Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fe100P05_F_K17
         (553 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF990671-1|ABS30732.1| 1256|Anopheles gambiae voltage-gated calc...    28   0.23 
L76433-1|AAC27659.1|  392|Anopheles gambiae tryptophan oxygenase...    26   0.72 
L76432-1|AAC27663.1|  392|Anopheles gambiae tryptophan oxygenase...    26   0.72 
CR954256-7|CAJ14148.1| 1087|Anopheles gambiae predicted protein ...    25   1.3  
AB090816-2|BAC57908.1| 1201|Anopheles gambiae reverse transcript...    23   5.0  
AJ439398-8|CAD28131.1| 1283|Anopheles gambiae putative different...    23   6.7  
AY578811-1|AAT07316.1|  565|Anopheles gambiae thickveins protein.      23   8.8  

>EF990671-1|ABS30732.1| 1256|Anopheles gambiae voltage-gated calcium
           channel alpha2-delta subunit 1 protein.
          Length = 1256

 Score = 27.9 bits (59), Expect = 0.23
 Identities = 10/11 (90%), Positives = 10/11 (90%)
 Frame = +1

Query: 244 HHG*GGIPVGH 276
           HHG GGIPVGH
Sbjct: 752 HHGHGGIPVGH 762


>L76433-1|AAC27659.1|  392|Anopheles gambiae tryptophan oxygenase
           protein.
          Length = 392

 Score = 26.2 bits (55), Expect = 0.72
 Identities = 12/44 (27%), Positives = 23/44 (52%)
 Frame = -1

Query: 328 VPSNMKMINIDSSKPPHHVQLVFLLIHGVVMLWKWEAVGNLQTV 197
           V S  +M++++  KP H   L F++ H    LW  + +  L ++
Sbjct: 36  VLSAQRMLSVEGKKPVHDEHL-FIVTHQAYELWFKQIIFELDSI 78



 Score = 22.6 bits (46), Expect = 8.8
 Identities = 8/36 (22%), Positives = 19/36 (52%)
 Frame = -1

Query: 283 PHHVQLVFLLIHGVVMLWKWEAVGNLQTVLNDQXQG 176
           PH + ++ + I  ++  W++  V  +Q ++  Q  G
Sbjct: 292 PHQLLMLLMDIDSLITKWRYNHVIMVQRMIGSQQLG 327


>L76432-1|AAC27663.1|  392|Anopheles gambiae tryptophan oxygenase
           protein.
          Length = 392

 Score = 26.2 bits (55), Expect = 0.72
 Identities = 12/44 (27%), Positives = 23/44 (52%)
 Frame = -1

Query: 328 VPSNMKMINIDSSKPPHHVQLVFLLIHGVVMLWKWEAVGNLQTV 197
           V S  +M++++  KP H   L F++ H    LW  + +  L ++
Sbjct: 36  VLSAQRMLSVEGKKPVHDEHL-FIVTHQAYELWFKQIIFELDSI 78



 Score = 22.6 bits (46), Expect = 8.8
 Identities = 8/36 (22%), Positives = 19/36 (52%)
 Frame = -1

Query: 283 PHHVQLVFLLIHGVVMLWKWEAVGNLQTVLNDQXQG 176
           PH + ++ + I  ++  W++  V  +Q ++  Q  G
Sbjct: 292 PHQLLMLLMDIDSLITKWRYNHVIMVQRMIGSQQLG 327


>CR954256-7|CAJ14148.1| 1087|Anopheles gambiae predicted protein
           protein.
          Length = 1087

 Score = 25.4 bits (53), Expect = 1.3
 Identities = 12/36 (33%), Positives = 22/36 (61%)
 Frame = -1

Query: 304 NIDSSKPPHHVQLVFLLIHGVVMLWKWEAVGNLQTV 197
           NI++  PP  ++ + LLI+  + L   E++ NLQ +
Sbjct: 761 NIEAEDPPIFLRFINLLINDAIFLLD-ESLSNLQQI 795


>AB090816-2|BAC57908.1| 1201|Anopheles gambiae reverse transcriptase
           protein.
          Length = 1201

 Score = 23.4 bits (48), Expect = 5.0
 Identities = 11/44 (25%), Positives = 19/44 (43%)
 Frame = +3

Query: 141 SCSNMEVAQGSSPWXWSLRTVWRLPTASHFQSMTTPWMRRNTSW 272
           S + + +++GS    +S+R  W L    HF+       R    W
Sbjct: 10  SGARLSISRGSPTGVYSVRRRWSLCQKLHFRDQVCCVQRSPPHW 53


>AJ439398-8|CAD28131.1| 1283|Anopheles gambiae putative
           differentiation regulator protein.
          Length = 1283

 Score = 23.0 bits (47), Expect = 6.7
 Identities = 16/50 (32%), Positives = 19/50 (38%)
 Frame = -3

Query: 257 PHPWCRHALEMGSSW*SPDGSQRPXPRRAXLSHLHVAA*FFMTVFHYFHH 108
           PHP+   A    +S  S      P P  A  SH  V A       H+ HH
Sbjct: 777 PHPYYTAAAMAAASPLSLSSKAPPHPHSALSSHSPVGA--GSHHLHHLHH 824


>AY578811-1|AAT07316.1|  565|Anopheles gambiae thickveins protein.
          Length = 565

 Score = 22.6 bits (46), Expect = 8.8
 Identities = 8/22 (36%), Positives = 14/22 (63%)
 Frame = -3

Query: 404 PQ*RSDSDIVTLITKGLENCLH 339
           PQ   D DI+ +++K ++ C H
Sbjct: 516 PQRWQDEDILVVLSKIMQECWH 537


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 558,652
Number of Sequences: 2352
Number of extensions: 11324
Number of successful extensions: 42
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 40
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 42
length of database: 563,979
effective HSP length: 61
effective length of database: 420,507
effective search space used: 51301854
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)