHLFTGKRTP 166
>AF282904-1|AAG01471.1| 444|Homo sapiens vacuolar protein sorting
factor 4B protein.
Length = 444
Score = 152 bits (369), Expect = 9e-37
Identities = 80/164 (48%), Positives = 96/164 (58%), Gaps = 5/164 (3%)
Frame = +2
Query: 173 TSSNTLQKAIDLVTKATEEDKNKNYEEALRLYEHGVEYFLHAVKYEAQGERAKESIRAKC 352
++S LQKAIDL +KA +EDK NYEEAL+LY+H V+YFLH VKYEAQG++AK+SIRAKC
Sbjct: 3 STSPNLQKAIDLASKAAQEDKAGNYEEALQLYQHAVQYFLHVVKYEAQGDKAKQSIRAKC 62
Query: 353 LQYLDRAXXXXXXXXXXXXXX-----XXXXXXXXXXXXXXXXXXXXXXXXXXXLQGKLEG 517
+YLDRA LQ +L+G
Sbjct: 63 TEYLDRAEKLKEYLKNKEKKAQKPVKEGQPSPADEKGNDSDGEGESDDPEKKKLQNQLQG 122
Query: 518 AIVVEKPHVKWSDVAGXXXXXXXXXXXVILPIKFPHLFTGKRIP 649
AIV+E+P+VKWSDVAG VILPIKFPHLFTGKR P
Sbjct: 123 AIVIERPNVKWSDVAGLEGAKEALKEAVILPIKFPHLFTGKRTP 166
>AF195514-1|AAG33022.1| 444|Homo sapiens VPS4-2 ATPase protein.
Length = 444
Score = 152 bits (369), Expect = 9e-37
Identities = 80/164 (48%), Positives = 96/164 (58%), Gaps = 5/164 (3%)
Frame = +2
Query: 173 TSSNTLQKAIDLVTKATEEDKNKNYEEALRLYEHGVEYFLHAVKYEAQGERAKESIRAKC 352
++S LQKAIDL +KA +EDK NYEEAL+LY+H V+YFLH VKYEAQG++AK+SIRAKC
Sbjct: 3 STSPNLQKAIDLASKAAQEDKAGNYEEALQLYQHAVQYFLHVVKYEAQGDKAKQSIRAKC 62
Query: 353 LQYLDRAXXXXXXXXXXXXXX-----XXXXXXXXXXXXXXXXXXXXXXXXXXXLQGKLEG 517
+YLDRA LQ +L+G
Sbjct: 63 TEYLDRAEKLKEYLKNKEKKAQKPVKEGQPSPADEKGNDSDGEGESDDPEKKKLQNQLQG 122
Query: 518 AIVVEKPHVKWSDVAGXXXXXXXXXXXVILPIKFPHLFTGKRIP 649
AIV+E+P+VKWSDVAG VILPIKFPHLFTGKR P
Sbjct: 123 AIVIERPNVKWSDVAGLEGAKEALKEAVILPIKFPHLFTGKRTP 166
>AF132747-1|AAL75948.1| 437|Homo sapiens SKD2 protein protein.
Length = 437
Score = 145 bits (352), Expect = 1e-34
Identities = 81/160 (50%), Positives = 90/160 (56%)
Frame = +2
Query: 170 MTSSNTLQKAIDLVTKATEEDKNKNYEEALRLYEHGVEYFLHAVKYEAQGERAKESIRAK 349
MT+S TLQKAIDLVTKATEEDK KNYEEALRLY+H VEYFLHA+KYEA ++AKESIRAK
Sbjct: 1 MTTS-TLQKAIDLVTKATEEDKAKNYEEALRLYQHAVEYFLHAIKYEAHSDKAKESIRAK 59
Query: 350 CLQYLDRAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLQGKLEGAIVV 529
C+QYLDRA LQ +L GA+V+
Sbjct: 60 CVQYLDRAEKLKDYLRSKEEHGKKPVKENQSEGKGSDSDSEGDNPEKKKLQEQLMGAVVM 119
Query: 530 EKPHVKWSDVAGXXXXXXXXXXXVILPIKFPHLFTGKRIP 649
EKP VILPIKFPHLFTGK P
Sbjct: 120 EKPQHTVERRGRAGGAKEALKEAVILPIKFPHLFTGKTHP 159
>BC009692-1|AAH09692.1| 81|Homo sapiens VPS4B protein protein.
