Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fe100P05_F_K20
         (650 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AC024756-9|AAK29883.4|  430|Caenorhabditis elegans Related to ye...   124   7e-29
AF016427-1|AAB65351.1|  594|Caenorhabditis elegans Hypothetical ...    36   0.025
Z75712-1|CAB00040.1|  724|Caenorhabditis elegans Hypothetical pr...    29   3.8  
U53149-2|AAM29664.1|  451|Caenorhabditis elegans Hypothetical pr...    29   3.8  
Z82077-5|CAB63333.1|  783|Caenorhabditis elegans Hypothetical pr...    28   6.6  
AF039053-2|AAC25877.3|  294|Caenorhabditis elegans Serpentine re...    28   6.6  
Z79601-6|CAB01887.1|  872|Caenorhabditis elegans Hypothetical pr...    27   8.7  
Z79596-9|CAB01859.1|  872|Caenorhabditis elegans Hypothetical pr...    27   8.7  
Z77670-1|CAB01247.1|  484|Caenorhabditis elegans Hypothetical pr...    27   8.7  
Z35663-14|CAA84733.1|  805|Caenorhabditis elegans Hypothetical p...    27   8.7  

>AC024756-9|AAK29883.4|  430|Caenorhabditis elegans Related to yeast
           vacuolar proteinsorting factor protein 4 protein.
          Length = 430

 Score =  124 bits (298), Expect = 7e-29
 Identities = 69/154 (44%), Positives = 85/154 (55%)
 Frame = +2

Query: 188 LQKAIDLVTKATEEDKNKNYEEALRLYEHGVEYFLHAVKYEAQGERAKESIRAKCLQYLD 367
           LQKAI+LVTKATEED    Y++ALRLY+  +EYFLHA+KYE+QG++ + +IR K  QYL+
Sbjct: 6   LQKAIELVTKATEEDTAGRYDQALRLYDQAIEYFLHAIKYESQGDKQRNAIRDKVGQYLN 65

Query: 368 RAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLQGKLEGAIVVEKPHVK 547
           RA                                          Q KL GAIV+EKP+VK
Sbjct: 66  RA---------EQIKTHLKDGKTQKKPVKDGKDDSDEDEDKKKFQDKLSGAIVMEKPNVK 116

Query: 548 WSDVAGXXXXXXXXXXXVILPIKFPHLFTGKRIP 649
           W+D+AG           VILPIKFP LFTG R P
Sbjct: 117 WTDIAGLEGAKEALKEAVILPIKFPQLFTGNRKP 150


>AF016427-1|AAB65351.1|  594|Caenorhabditis elegans Hypothetical
           protein F32D1.1 protein.
          Length = 594

 Score = 35.9 bits (79), Expect = 0.025
 Identities = 17/47 (36%), Positives = 23/47 (48%)
 Frame = +2

Query: 509 LEGAIVVEKPHVKWSDVAGXXXXXXXXXXXVILPIKFPHLFTGKRIP 649
           +E  I+     + W+DVAG           V+LP K P +FTG R P
Sbjct: 302 IESEIMSVNNEIGWADVAGLEGAKKALREIVVLPFKRPDVFTGIRAP 348


>Z75712-1|CAB00040.1|  724|Caenorhabditis elegans Hypothetical
           protein K04G2.3 protein.
          Length = 724

 Score = 28.7 bits (61), Expect = 3.8
 Identities = 12/36 (33%), Positives = 17/36 (47%)
 Frame = +2

Query: 524 VVEKPHVKWSDVAGXXXXXXXXXXXVILPIKFPHLF 631
           ++E P+V W+D+ G           VI P K P  F
Sbjct: 450 ILEVPNVSWNDIGGNEELKLEIQQAVIWPQKHPEAF 485


>U53149-2|AAM29664.1|  451|Caenorhabditis elegans Hypothetical
           protein C24B5.2a protein.
          Length = 451

 Score = 28.7 bits (61), Expect = 3.8
 Identities = 16/42 (38%), Positives = 20/42 (47%)
 Frame = +2

Query: 524 VVEKPHVKWSDVAGXXXXXXXXXXXVILPIKFPHLFTGKRIP 649
           V++   V+  DVAG           VILP   P+LF G R P
Sbjct: 169 VLDNTGVRMDDVAGCHSAKAALEEAVILPALNPNLFKGLRQP 210