Length = 81
Score = 105 bits (253), Expect = 1e-22
Identities = 47/67 (70%), Positives = 58/67 (86%)
Frame = +2
Query: 173 TSSNTLQKAIDLVTKATEEDKNKNYEEALRLYEHGVEYFLHAVKYEAQGERAKESIRAKC 352
++S LQKAIDL +KA +EDK NYEEAL+LY+H V+YFLH VKYEAQG++AK+SIRAKC
Sbjct: 3 STSPNLQKAIDLASKAAQEDKAGNYEEALQLYQHAVQYFLHVVKYEAQGDKAKQSIRAKC 62
Query: 353 LQYLDRA 373
+YLDRA
Sbjct: 63 TEYLDRA 69
>BC004540-1|AAH04540.1| 541|Homo sapiens RPS6KL1 protein protein.
Length = 541
Score = 41.9 bits (94), Expect = 0.002
Identities = 22/68 (32%), Positives = 37/68 (54%)
Frame = +2
Query: 170 MTSSNTLQKAIDLVTKATEEDKNKNYEEALRLYEHGVEYFLHAVKYEAQGERAKESIRAK 349
MT + L A + A E D +++YE A Y++GV+ L + + ER +E+++ K
Sbjct: 44 MTKRDYLVDAATQIRLALERDVSEDYEAAFNHYQNGVDVLLRGIHVDPNKER-REAVKLK 102
Query: 350 CLQYLDRA 373
+YL RA
Sbjct: 103 ITKYLRRA 110
>AC006530-3|AAD30182.1| 549|Homo sapiens unknown protein.
Length = 549
Score = 41.9 bits (94), Expect = 0.002
Identities = 22/68 (32%), Positives = 37/68 (54%)
Frame = +2
Query: 170 MTSSNTLQKAIDLVTKATEEDKNKNYEEALRLYEHGVEYFLHAVKYEAQGERAKESIRAK 349
MT + L A + A E D +++YE A Y++GV+ L + + ER +E+++ K
Sbjct: 44 MTKRDYLVDAATQIRLALERDVSEDYEAAFNHYQNGVDVLLRGIHVDPNKER-REAVKLK 102
Query: 350 CLQYLDRA 373
+YL RA
Sbjct: 103 ITKYLRRA 110
>BC056202-1|AAH56202.1| 813|Homo sapiens calpain 7 protein.
Length = 813
Score = 39.9 bits (89), Expect = 0.008
Identities = 22/62 (35%), Positives = 35/62 (56%)
Frame = +2
Query: 188 LQKAIDLVTKATEEDKNKNYEEALRLYEHGVEYFLHAVKYEAQGERAKESIRAKCLQYLD 367
L++A LVT+A +ED+ +N E+A+ LY V+ L YE + + ++ Q LD
Sbjct: 87 LERAHFLVTQAFDEDEKENVEDAIELYTEAVDLCL-KTSYETADKVLQNKLKQLARQALD 145
Query: 368 RA 373
RA
Sbjct: 146 RA 147
>AB028639-1|BAA78730.1| 813|Homo sapiens PalBH protein.
Length = 813
Score = 39.9 bits (89), Expect = 0.008
Identities = 22/62 (35%), Positives = 35/62 (56%)
Frame = +2
Query: 188 LQKAIDLVTKATEEDKNKNYEEALRLYEHGVEYFLHAVKYEAQGERAKESIRAKCLQYLD 367
L++A LVT+A +ED+ +N E+A+ LY V+ L YE + + ++ Q LD
Sbjct: 87 LERAHFLVTQAFDEDEKENVEDAIELYTEAVDLCL-KTSYETADKVLQNKLKQLARQALD 145
Query: 368 RA 373
RA
Sbjct: 146 RA 147
>BC034999-1|AAH34999.2| 466|Homo sapiens katanin p60 subunit A-like
2 protein.
Length = 466
Score = 39.5 bits (88), Expect = 0.010
Identities = 14/39 (35%), Positives = 22/39 (56%)
Frame = +2
Query: 521 IVVEKPHVKWSDVAGXXXXXXXXXXXVILPIKFPHLFTG 637
I + P++KW+D+ G V+ PI++P LFTG
Sbjct: 172 IYLHNPNIKWNDIIGLDAAKQLVKEAVVYPIRYPQLFTG 210
>BC104769-1|AAI04770.1| 1066|Homo sapiens ribosomal protein S6
kinase, 52kDa, polypeptide 1 protein.
Length = 1066
Score = 39.1 bits (87), Expect = 0.013
Identities = 20/62 (32%), Positives = 37/62 (59%)
Frame = +2
Query: 188 LQKAIDLVTKATEEDKNKNYEEALRLYEHGVEYFLHAVKYEAQGERAKESIRAKCLQYLD 367
L+KA +L+ A ++++ +YE A Y GV+ L V+ E+ R +E+++ + +YL
Sbjct: 240 LEKAGELIKLALKKEEEDDYEAASDFYRKGVDLLLEGVQGESSPTR-REAVKRRTAEYLM 298
Query: 368 RA 373
RA
Sbjct: 299 RA 300
>AL645860-2|CAH70704.1| 1054|Homo sapiens ribosomal protein S6
kinase, 52kDa, polypeptide 1 protein.
Length = 1054
Score = 39.1 bits (87), Expect = 0.013
Identities = 20/62 (32%), Positives = 37/62 (59%)
Frame = +2
Query: 188 LQKAIDLVTKATEEDKNKNYEEALRLYEHGVEYFLHAVKYEAQGERAKESIRAKCLQYLD 367
L+KA +L+ A ++++ +YE A Y GV+ L V+ E+ R +E+++ + +YL
Sbjct: 228 LEKAGELIKLALKKEEEDDYEAASDFYRKGVDLLLEGVQGESSPTR-REAVKRRTAEYLM 286
Query: 368 RA 373
RA
Sbjct: 287 RA 288
>AL645860-1|CAH70703.1| 1066|Homo sapiens ribosomal protein S6
kinase, 52kDa, polypeptide 1 protein.
Length = 1066
Score = 39.1 bits (87), Expect = 0.013
Identities = 20/62 (32%), Positives = 37/62 (59%)
Frame = +2
Query: 188 LQKAIDLVTKATEEDKNKNYEEALRLYEHGVEYFLHAVKYEAQGERAKESIRAKCLQYLD 367
L+KA +L+ A ++++ +YE A Y GV+ L V+ E+ R +E+++ + +YL
Sbjct: 240 LEKAGELIKLALKKEEEDDYEAASDFYRKGVDLLLEGVQGESSPTR-REAVKRRTAEYLM 298
Query: 368 RA 373
RA
Sbjct: 299 RA 300
>AL583826-2|CAH73805.1| 1054|Homo sapiens ribosomal protein S6
kinase, 52kDa, polypeptide 1 protein.
Length = 1054
Score = 39.1 bits (87), Expect = 0.013
Identities = 20/62 (32%), Positives = 37/62 (59%)
Frame = +2
Query: 188 LQKAIDLVTKATEEDKNKNYEEALRLYEHGVEYFLHAVKYEAQGERAKESIRAKCLQYLD 367
L+KA +L+ A ++++ +YE A Y GV+ L V+ E+ R +E+++ + +YL
Sbjct: 228 LEKAGELIKLALKKEEEDDYEAASDFYRKGVDLLLEGVQGESSPTR-REAVKRRTAEYLM 286
Query: 368 RA 373
RA
Sbjct: 287 RA 288
>AL583826-1|CAH73804.1| 1066|Homo sapiens ribosomal protein S6
kinase, 52kDa, polypeptide 1 protein.