>Z82077-5|CAB63333.1|  783|Caenorhabditis elegans Hypothetical
           protein W09C5.7 protein.
          Length = 783

 Score = 27.9 bits (59), Expect = 6.6
 Identities = 14/29 (48%), Positives = 17/29 (58%)
 Frame = +2

Query: 167 TMTSSNTLQKAIDLVTKATEEDKNKNYEE 253
           T T     QKAI++VT  TE D+N   EE
Sbjct: 503 THTKDAQRQKAINIVTGQTEADENAEEEE 531


>AF039053-2|AAC25877.3|  294|Caenorhabditis elegans Serpentine
           receptor, class bc (class b-like) protein 20 protein.
          Length = 294

 Score = 27.9 bits (59), Expect = 6.6
 Identities = 11/34 (32%), Positives = 18/34 (52%)
 Frame = -1

Query: 467 CHYHSSYHHFWIPHPLLVFSFDLF*DIPLIFQLY 366
           C  ++ YH +WI H + VF+      I L  +L+
Sbjct: 160 CTINACYHQYWITHRMTVFALMFLFSIFLASKLF 193


>Z79601-6|CAB01887.1|  872|Caenorhabditis elegans Hypothetical
           protein K09A9.6 protein.
          Length = 872

 Score = 27.5 bits (58), Expect = 8.7
 Identities = 18/65 (27%), Positives = 33/65 (50%), Gaps = 9/65 (13%)
 Frame = +2

Query: 203 DLVTKATEEDKNKNYEEALRLYEHGV--------EYFLHAVKYEAQGE-RAKESIRAKCL 355
           D++ +A    +   YEEA+ L++H +         YF  A  Y+ +GE  A E+ R K +
Sbjct: 453 DILDRADNLVEKHQYEEAMELFDHVIAVYPASTRAYFGKARAYDIRGEIEADETDRDKAI 512

Query: 356 QYLDR 370
           +  ++
Sbjct: 513 EIYEK 517


>Z79596-9|CAB01859.1|  872|Caenorhabditis elegans Hypothetical
           protein K09A9.6 protein.
          Length = 872

 Score = 27.5 bits (58), Expect = 8.7
 Identities = 18/65 (27%), Positives = 33/65 (50%), Gaps = 9/65 (13%)
 Frame = +2

Query: 203 DLVTKATEEDKNKNYEEALRLYEHGV--------EYFLHAVKYEAQGE-RAKESIRAKCL 355
           D++ +A    +   YEEA+ L++H +         YF  A  Y+ +GE  A E+ R K +
Sbjct: 453 DILDRADNLVEKHQYEEAMELFDHVIAVYPASTRAYFGKARAYDIRGEIEADETDRDKAI 512

Query: 356 QYLDR 370
           +  ++
Sbjct: 513 EIYEK 517


>Z77670-1|CAB01247.1|  484|Caenorhabditis elegans Hypothetical
           protein W05E10.1 protein.
          Length = 484

 Score = 27.5 bits (58), Expect = 8.7
 Identities = 11/25 (44%), Positives = 15/25 (60%)
 Frame = -2

Query: 343 TNAFFCPFTLGLIFYCMKKILYTVL 269
           T +F  P   GL+F C+  ILY +L
Sbjct: 96  TESFKVPVATGLVFCCVGNILYGIL 120


>Z35663-14|CAA84733.1|  805|Caenorhabditis elegans Hypothetical
           protein T04A8.16 protein.
          Length = 805

 Score = 27.5 bits (58), Expect = 8.7
 Identities = 14/38 (36%), Positives = 18/38 (47%)
 Frame = +2

Query: 191 QKAIDLVTKATEEDKNKNYEEALRLYEHGVEYFLHAVK 304
           Q A +L  KA   D+ K YEEA+  Y       L  V+
Sbjct: 7   QSAFELSQKAVYYDQGKKYEEAIFCYTEAGNQLLRLVQ 44


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,513,156
Number of Sequences: 27780
Number of extensions: 189269
Number of successful extensions: 554
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 525
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 554
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1444744186
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)