Length = 1066
Score = 39.1 bits (87), Expect = 0.013
Identities = 20/62 (32%), Positives = 37/62 (59%)
Frame = +2
Query: 188 LQKAIDLVTKATEEDKNKNYEEALRLYEHGVEYFLHAVKYEAQGERAKESIRAKCLQYLD 367
L+KA +L+ A ++++ +YE A Y GV+ L V+ E+ R +E+++ + +YL
Sbjct: 240 LEKAGELIKLALKKEEEDDYEAASDFYRKGVDLLLEGVQGESSPTR-REAVKRRTAEYLM 298
Query: 368 RA 373
RA
Sbjct: 299 RA 300
>AL512449-2|CAH72000.1| 1054|Homo sapiens ribosomal protein S6
kinase, 52kDa, polypeptide 1 protein.
Length = 1054
Score = 39.1 bits (87), Expect = 0.013
Identities = 20/62 (32%), Positives = 37/62 (59%)
Frame = +2
Query: 188 LQKAIDLVTKATEEDKNKNYEEALRLYEHGVEYFLHAVKYEAQGERAKESIRAKCLQYLD 367
L+KA +L+ A ++++ +YE A Y GV+ L V+ E+ R +E+++ + +YL
Sbjct: 228 LEKAGELIKLALKKEEEDDYEAASDFYRKGVDLLLEGVQGESSPTR-REAVKRRTAEYLM 286
Query: 368 RA 373
RA
Sbjct: 287 RA 288
>AL512449-1|CAH71999.1| 1066|Homo sapiens ribosomal protein S6
kinase, 52kDa, polypeptide 1 protein.
Length = 1066
Score = 39.1 bits (87), Expect = 0.013
Identities = 20/62 (32%), Positives = 37/62 (59%)
Frame = +2
Query: 188 LQKAIDLVTKATEEDKNKNYEEALRLYEHGVEYFLHAVKYEAQGERAKESIRAKCLQYLD 367
L+KA +L+ A ++++ +YE A Y GV+ L V+ E+ R +E+++ + +YL
Sbjct: 240 LEKAGELIKLALKKEEEDDYEAASDFYRKGVDLLLEGVQGESSPTR-REAVKRRTAEYLM 298
Query: 368 RA 373
RA
Sbjct: 299 RA 300
>AK054800-1|BAB70808.1| 255|Homo sapiens protein ( Homo sapiens
cDNA FLJ30238 fis, clone BRACE2002050. ).
Length = 255
Score = 39.1 bits (87), Expect = 0.013
Identities = 21/68 (30%), Positives = 36/68 (52%)
Frame = +2
Query: 170 MTSSNTLQKAIDLVTKATEEDKNKNYEEALRLYEHGVEYFLHAVKYEAQGERAKESIRAK 349
MT + L A + A E +++YE A Y++GV+ L + + ER +E+++ K
Sbjct: 44 MTKRDYLVDAATQIRLALERGVSEDYEAAFNHYQNGVDVLLRGIHVDPNKER-REAVKLK 102
Query: 350 CLQYLDRA 373
+YL RA
Sbjct: 103 ITKYLRRA 110
>AF477978-1|AAL84818.1| 1066|Homo sapiens RSK-like protein protein.
Length = 1066
Score = 39.1 bits (87), Expect = 0.013
Identities = 20/62 (32%), Positives = 37/62 (59%)
Frame = +2
Query: 188 LQKAIDLVTKATEEDKNKNYEEALRLYEHGVEYFLHAVKYEAQGERAKESIRAKCLQYLD 367
L+KA +L+ A ++++ +YE A Y GV+ L V+ E+ R +E+++ + +YL
Sbjct: 240 LEKAGELIKLALKKEEEDDYEAASDFYRKGVDLLLEGVQGESSPTR-REAVKRRTAEYLM 298
Query: 368 RA 373
RA
Sbjct: 299 RA 300
>BC073998-1|AAH73998.1| 287|Homo sapiens ATAD1 protein protein.
Length = 287
Score = 37.9 bits (84), Expect = 0.031
Identities = 17/36 (47%), Positives = 19/36 (52%)
Frame = +2
Query: 539 HVKWSDVAGXXXXXXXXXXXVILPIKFPHLFTGKRI 646
HV WSD+AG VILPIK HLF R+
Sbjct: 87 HVTWSDIAGLDDVITDLKDTVILPIKKKHLFENSRL 122
>BC063530-1|AAH63530.1| 330|Homo sapiens ATAD1 protein protein.
Length = 330
Score = 37.9 bits (84), Expect = 0.031
Identities = 17/36 (47%), Positives = 19/36 (52%)
Frame = +2
Query: 539 HVKWSDVAGXXXXXXXXXXXVILPIKFPHLFTGKRI 646
HV WSD+AG VILPIK HLF R+
Sbjct: 56 HVTWSDIAGLDDVITDLKDTVILPIKKKHLFENSRL 91
>AL133327-1|CAI16701.1| 361|Homo sapiens ATPase family, AAA domain
containing 1 protein.
Length = 361
Score = 37.9 bits (84), Expect = 0.031
Identities = 17/36 (47%), Positives = 19/36 (52%)
Frame = +2
Query: 539 HVKWSDVAGXXXXXXXXXXXVILPIKFPHLFTGKRI 646
HV WSD+AG VILPIK HLF R+
Sbjct: 87 HVTWSDIAGLDDVITDLKDTVILPIKKKHLFENSRL 122
>AK075223-1|BAC11482.1| 361|Homo sapiens protein ( Homo sapiens
cDNA FLJ90742 fis, clone PLACE1011181, weakly similar to
MSP1 PROTEIN HOMOLOG. ).
Length = 361
Score = 37.9 bits (84), Expect = 0.031
Identities = 17/36 (47%), Positives = 19/36 (52%)
Frame = +2
Query: 539 HVKWSDVAGXXXXXXXXXXXVILPIKFPHLFTGKRI 646
HV WSD+AG VILPIK HLF R+
Sbjct: 87 HVTWSDIAGLDDVITDLKDTVILPIKKKHLFENSRL 122
>AB070706-1|BAB63956.1| 1066|Homo sapiens RSK-like protein protein.
Length = 1066
Score = 37.5 bits (83), Expect = 0.041
Identities = 19/62 (30%), Positives = 36/62 (58%)
Frame = +2
Query: 188 LQKAIDLVTKATEEDKNKNYEEALRLYEHGVEYFLHAVKYEAQGERAKESIRAKCLQYLD 367
L+KA +L+ ++++ +YE A Y GV+ L V+ E+ R +E+++ + +YL
Sbjct: 240 LEKAGELIKLVLKKEEEDDYEAASDFYRKGVDLLLEGVQGESSPTR-REAVKRRTAEYLM 298
Query: 368 RA 373
RA
Sbjct: 299 RA 300
>BX276089-3|CAI16433.1| 280|Homo sapiens katanin p60
(ATPase-containing) subunit A 1 protein.
Length = 280
Score = 36.3 bits (80), Expect = 0.095
Identities = 16/47 (34%), Positives = 23/47 (48%)
Frame = +2
Query: 509 LEGAIVVEKPHVKWSDVAGXXXXXXXXXXXVILPIKFPHLFTGKRIP 649
LE I+ + P+V+W D+A V+LP+ P F G R P
Sbjct: 195 LERDIISQNPNVRWDDIADLVEAKKLLKEAVVLPMWMPEFFKGIRRP 241
>BX276089-2|CAI16431.1| 491|Homo sapiens katanin p60
(ATPase-containing) subunit A 1 protein.
Length = 491
Score = 36.3 bits (80), Expect = 0.095
Identities = 16/47 (34%), Positives = 23/47 (48%)
Frame = +2
Query: 509 LEGAIVVEKPHVKWSDVAGXXXXXXXXXXXVILPIKFPHLFTGKRIP 649
LE I+ + P+V+W D+A V+LP+ P F G R P
Sbjct: 195 LERDIISQNPNVRWDDIADLVEAKKLLKEAVVLPMWMPEFFKGIRRP 241
>AL078581-3|CAI19506.1| 280|Homo sapiens katanin p60
(ATPase-containing) subunit A 1 protein.
Length = 280
Score = 36.3 bits (80), Expect = 0.095
Identities = 16/47 (34%), Positives = 23/47 (48%)
Frame = +2
Query: 509 LEGAIVVEKPHVKWSDVAGXXXXXXXXXXXVILPIKFPHLFTGKRIP 649
LE I+ + P+V+W D+A V+LP+ P F G R P
Sbjct: 195 LERDIISQNPNVRWDDIADLVEAKKLLKEAVVLPMWMPEFFKGIRRP 241
>AL078581-2|CAI19505.1| 491|Homo sapiens katanin p60
(ATPase-containing) subunit A 1 protein.
Length = 491
Score = 36.3 bits (80), Expect = 0.095
Identities = 16/47 (34%), Positives = 23/47 (48%)
Frame = +2
Query: 509 LEGAIVVEKPHVKWSDVAGXXXXXXXXXXXVILPIKFPHLFTGKRIP 649
LE I+ + P+V+W D+A V+LP+ P F G R P
Sbjct: 195 LERDIISQNPNVRWDDIADLVEAKKLLKEAVVLPMWMPEFFKGIRRP 241
>AF056022-1|AAC25114.1| 491|Homo sapiens p60 katanin protein.
Length = 491
Score = 36.3 bits (80), Expect = 0.095
Identities = 16/47 (34%), Positives = 23/47 (48%)
Frame = +2
Query: 509 LEGAIVVEKPHVKWSDVAGXXXXXXXXXXXVILPIKFPHLFTGKRIP 649
LE I+ + P+V+W D+A V+LP+ P F G R P
Sbjct: 195 LERDIISQNPNVRWDDIADLVEAKKLLKEAVVLPMWMPEFFKGIRRP 241
>BC000612-1|AAH00612.1| 490|Homo sapiens katanin p60 subunit A-like
1 protein.
Length = 490
Score = 33.1 bits (72), Expect = 0.88
Identities = 16/47 (34%), Positives = 20/47 (42%)
Frame = +2
Query: 509 LEGAIVVEKPHVKWSDVAGXXXXXXXXXXXVILPIKFPHLFTGKRIP 649
LE IV P + W D+A V+LP+ P F G R P
Sbjct: 194 LERDIVSRNPSIHWDDIADLEEAKKLLREAVVLPMWMPDFFKGIRRP 240
>AL356750-1|CAI13718.1| 490|Homo sapiens katanin p60 subunit A-like
1 protein.
Length = 490
Score = 33.1 bits (72), Expect = 0.88
Identities = 16/47 (34%), Positives = 20/47 (42%)
Frame = +2
Query: 509 LEGAIVVEKPHVKWSDVAGXXXXXXXXXXXVILPIKFPHLFTGKRIP 649
LE IV P + W D+A V+LP+ P F G R P
Sbjct: 194 LERDIVSRNPSIHWDDIADLEEAKKLLREAVVLPMWMPDFFKGIRRP 240
>BC051867-1|AAH51867.1| 674|Homo sapiens fidgetin-like 1 protein.
Length = 674
Score = 32.3 bits (70), Expect = 1.5
Identities = 14/38 (36%), Positives = 18/38 (47%)
Frame = +2
Query: 536 PHVKWSDVAGXXXXXXXXXXXVILPIKFPHLFTGKRIP 649
P V W D+AG V+ P+ P +FTG R P
Sbjct: 396 PPVNWEDIAGVEFAKATIKEIVVWPMLRPDIFTGLRGP 433
>BC027856-1|AAH27856.1| 674|Homo sapiens FIGNL1 protein protein.
Length = 674
Score = 32.3 bits (70), Expect = 1.5
Identities = 14/38 (36%), Positives = 18/38 (47%)
Frame = +2
Query: 536 PHVKWSDVAGXXXXXXXXXXXVILPIKFPHLFTGKRIP 649
P V W D+AG V+ P+ P +FTG R P
Sbjct: 396 PPVNWEDIAGVEFAKATIKEIVVWPMLRPDIFTGLRGP 433
>AK023142-1|BAB14426.1| 674|Homo sapiens protein ( Homo sapiens
cDNA FLJ13080 fis, clone NT2RP3002007, weakly similar to
SAP1 PROTEIN. ).
Length = 674
Score = 32.3 bits (70), Expect = 1.5
Identities = 14/38 (36%), Positives = 18/38 (47%)
Frame = +2
Query: 536 PHVKWSDVAGXXXXXXXXXXXVILPIKFPHLFTGKRIP 649
P V W D+AG V+ P+ P +FTG R P
Sbjct: 396 PPVNWEDIAGVEFAKATIKEIVVWPMLRPDIFTGLRGP 433
>AC018705-1|AAS01996.1| 674|Homo sapiens unknown protein.
Length = 674
Score = 32.3 bits (70), Expect = 1.5
Identities = 14/38 (36%), Positives = 18/38 (47%)
Frame = +2
Query: 536 PHVKWSDVAGXXXXXXXXXXXVILPIKFPHLFTGKRIP 649
P V W D+AG V+ P+ P +FTG R P
Sbjct: 396 PPVNWEDIAGVEFAKATIKEIVVWPMLRPDIFTGLRGP 433
>BC150260-1|AAI50261.1| 584|Homo sapiens spastin protein.
Length = 584
Score = 31.9 bits (69), Expect = 2.0
Identities = 16/36 (44%), Positives = 18/36 (50%)
Frame = +2
Query: 542 VKWSDVAGXXXXXXXXXXXVILPIKFPHLFTGKRIP 649
VK+ D+AG VILP P LFTG R P
Sbjct: 307 VKFDDIAGQDLAKQALQEIVILPSLRPELFTGLRAP 342
>AJ246003-1|CAB60208.1| 616|Homo sapiens spastin protein protein.
Length = 616
Score = 31.9 bits (69), Expect = 2.0
Identities = 16/36 (44%), Positives = 18/36 (50%)
Frame = +2
Query: 542 VKWSDVAGXXXXXXXXXXXVILPIKFPHLFTGKRIP 649
VK+ D+AG VILP P LFTG R P
Sbjct: 339 VKFDDIAGQDLAKQALQEIVILPSLRPELFTGLRAP 374
>AJ246001-1|CAB60141.1| 616|Homo sapiens spastin protein protein.
Length = 616
Score = 31.9 bits (69), Expect = 2.0
Identities = 16/36 (44%), Positives = 18/36 (50%)
Frame = +2
Query: 542 VKWSDVAGXXXXXXXXXXXVILPIKFPHLFTGKRIP 649
VK+ D+AG VILP P LFTG R P
Sbjct: 339 VKFDDIAGQDLAKQALQEIVILPSLRPELFTGLRAP 374
>AB029006-1|BAA83035.1| 584|Homo sapiens KIAA1083 protein protein.
Length = 584
Score = 31.9 bits (69), Expect = 2.0
Identities = 16/36 (44%), Positives = 18/36 (50%)
Frame = +2
Query: 542 VKWSDVAGXXXXXXXXXXXVILPIKFPHLFTGKRIP 649
VK+ D+AG VILP P LFTG R P
Sbjct: 307 VKFDDIAGQDLAKQALQEIVILPSLRPELFTGLRAP 342
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 70,177,008
Number of Sequences: 237096
Number of extensions: 1161051
Number of successful extensions: 2575
Number of sequences better than 10.0: 46
Number of HSP's better than 10.0 without gapping: 2357
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2518
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 7253890590
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -