Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fe100P05_F_K16
(651 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AL032631-3|CAE54916.1| 583|Caenorhabditis elegans Hypothetical ... 259 1e-69
AL032631-2|CAA21572.1| 646|Caenorhabditis elegans Hypothetical ... 259 1e-69
U24123-1|AAA65224.1| 646|Caenorhabditis elegans polyadenylate-b... 259 1e-69
Z50110-2|CAA90446.1| 566|Caenorhabditis elegans Hypothetical pr... 253 7e-68
Z50110-1|CAA90444.1| 692|Caenorhabditis elegans Hypothetical pr... 253 7e-68
AL032631-4|CAE54917.1| 586|Caenorhabditis elegans Hypothetical ... 233 8e-62
Z78536-3|CAB01717.2| 360|Caenorhabditis elegans Hypothetical pr... 86 2e-17
U28944-5|AAK68191.1| 408|Caenorhabditis elegans Hypothetical pr... 84 7e-17
U28944-7|AAN63457.1| 295|Caenorhabditis elegans Hypothetical pr... 77 8e-15
U28944-6|AAN63456.1| 305|Caenorhabditis elegans Hypothetical pr... 77 8e-15
U28944-4|AAK68192.1| 376|Caenorhabditis elegans Hypothetical pr... 77 8e-15
AL110485-8|CAB60356.1| 434|Caenorhabditis elegans Hypothetical ... 75 3e-14
Z50874-3|CAA90773.1| 409|Caenorhabditis elegans Hypothetical pr... 71 7e-13
Z50874-2|CAA90772.1| 357|Caenorhabditis elegans Hypothetical pr... 71 7e-13
Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical pr... 66 2e-11
U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA bi... 66 2e-11
Z36752-6|CAA85327.1| 456|Caenorhabditis elegans Hypothetical pr... 65 5e-11
D10877-1|BAA01645.1| 346|Caenorhabditis elegans hnRNP like prot... 60 1e-09
AF038613-8|AAL02515.2| 309|Caenorhabditis elegans Human hnrnp a... 60 1e-09
AF038613-7|ABB51185.1| 308|Caenorhabditis elegans Human hnrnp a... 60 1e-09
AF038613-6|ABB51186.1| 347|Caenorhabditis elegans Human hnrnp a... 60 1e-09
AF038613-5|AAB92051.1| 346|Caenorhabditis elegans Human hnrnp a... 60 1e-09
U41531-7|AAA83161.2| 415|Caenorhabditis elegans Feminizing gene... 60 2e-09
U14946-1|AAA67723.1| 415|Caenorhabditis elegans ribonucleoprote... 60 2e-09
Z83127-4|CAB05631.1| 872|Caenorhabditis elegans Hypothetical pr... 56 2e-08
U80455-2|AAB37882.2| 420|Caenorhabditis elegans Elav-type rna b... 56 2e-08
U80455-1|AAB37881.1| 584|Caenorhabditis elegans Elav-type rna b... 56 2e-08
U53931-1|AAA98566.1| 584|Caenorhabditis elegans elav-type ribon... 56 2e-08
EF523770-1|ABS18836.1| 513|Caenorhabditis elegans ELAV-type RNA... 56 2e-08
EF523766-1|ABS18832.1| 584|Caenorhabditis elegans ELAV-type RNA... 56 2e-08
AC024791-23|AAM81102.1| 346|Caenorhabditis elegans Rnp (rrm rna... 56 3e-08
AC024791-22|AAF60676.1| 339|Caenorhabditis elegans Rnp (rrm rna... 56 3e-08
AC024791-21|AAF60666.1| 749|Caenorhabditis elegans Rnp (rrm rna... 56 3e-08
Z36238-3|CAA85276.1| 404|Caenorhabditis elegans Hypothetical pr... 54 7e-08
DQ485531-1|ABF22491.1| 404|Caenorhabditis elegans RNA-binding p... 54 7e-08
Z81473-3|CAB03896.4| 514|Caenorhabditis elegans Hypothetical pr... 54 1e-07
AY342388-1|AAQ19851.1| 514|Caenorhabditis elegans putative RNA-... 54 1e-07
Z73102-13|CAA97405.1| 836|Caenorhabditis elegans Hypothetical p... 53 2e-07
Z35601-1|CAA84667.2| 320|Caenorhabditis elegans Hypothetical pr... 52 3e-07
AB036738-1|BAB13470.1| 320|Caenorhabditis elegans neural RNA-bi... 52 3e-07
Z83230-6|CAB05746.1| 336|Caenorhabditis elegans Hypothetical pr... 52 4e-07
AC024826-10|AAM97977.1| 435|Caenorhabditis elegans Hypothetical... 52 4e-07
AC024826-8|AAF60795.2| 580|Caenorhabditis elegans Hypothetical ... 52 4e-07
AC024818-2|AAF60781.1| 302|Caenorhabditis elegans Temporarily a... 52 4e-07
Z36238-4|CAD82915.1| 286|Caenorhabditis elegans Hypothetical pr... 51 6e-07
AF098501-6|AAL38960.1| 315|Caenorhabditis elegans Hypothetical ... 51 8e-07
AF098501-5|AAM69104.1| 335|Caenorhabditis elegans Hypothetical ... 51 8e-07
AF098501-4|AAL38959.1| 336|Caenorhabditis elegans Hypothetical ... 51 8e-07
AF047662-1|AAC04442.1| 248|Caenorhabditis elegans Suppressor pr... 51 8e-07
Z81108-1|CAB03236.1| 83|Caenorhabditis elegans Hypothetical pr... 50 1e-06
U55363-5|AAA97963.1| 351|Caenorhabditis elegans Spindle orienta... 48 8e-06
AB052819-1|BAC65239.1| 351|Caenorhabditis elegans PIP-1 protein. 48 8e-06
EF523769-1|ABS18835.1| 327|Caenorhabditis elegans ELAV-type RNA... 47 1e-05
EF523768-1|ABS18834.1| 378|Caenorhabditis elegans ELAV-type RNA... 47 1e-05
Z81106-3|CAB03222.1| 84|Caenorhabditis elegans Hypothetical pr... 46 3e-05
AL117204-22|CAB55151.1| 331|Caenorhabditis elegans Hypothetical... 45 5e-05
AL137227-1|CAB70238.2| 611|Caenorhabditis elegans Hypothetical ... 44 7e-05
Z83119-2|CAB05579.2| 608|Caenorhabditis elegans Hypothetical pr... 44 9e-05
Z81108-4|CAB03237.1| 85|Caenorhabditis elegans Hypothetical pr... 44 9e-05
Z77669-6|CAB01243.2| 371|Caenorhabditis elegans Hypothetical pr... 44 1e-04
U39997-3|AAK68389.1| 498|Caenorhabditis elegans Human daz (dele... 44 1e-04
AB025253-1|BAA88577.1| 499|Caenorhabditis elegans DAZ-1 protein. 44 1e-04
Z50044-2|CAA90354.1| 256|Caenorhabditis elegans Hypothetical pr... 43 2e-04
U79157-1|AAC26982.1| 496|Caenorhabditis elegans splicing factor... 43 2e-04
AC024875-3|AAK29989.1| 496|Caenorhabditis elegans U2af splicing... 43 2e-04
AC024875-2|AAM44400.1| 471|Caenorhabditis elegans U2af splicing... 43 2e-04
AC024875-1|AAL00879.1| 474|Caenorhabditis elegans U2af splicing... 43 2e-04
Z49910-5|CAA90120.1| 411|Caenorhabditis elegans Hypothetical pr... 42 3e-04
Z75552-9|CAA99945.2| 705|Caenorhabditis elegans Hypothetical pr... 41 9e-04
Z75551-6|CAA99937.2| 705|Caenorhabditis elegans Hypothetical pr... 41 9e-04
AL132904-14|CAC35847.2| 258|Caenorhabditis elegans Hypothetical... 40 0.001
AF242767-1|AAG36874.1| 258|Caenorhabditis elegans SF2 protein. 40 0.001
U23484-3|AAK68298.1| 126|Caenorhabditis elegans Sr protein (spl... 40 0.002
U23484-2|AAC46767.1| 196|Caenorhabditis elegans Sr protein (spl... 40 0.002
U21320-5|AAA62536.2| 332|Caenorhabditis elegans Rnp (rrm rna bi... 40 0.002
AC084197-11|AAM44397.1| 305|Caenorhabditis elegans Homologous t... 40 0.002
AC084197-10|AAY43984.1| 308|Caenorhabditis elegans Homologous t... 40 0.002
Z92826-4|CAB07322.1| 309|Caenorhabditis elegans Hypothetical pr... 39 0.003
Z66521-4|CAD59160.1| 150|Caenorhabditis elegans Hypothetical pr... 39 0.003
Z66521-3|CAD59159.1| 148|Caenorhabditis elegans Hypothetical pr... 39 0.003
Z66521-2|CAA91395.1| 312|Caenorhabditis elegans Hypothetical pr... 39 0.003
AC024844-6|AAK29956.1| 442|Caenorhabditis elegans Hypothetical ... 39 0.003
Z69384-5|CAA93419.2| 408|Caenorhabditis elegans Hypothetical pr... 39 0.004
Z66521-8|CAA91394.1| 281|Caenorhabditis elegans Hypothetical pr... 38 0.005
AL032626-17|CAA21536.1| 282|Caenorhabditis elegans Hypothetical... 37 0.011
AF040642-5|AAN73870.2| 138|Caenorhabditis elegans Hypothetical ... 37 0.014
Z81038-2|CAB02757.1| 454|Caenorhabditis elegans Hypothetical pr... 36 0.025
U80455-3|AAO38606.1| 145|Caenorhabditis elegans Elav-type rna b... 36 0.025
U23450-2|AAK31468.1| 302|Caenorhabditis elegans Hypothetical pr... 36 0.033
AC006833-6|AAF60950.1| 491|Caenorhabditis elegans Hypothetical ... 36 0.033
Z81120-1|CAB03342.1| 207|Caenorhabditis elegans Hypothetical pr... 34 0.076
U41007-10|AAL32214.1| 118|Caenorhabditis elegans Sr protein (sp... 34 0.10
U41007-9|AAL32213.1| 153|Caenorhabditis elegans Sr protein (spl... 34 0.10
U41007-8|AAA82270.1| 179|Caenorhabditis elegans Sr protein (spl... 34 0.10
AL117204-23|CAB55137.1| 285|Caenorhabditis elegans Hypothetical... 33 0.18
U28738-11|AAK68399.3| 166|Caenorhabditis elegans Sr protein (sp... 32 0.31
U28738-10|AAK72066.3| 208|Caenorhabditis elegans Sr protein (sp... 32 0.31
U28738-9|AAA68314.3| 208|Caenorhabditis elegans Sr protein (spl... 32 0.31
U23172-15|AAN63408.1| 374|Caenorhabditis elegans Hypothetical p... 31 0.54
U23172-12|ABH03526.1| 562|Caenorhabditis elegans Hypothetical p... 31 0.54
EF523767-1|ABS18833.1| 193|Caenorhabditis elegans ELAV-type RNA... 31 0.54
AF125462-4|AAD12859.1| 1219|Caenorhabditis elegans Heavy chain, ... 31 0.54
Z49910-7|CAA90124.4| 384|Caenorhabditis elegans Hypothetical pr... 31 0.71
U00052-10|AAK21429.2| 289|Caenorhabditis elegans Rnp (rrm rna b... 31 0.71
U28944-8|AAK68193.1| 103|Caenorhabditis elegans Hypothetical pr... 31 0.94
U64859-3|AAC69093.2| 447|Caenorhabditis elegans Innexin protein... 30 1.2
AF098993-1|AAC67471.2| 367|Caenorhabditis elegans Zinc finger t... 30 1.6
Z35637-3|CAA84689.1| 244|Caenorhabditis elegans Hypothetical pr... 29 3.8
AF106582-4|AAC78219.1| 456|Caenorhabditis elegans Hypothetical ... 29 3.8
AF040648-3|AAL06034.2| 453|Caenorhabditis elegans Hypothetical ... 29 3.8
AF040648-1|AAK21412.1| 519|Caenorhabditis elegans Hypothetical ... 29 3.8
AB007816-1|BAA28352.1| 394|Caenorhabditis elegans matrix metall... 29 3.8
AF068711-1|AAC17775.2| 1121|Caenorhabditis elegans Hypothetical ... 28 5.0
AF016422-6|AAY86271.1| 128|Caenorhabditis elegans Hypothetical ... 28 5.0
Z77654-1|CAB01127.1| 114|Caenorhabditis elegans Hypothetical pr... 28 6.6
U97010-1|AAB52322.1| 334|Caenorhabditis elegans Hypothetical pr... 28 6.6
U39653-1|AAM69065.2| 2471|Caenorhabditis elegans Hypothetical pr... 28 6.6
AC006663-2|AAF39900.2| 603|Caenorhabditis elegans Hypothetical ... 28 6.6
Z77132-4|CAB00862.3| 536|Caenorhabditis elegans Hypothetical pr... 27 8.7
Z75711-3|CAB00035.3| 1204|Caenorhabditis elegans Hypothetical pr... 27 8.7
Z73906-2|CAA98115.1| 586|Caenorhabditis elegans Hypothetical pr... 27 8.7
Z70750-1|CAA94736.2| 362|Caenorhabditis elegans Hypothetical pr... 27 8.7
U55857-6|AAA98032.2| 206|Caenorhabditis elegans Rnp (rrm rna bi... 27 8.7
U32305-18|AAK18852.2| 719|Caenorhabditis elegans Hypothetical p... 27 8.7
AF083225-1|AAD03683.1| 536|Caenorhabditis elegans nuclear recep... 27 8.7
AF040657-1|AAB95054.1| 758|Caenorhabditis elegans Hypothetical ... 27 8.7
AF016449-13|AAG24003.1| 350|Caenorhabditis elegans Serpentine r... 27 8.7
AC006757-3|AAF60541.2| 916|Caenorhabditis elegans Hypothetical ... 27 8.7
>AL032631-3|CAE54916.1| 583|Caenorhabditis elegans Hypothetical
protein Y106G6H.2b protein.
Length = 583
Score = 259 bits (635), Expect = 1e-69
Identities = 131/215 (60%), Positives = 165/215 (76%), Gaps = 3/215 (1%)
Frame = +3
Query: 12 EEAANKSIEKVNGMLLNGKMVYVGRFIPRKEREKELGEKAKLFTNVYVKNFGEDFSDEML 191
EEAA +I+KVNGMLL GK V+VG+F PR +R +ELGE AK FTNVYVKNFG+ ++ E L
Sbjct: 107 EEAAQNAIQKVNGMLLAGKKVFVGKFQPRAQRNRELGETAKQFTNVYVKNFGDHYNKETL 166
Query: 192 KDMFEKYGRITSHKVMYKDDGNSRGFGFVAFEDPDAAERACIELNGKELVEGK--PLYVG 365
+ +F K+G ITS +VM +G S+GFGFVAF +P+ AE A L+ +EG L+V
Sbjct: 167 EKLFAKFGNITSCEVM-TVEGKSKGFGFVAFANPEEAETAVQALH-DSTIEGTDLKLHVC 224
Query: 366 RAQKKAERQKELKRKFEQLKSERLTRYQGVNLYVKNLDDTIDDERLRKEFAPFGTITSAK 545
RAQKK+ER ELK+K EQ K+ER+ +YQGVNLYVKNLD+T+DD+ L+K+F +G ITSAK
Sbjct: 225 RAQKKSERHAELKKKHEQHKAERMQKYQGVNLYVKNLDETVDDDGLKKQFESYGNITSAK 284
Query: 546 VML-EDGRSKGFGFVCFSSPEEATKAVTEMNGRIV 647
VM E+GRSKGFGFVCF PEEAT AVTEMN ++V
Sbjct: 285 VMTDENGRSKGFGFVCFEKPEEATSAVTEMNSKMV 319
Score = 128 bits (309), Expect = 3e-30
Identities = 69/164 (42%), Positives = 100/164 (60%)
Frame = +3
Query: 144 NVYVKNFGEDFSDEMLKDMFEKYGRITSHKVMYKDDGNSRGFGFVAFEDPDAAERACIEL 323
N+++KN + ++ + D F +G I S KV +DG S+G+GFV FE +AA+ A ++
Sbjct: 58 NIFIKNLDKVIDNKSIYDTFSLFGNILSCKVAIDEDGFSKGYGFVHFETEEAAQNAIQKV 117
Query: 324 NGKELVEGKPLYVGRAQKKAERQKELKRKFEQLKSERLTRYQGVNLYVKNLDDTIDDERL 503
NG L+ GK ++VG+ Q +A+R +EL T Q N+YVKN D + E L
Sbjct: 118 NGM-LLAGKKVFVGKFQPRAQRNRELGE----------TAKQFTNVYVKNFGDHYNKETL 166
Query: 504 RKEFAPFGTITSAKVMLEDGRSKGFGFVCFSSPEEATKAVTEMN 635
K FA FG ITS +VM +G+SKGFGFV F++PEEA AV ++
Sbjct: 167 EKLFAKFGNITSCEVMTVEGKSKGFGFVAFANPEEAETAVQALH 210
Score = 96.3 bits (229), Expect = 2e-20
Identities = 51/117 (43%), Positives = 74/117 (63%), Gaps = 3/117 (2%)
Frame = +3
Query: 96 RKEREKELGEKAKLF--TNVYVKNFGEDFSDEMLKDMFEKYGRITSHKVMYKDDGNSRGF 269
+K+ E+ E+ + + N+YVKN E D+ LK FE YG ITS KVM ++G S+GF
Sbjct: 237 KKKHEQHKAERMQKYQGVNLYVKNLDETVDDDGLKKQFESYGNITSAKVMTDENGRSKGF 296
Query: 270 GFVAFEDPDAAERACIELNGKELVEGKPLYVGRAQKKAERQKELKRKF-EQLKSERL 437
GFV FE P+ A A E+N K +V KPLYV AQ+K +R+ +L ++ ++L S R+
Sbjct: 297 GFVCFEKPEEATSAVTEMNSK-MVCSKPLYVAIAQRKEDRRAQLASQYMQRLASMRM 352
Score = 62.5 bits (145), Expect = 3e-10
Identities = 29/65 (44%), Positives = 44/65 (67%), Gaps = 1/65 (1%)
Frame = +3
Query: 456 NLYVKNLDDTIDDERLRKEFAPFGTITSAKVML-EDGRSKGFGFVCFSSPEEATKAVTEM 632
N+++KNLD ID++ + F+ FG I S KV + EDG SKG+GFV F + E A A+ ++
Sbjct: 58 NIFIKNLDKVIDNKSIYDTFSLFGNILSCKVAIDEDGFSKGYGFVHFETEEAAQNAIQKV 117
Query: 633 NGRIV 647
NG ++
Sbjct: 118 NGMLL 122
>AL032631-2|CAA21572.1| 646|Caenorhabditis elegans Hypothetical
protein Y106G6H.2a protein.
Length = 646
Score = 259 bits (635), Expect = 1e-69
Identities = 131/215 (60%), Positives = 165/215 (76%), Gaps = 3/215 (1%)
Frame = +3
Query: 12 EEAANKSIEKVNGMLLNGKMVYVGRFIPRKEREKELGEKAKLFTNVYVKNFGEDFSDEML 191
EEAA +I+KVNGMLL GK V+VG+F PR +R +ELGE AK FTNVYVKNFG+ ++ E L
Sbjct: 170 EEAAQNAIQKVNGMLLAGKKVFVGKFQPRAQRNRELGETAKQFTNVYVKNFGDHYNKETL 229
Query: 192 KDMFEKYGRITSHKVMYKDDGNSRGFGFVAFEDPDAAERACIELNGKELVEGK--PLYVG 365
+ +F K+G ITS +VM +G S+GFGFVAF +P+ AE A L+ +EG L+V
Sbjct: 230 EKLFAKFGNITSCEVM-TVEGKSKGFGFVAFANPEEAETAVQALH-DSTIEGTDLKLHVC 287
Query: 366 RAQKKAERQKELKRKFEQLKSERLTRYQGVNLYVKNLDDTIDDERLRKEFAPFGTITSAK 545
RAQKK+ER ELK+K EQ K+ER+ +YQGVNLYVKNLD+T+DD+ L+K+F +G ITSAK
Sbjct: 288 RAQKKSERHAELKKKHEQHKAERMQKYQGVNLYVKNLDETVDDDGLKKQFESYGNITSAK 347
Query: 546 VML-EDGRSKGFGFVCFSSPEEATKAVTEMNGRIV 647
VM E+GRSKGFGFVCF PEEAT AVTEMN ++V
Sbjct: 348 VMTDENGRSKGFGFVCFEKPEEATSAVTEMNSKMV 382
Score = 128 bits (309), Expect = 3e-30
Identities = 69/164 (42%), Positives = 100/164 (60%)
Frame = +3
Query: 144 NVYVKNFGEDFSDEMLKDMFEKYGRITSHKVMYKDDGNSRGFGFVAFEDPDAAERACIEL 323
N+++KN + ++ + D F +G I S KV +DG S+G+GFV FE +AA+ A ++
Sbjct: 121 NIFIKNLDKVIDNKSIYDTFSLFGNILSCKVAIDEDGFSKGYGFVHFETEEAAQNAIQKV 180
Query: 324 NGKELVEGKPLYVGRAQKKAERQKELKRKFEQLKSERLTRYQGVNLYVKNLDDTIDDERL 503
NG L+ GK ++VG+ Q +A+R +EL T Q N+YVKN D + E L
Sbjct: 181 NGM-LLAGKKVFVGKFQPRAQRNRELGE----------TAKQFTNVYVKNFGDHYNKETL 229
Query: 504 RKEFAPFGTITSAKVMLEDGRSKGFGFVCFSSPEEATKAVTEMN 635
K FA FG ITS +VM +G+SKGFGFV F++PEEA AV ++
Sbjct: 230 EKLFAKFGNITSCEVMTVEGKSKGFGFVAFANPEEAETAVQALH 273
Score = 96.3 bits (229), Expect = 2e-20
Identities = 51/117 (43%), Positives = 74/117 (63%), Gaps = 3/117 (2%)
Frame = +3
Query: 96 RKEREKELGEKAKLF--TNVYVKNFGEDFSDEMLKDMFEKYGRITSHKVMYKDDGNSRGF 269
+K+ E+ E+ + + N+YVKN E D+ LK FE YG ITS KVM ++G S+GF
Sbjct: 300 KKKHEQHKAERMQKYQGVNLYVKNLDETVDDDGLKKQFESYGNITSAKVMTDENGRSKGF 359
Query: 270 GFVAFEDPDAAERACIELNGKELVEGKPLYVGRAQKKAERQKELKRKF-EQLKSERL 437
GFV FE P+ A A E+N K +V KPLYV AQ+K +R+ +L ++ ++L S R+
Sbjct: 360 GFVCFEKPEEATSAVTEMNSK-MVCSKPLYVAIAQRKEDRRAQLASQYMQRLASMRM 415
Score = 77.8 bits (183), Expect = 6e-15
Identities = 54/171 (31%), Positives = 90/171 (52%), Gaps = 3/171 (1%)
Frame = +3
Query: 144 NVYVKNFGEDFSDEMLKDMFEKYGRITSHKVMYKDDGN--SRGFGFVAFEDPDAAERACI 317
++YV + D ++ +L + F G + S +V +D+ S G+ +V F+ P AERA
Sbjct: 33 SLYVGDLHPDVNESILFEKFSAAGPVLSIRVC-RDNATRLSLGYAYVNFQQPADAERAMD 91
Query: 318 ELNGKELVEGKPLYVGRAQKKAERQKELKRKFEQLKSERLTRYQGVNLYVKNLDDTIDDE 497
+N E + GKP+ + +Q+ + R N+++KNLD ID++
Sbjct: 92 TMNF-EALHGKPMRIMWSQR----------------DPAMRRSGAGNIFIKNLDKVIDNK 134
Query: 498 RLRKEFAPFGTITSAKVML-EDGRSKGFGFVCFSSPEEATKAVTEMNGRIV 647
+ F+ FG I S KV + EDG SKG+GFV F + E A A+ ++NG ++
Sbjct: 135 SIYDTFSLFGNILSCKVAIDEDGFSKGYGFVHFETEEAAQNAIQKVNGMLL 185
>U24123-1|AAA65224.1| 646|Caenorhabditis elegans
polyadenylate-binding protein protein.
Length = 646
Score = 259 bits (634), Expect = 1e-69
Identities = 131/215 (60%), Positives = 165/215 (76%), Gaps = 3/215 (1%)
Frame = +3
Query: 12 EEAANKSIEKVNGMLLNGKMVYVGRFIPRKEREKELGEKAKLFTNVYVKNFGEDFSDEML 191
EEAA +I+KVNGMLL GK V+VG+F PR +R +ELGE AK FTNVYVKNFG+ ++ E L
Sbjct: 170 EEAAQNAIQKVNGMLLAGKKVFVGKFQPRAQRNRELGETAKQFTNVYVKNFGDHYNKETL 229
Query: 192 KDMFEKYGRITSHKVMYKDDGNSRGFGFVAFEDPDAAERACIELNGKELVEGK--PLYVG 365
+ +F K+G ITS +VM +G S+GFGFVAF +P+ AE A L+ +EG L+V
Sbjct: 230 EKVFAKFGNITSCEVM-TVEGKSKGFGFVAFANPEEAETAVQALH-DSTIEGTDLKLHVC 287
Query: 366 RAQKKAERQKELKRKFEQLKSERLTRYQGVNLYVKNLDDTIDDERLRKEFAPFGTITSAK 545
RAQKK+ER ELK+K EQ K+ER+ +YQGVNLYVKNLD+T+DD+ L+K+F +G ITSAK
Sbjct: 288 RAQKKSERHAELKKKHEQHKAERMQKYQGVNLYVKNLDETVDDDGLKKQFESYGNITSAK 347
Query: 546 VML-EDGRSKGFGFVCFSSPEEATKAVTEMNGRIV 647
VM E+GRSKGFGFVCF PEEAT AVTEMN ++V
Sbjct: 348 VMTDENGRSKGFGFVCFEKPEEATSAVTEMNSKMV 382
Score = 128 bits (310), Expect = 3e-30
Identities = 69/164 (42%), Positives = 100/164 (60%)
Frame = +3
Query: 144 NVYVKNFGEDFSDEMLKDMFEKYGRITSHKVMYKDDGNSRGFGFVAFEDPDAAERACIEL 323
N+++KN + ++ + D F +G I S KV +DG S+G+GFV FE +AA+ A ++
Sbjct: 121 NIFIKNLDKVIDNKSIYDTFSLFGNILSCKVAIDEDGFSKGYGFVHFETEEAAQNAIQKV 180
Query: 324 NGKELVEGKPLYVGRAQKKAERQKELKRKFEQLKSERLTRYQGVNLYVKNLDDTIDDERL 503
NG L+ GK ++VG+ Q +A+R +EL T Q N+YVKN D + E L
Sbjct: 181 NGM-LLAGKKVFVGKFQPRAQRNRELGE----------TAKQFTNVYVKNFGDHYNKETL 229
Query: 504 RKEFAPFGTITSAKVMLEDGRSKGFGFVCFSSPEEATKAVTEMN 635
K FA FG ITS +VM +G+SKGFGFV F++PEEA AV ++
Sbjct: 230 EKVFAKFGNITSCEVMTVEGKSKGFGFVAFANPEEAETAVQALH 273
Score = 94.3 bits (224), Expect = 7e-20
Identities = 48/110 (43%), Positives = 68/110 (61%), Gaps = 2/110 (1%)
Frame = +3
Query: 96 RKEREKELGEKAKLF--TNVYVKNFGEDFSDEMLKDMFEKYGRITSHKVMYKDDGNSRGF 269
+K+ E+ E+ + + N+YVKN E D+ LK FE YG ITS KVM ++G S+GF
Sbjct: 300 KKKHEQHKAERMQKYQGVNLYVKNLDETVDDDGLKKQFESYGNITSAKVMTDENGRSKGF 359
Query: 270 GFVAFEDPDAAERACIELNGKELVEGKPLYVGRAQKKAERQKELKRKFEQ 419
GFV FE P+ A A E+N K +V KPLYV Q+K +R+ +L ++ Q
Sbjct: 360 GFVCFEKPEEATSAVTEMNSK-MVCSKPLYVAIGQRKEDRRAQLASQYMQ 408
Score = 77.8 bits (183), Expect = 6e-15
Identities = 54/171 (31%), Positives = 90/171 (52%), Gaps = 3/171 (1%)
Frame = +3
Query: 144 NVYVKNFGEDFSDEMLKDMFEKYGRITSHKVMYKDDGN--SRGFGFVAFEDPDAAERACI 317
++YV + D ++ +L + F G + S +V +D+ S G+ +V F+ P AERA
Sbjct: 33 SLYVGDLHPDVNESILFEKFSAAGPVLSIRVC-RDNATRLSLGYAYVNFQQPADAERAMD 91
Query: 318 ELNGKELVEGKPLYVGRAQKKAERQKELKRKFEQLKSERLTRYQGVNLYVKNLDDTIDDE 497
+N E + GKP+ + +Q+ + R N+++KNLD ID++
Sbjct: 92 TMNF-EALHGKPMRIMWSQR----------------DPAMRRSGAGNIFIKNLDKVIDNK 134
Query: 498 RLRKEFAPFGTITSAKVML-EDGRSKGFGFVCFSSPEEATKAVTEMNGRIV 647
+ F+ FG I S KV + EDG SKG+GFV F + E A A+ ++NG ++
Sbjct: 135 SIYDTFSLFGNILSCKVAIDEDGFSKGYGFVHFETEEAAQNAIQKVNGMLL 185
>Z50110-2|CAA90446.1| 566|Caenorhabditis elegans Hypothetical
protein F18H3.3b protein.
Length = 566
Score = 253 bits (620), Expect = 7e-68
Identities = 129/216 (59%), Positives = 158/216 (73%), Gaps = 3/216 (1%)
Frame = +3
Query: 12 EEAANKSIEKVNGMLLNGKMVYVGRFIPRKEREKELGEKAKLFTNVYVKNFGEDFSDEML 191
E +A +IEKVNGMLL+ K VYVG+F PR +R KELGE +TNV+VKNFGE E L
Sbjct: 195 EHSAQTAIEKVNGMLLSDKKVYVGKFQPRAQRMKELGESGLKYTNVFVKNFGEHLDQEKL 254
Query: 192 KDMFEKYGRITSHKVMYKDDGNSRGFGFVAFEDPDAAERACIELNGKELVEGK--PLYVG 365
MF K+G ITS VM G +GFGFVAF D DAA +A +LN ++EG L V
Sbjct: 255 SAMFSKFGEITSAVVMTDAQGKPKGFGFVAFADQDAAGQAVEKLN-DSILEGTDCKLSVC 313
Query: 366 RAQKKAERQKELKRKFEQLKSERLTRYQGVNLYVKNLDDTIDDERLRKEFAPFGTITSAK 545
RAQKK+ER ELKRK+E LK ER+ RYQGVNLYVKN+++ ++D+ LR F+ FGTITSAK
Sbjct: 314 RAQKKSERSAELKRKYEALKQERVQRYQGVNLYVKNIEEDLNDDGLRDHFSSFGTITSAK 373
Query: 546 VML-EDGRSKGFGFVCFSSPEEATKAVTEMNGRIVG 650
VM+ E+GRSKGFGFVCF PEEAT AVT+MN +++G
Sbjct: 374 VMVDENGRSKGFGFVCFEKPEEATAAVTDMNSKMIG 409
Score = 116 bits (280), Expect = 1e-26
Identities = 66/169 (39%), Positives = 100/169 (59%), Gaps = 1/169 (0%)
Frame = +3
Query: 144 NVYVKNFGEDFSDEMLKDMFEKYGRITSHKVMYKDDGNSRGFGFVAFEDPDAAERACIEL 323
N+++KN ++ + D F +G I S KV D+GNS+G+GFV FE +A+ A ++
Sbjct: 146 NIFIKNLDRVIDNKSVYDTFSLFGNILSCKVATDDEGNSKGYGFVHFETEHSAQTAIEKV 205
Query: 324 NGKELVEGKPLYVGRAQKKAERQKELKRKFEQLKSERLTRYQGVNLYVKNLDDTIDDERL 503
NG L+ K +YVG+ Q +A+R KEL E +Y N++VKN + +D E+L
Sbjct: 206 NGM-LLSDKKVYVGKFQPRAQRMKEL--------GESGLKY--TNVFVKNFGEHLDQEKL 254
Query: 504 RKEFAPFGTITSAKVMLE-DGRSKGFGFVCFSSPEEATKAVTEMNGRIV 647
F+ FG ITSA VM + G+ KGFGFV F+ + A +AV ++N I+
Sbjct: 255 SAMFSKFGEITSAVVMTDAQGKPKGFGFVAFADQDAAGQAVEKLNDSIL 303
Score = 101 bits (241), Expect = 6e-22
Identities = 57/148 (38%), Positives = 86/148 (58%), Gaps = 12/148 (8%)
Frame = +3
Query: 12 EEAANKSIEKVNGMLLNGK--MVYVGRFIPRKEREKELGEKAKLF----------TNVYV 155
++AA +++EK+N +L G + V R + ER EL K + N+YV
Sbjct: 288 QDAAGQAVEKLNDSILEGTDCKLSVCRAQKKSERSAELKRKYEALKQERVQRYQGVNLYV 347
Query: 156 KNFGEDFSDEMLKDMFEKYGRITSHKVMYKDDGNSRGFGFVAFEDPDAAERACIELNGKE 335
KN ED +D+ L+D F +G ITS KVM ++G S+GFGFV FE P+ A A ++N K
Sbjct: 348 KNIEEDLNDDGLRDHFSSFGTITSAKVMVDENGRSKGFGFVCFEKPEEATAAVTDMNSK- 406
Query: 336 LVEGKPLYVGRAQKKAERQKELKRKFEQ 419
++ KPLYV AQ+K +R+ +L ++ Q
Sbjct: 407 MIGAKPLYVALAQRKEDRRAQLASQYMQ 434
>Z50110-1|CAA90444.1| 692|Caenorhabditis elegans Hypothetical
protein F18H3.3a protein.
Length = 692
Score = 253 bits (620), Expect = 7e-68
Identities = 129/216 (59%), Positives = 158/216 (73%), Gaps = 3/216 (1%)
Frame = +3
Query: 12 EEAANKSIEKVNGMLLNGKMVYVGRFIPRKEREKELGEKAKLFTNVYVKNFGEDFSDEML 191
E +A +IEKVNGMLL+ K VYVG+F PR +R KELGE +TNV+VKNFGE E L
Sbjct: 195 EHSAQTAIEKVNGMLLSDKKVYVGKFQPRAQRMKELGESGLKYTNVFVKNFGEHLDQEKL 254
Query: 192 KDMFEKYGRITSHKVMYKDDGNSRGFGFVAFEDPDAAERACIELNGKELVEGK--PLYVG 365
MF K+G ITS VM G +GFGFVAF D DAA +A +LN ++EG L V
Sbjct: 255 SAMFSKFGEITSAVVMTDAQGKPKGFGFVAFADQDAAGQAVEKLN-DSILEGTDCKLSVC 313
Query: 366 RAQKKAERQKELKRKFEQLKSERLTRYQGVNLYVKNLDDTIDDERLRKEFAPFGTITSAK 545
RAQKK+ER ELKRK+E LK ER+ RYQGVNLYVKN+++ ++D+ LR F+ FGTITSAK
Sbjct: 314 RAQKKSERSAELKRKYEALKQERVQRYQGVNLYVKNIEEDLNDDGLRDHFSSFGTITSAK 373
Query: 546 VML-EDGRSKGFGFVCFSSPEEATKAVTEMNGRIVG 650
VM+ E+GRSKGFGFVCF PEEAT AVT+MN +++G
Sbjct: 374 VMVDENGRSKGFGFVCFEKPEEATAAVTDMNSKMIG 409
Score = 116 bits (280), Expect = 1e-26
Identities = 66/169 (39%), Positives = 100/169 (59%), Gaps = 1/169 (0%)
Frame = +3
Query: 144 NVYVKNFGEDFSDEMLKDMFEKYGRITSHKVMYKDDGNSRGFGFVAFEDPDAAERACIEL 323
N+++KN ++ + D F +G I S KV D+GNS+G+GFV FE +A+ A ++
Sbjct: 146 NIFIKNLDRVIDNKSVYDTFSLFGNILSCKVATDDEGNSKGYGFVHFETEHSAQTAIEKV 205
Query: 324 NGKELVEGKPLYVGRAQKKAERQKELKRKFEQLKSERLTRYQGVNLYVKNLDDTIDDERL 503
NG L+ K +YVG+ Q +A+R KEL E +Y N++VKN + +D E+L
Sbjct: 206 NGM-LLSDKKVYVGKFQPRAQRMKEL--------GESGLKY--TNVFVKNFGEHLDQEKL 254
Query: 504 RKEFAPFGTITSAKVMLE-DGRSKGFGFVCFSSPEEATKAVTEMNGRIV 647
F+ FG ITSA VM + G+ KGFGFV F+ + A +AV ++N I+
Sbjct: 255 SAMFSKFGEITSAVVMTDAQGKPKGFGFVAFADQDAAGQAVEKLNDSIL 303
Score = 101 bits (241), Expect = 6e-22
Identities = 57/148 (38%), Positives = 86/148 (58%), Gaps = 12/148 (8%)
Frame = +3
Query: 12 EEAANKSIEKVNGMLLNGK--MVYVGRFIPRKEREKELGEKAKLF----------TNVYV 155
++AA +++EK+N +L G + V R + ER EL K + N+YV
Sbjct: 288 QDAAGQAVEKLNDSILEGTDCKLSVCRAQKKSERSAELKRKYEALKQERVQRYQGVNLYV 347
Query: 156 KNFGEDFSDEMLKDMFEKYGRITSHKVMYKDDGNSRGFGFVAFEDPDAAERACIELNGKE 335
KN ED +D+ L+D F +G ITS KVM ++G S+GFGFV FE P+ A A ++N K
Sbjct: 348 KNIEEDLNDDGLRDHFSSFGTITSAKVMVDENGRSKGFGFVCFEKPEEATAAVTDMNSK- 406
Query: 336 LVEGKPLYVGRAQKKAERQKELKRKFEQ 419
++ KPLYV AQ+K +R+ +L ++ Q
Sbjct: 407 MIGAKPLYVALAQRKEDRRAQLASQYMQ 434
>AL032631-4|CAE54917.1| 586|Caenorhabditis elegans Hypothetical
protein Y106G6H.2c protein.
Length = 586
Score = 233 bits (570), Expect = 8e-62
Identities = 119/204 (58%), Positives = 152/204 (74%), Gaps = 3/204 (1%)
Frame = +3
Query: 45 NGMLLNGKMVYVGRFIPRKEREKELGEKAKLFTNVYVKNFGEDFSDEMLKDMFEKYGRIT 224
N + N V+VG+F PR +R +ELGE AK FTNVYVKNFG+ ++ E L+ +F K+G IT
Sbjct: 121 NIFIKNLDKVFVGKFQPRAQRNRELGETAKQFTNVYVKNFGDHYNKETLEKLFAKFGNIT 180
Query: 225 SHKVMYKDDGNSRGFGFVAFEDPDAAERACIELNGKELVEGKPL--YVGRAQKKAERQKE 398
S +VM + G S+GFGFVAF +P+ AE A L+ +EG L +V RAQKK+ER E
Sbjct: 181 SCEVMTVE-GKSKGFGFVAFANPEEAETAVQALHDST-IEGTDLKLHVCRAQKKSERHAE 238
Query: 399 LKRKFEQLKSERLTRYQGVNLYVKNLDDTIDDERLRKEFAPFGTITSAKVML-EDGRSKG 575
LK+K EQ K+ER+ +YQGVNLYVKNLD+T+DD+ L+K+F +G ITSAKVM E+GRSKG
Sbjct: 239 LKKKHEQHKAERMQKYQGVNLYVKNLDETVDDDGLKKQFESYGNITSAKVMTDENGRSKG 298
Query: 576 FGFVCFSSPEEATKAVTEMNGRIV 647
FGFVCF PEEAT AVTEMN ++V
Sbjct: 299 FGFVCFEKPEEATSAVTEMNSKMV 322
Score = 96.3 bits (229), Expect = 2e-20
Identities = 51/117 (43%), Positives = 74/117 (63%), Gaps = 3/117 (2%)
Frame = +3
Query: 96 RKEREKELGEKAKLF--TNVYVKNFGEDFSDEMLKDMFEKYGRITSHKVMYKDDGNSRGF 269
+K+ E+ E+ + + N+YVKN E D+ LK FE YG ITS KVM ++G S+GF
Sbjct: 240 KKKHEQHKAERMQKYQGVNLYVKNLDETVDDDGLKKQFESYGNITSAKVMTDENGRSKGF 299
Query: 270 GFVAFEDPDAAERACIELNGKELVEGKPLYVGRAQKKAERQKELKRKF-EQLKSERL 437
GFV FE P+ A A E+N K +V KPLYV AQ+K +R+ +L ++ ++L S R+
Sbjct: 300 GFVCFEKPEEATSAVTEMNSK-MVCSKPLYVAIAQRKEDRRAQLASQYMQRLASMRM 355
>Z78536-3|CAB01717.2| 360|Caenorhabditis elegans Hypothetical
protein C07A4.1 protein.
Length = 360
Score = 85.8 bits (203), Expect = 2e-17
Identities = 52/167 (31%), Positives = 90/167 (53%), Gaps = 1/167 (0%)
Frame = +3
Query: 144 NVYVKNFGEDFSDEMLKDMFEKYGRITSHKVMYK-DDGNSRGFGFVAFEDPDAAERACIE 320
+V+V + +D S+E+LK F K+G ++ KV+ S+G+GFV+F + AE A
Sbjct: 136 HVFVGDLSKDVSNELLKSTFTKFGEVSEAKVIRDVQTQKSKGYGFVSFPNKQNAENAIAG 195
Query: 321 LNGKELVEGKPLYVGRAQKKAERQKELKRKFEQLKSERLTRYQGVNLYVKNLDDTIDDER 500
+NGK + + A+K +E ++ K FEQ+ + T+ ++YV N+ D
Sbjct: 196 MNGKWIGKRAVRTNWAARKNSEENRD-KLTFEQVFNS--TKADNTSVYVGNISQQTTDAD 252
Query: 501 LRKEFAPFGTITSAKVMLEDGRSKGFGFVCFSSPEEATKAVTEMNGR 641
LR F+ +G I ++ +++ + FV + E ATKA+ EMNG+
Sbjct: 253 LRDLFSTYGDIAEVRIF----KTQRYAFVRYEKKECATKAIMEMNGK 295
Score = 52.0 bits (119), Expect = 4e-07
Identities = 24/75 (32%), Positives = 45/75 (60%), Gaps = 2/75 (2%)
Frame = +3
Query: 432 RLTRYQGVNLYVKNLDDTIDDERLRKEFAPFGTITSAKVM--LEDGRSKGFGFVCFSSPE 605
R+ + +++V +L + +E L+ F FG ++ AKV+ ++ +SKG+GFV F + +
Sbjct: 128 RIDTSKHFHVFVGDLSKDVSNELLKSTFTKFGEVSEAKVIRDVQTQKSKGYGFVSFPNKQ 187
Query: 606 EATKAVTEMNGRIVG 650
A A+ MNG+ +G
Sbjct: 188 NAENAIAGMNGKWIG 202
Score = 46.4 bits (105), Expect = 2e-05
Identities = 22/66 (33%), Positives = 38/66 (57%)
Frame = +3
Query: 141 TNVYVKNFGEDFSDEMLKDMFEKYGRITSHKVMYKDDGNSRGFGFVAFEDPDAAERACIE 320
T+VYV N + +D L+D+F YG I ++ ++ + FV +E + A +A +E
Sbjct: 237 TSVYVGNISQQTTDADLRDLFSTYGDIAEVRIF-----KTQRYAFVRYEKKECATKAIME 291
Query: 321 LNGKEL 338
+NGKE+
Sbjct: 292 MNGKEM 297
>U28944-5|AAK68191.1| 408|Caenorhabditis elegans Hypothetical
protein C18A3.5a protein.
Length = 408
Score = 84.2 bits (199), Expect = 7e-17
Identities = 55/186 (29%), Positives = 101/186 (54%), Gaps = 3/186 (1%)
Frame = +3
Query: 102 EREK-ELGEKAKLFTNVYVKNFGEDFSDEMLKDMFEKYGRITSHKVMYKDDGNSRGFGFV 278
ERE LG + +YV N +++ + +F + G +T KV++ DG++ + FV
Sbjct: 32 EREGFHLGNGSDEPRTLYVGNLDSTVTEDFIATLFNQIGSVTKTKVIF--DGSNDPYAFV 89
Query: 279 AFEDPDAAERACIELNGKELVEGKPLYVGRAQKKAERQKELKRKFEQLKSERLTRYQGVN 458
F D A +A +N K L+ + + V A + ++Q ++ TR+ +
Sbjct: 90 EFSDHGQASQALQTMN-KRLLLDREMKVNWAVEPGQQQSKIDT----------TRH--FH 136
Query: 459 LYVKNLDDTIDDERLRKEFAPFGTITSAKVMLEDG--RSKGFGFVCFSSPEEATKAVTEM 632
++V +L +D+++LR+ F PFG ++ AKV+ + +SKG+GFV + EEA +A+ +M
Sbjct: 137 VFVGDLSSEVDNQKLREAFQPFGDVSDAKVIRDTNTTKSKGYGFVSYPKREEAERAIEQM 196
Query: 633 NGRIVG 650
NG+ +G
Sbjct: 197 NGQWLG 202
Score = 79.8 bits (188), Expect = 2e-15
Identities = 55/213 (25%), Positives = 115/213 (53%), Gaps = 3/213 (1%)
Frame = +3
Query: 21 ANKSIEKVNGMLLNGKMVYVGRFIPRKEREKELGEKAKLFTNVYVKNFGEDFSDEMLKDM 200
A+++++ +N LL + + V + +++ ++ + + F +V+V + + ++ L++
Sbjct: 97 ASQALQTMNKRLLLDREMKVNWAVEPGQQQSKI-DTTRHF-HVFVGDLSSEVDNQKLREA 154
Query: 201 FEKYGRITSHKVMYKDDGN-SRGFGFVAFEDPDAAERACIELNGKELVEGKPLYVGRAQK 377
F+ +G ++ KV+ + S+G+GFV++ + AERA ++NG+ L + + A +
Sbjct: 155 FQPFGDVSDAKVIRDTNTTKSKGYGFVSYPKREEAERAIEQMNGQWLGR-RTIRTNWATR 213
Query: 378 KAERQKELKRKFEQLKSERLTRYQGVN--LYVKNLDDTIDDERLRKEFAPFGTITSAKVM 551
K Q++ E+ E + G N +YV N+ +DE +R+ FA FG IT ++
Sbjct: 214 KPGDQEKPSHYNEKSYDEIYNQTSGDNTSVYVGNIASLTEDE-IRQGFASFGRITEVRIF 272
Query: 552 LEDGRSKGFGFVCFSSPEEATKAVTEMNGRIVG 650
+ +G+ FV F + + A KA+ +MN + VG
Sbjct: 273 ----KMQGYAFVKFDNKDAAAKAIVQMNNQDVG 301
>U28944-7|AAN63457.1| 295|Caenorhabditis elegans Hypothetical
protein C18A3.5f protein.
Length = 295
Score = 77.4 bits (182), Expect = 8e-15
Identities = 49/172 (28%), Positives = 93/172 (54%), Gaps = 3/172 (1%)
Frame = +3
Query: 144 NVYVKNFGEDFSDEMLKDMFEKYGRITSHKVMYKDDGN-SRGFGFVAFEDPDAAERACIE 320
+V+V + + ++ L++ F+ +G ++ KV+ + S+G+GFV++ + AERA +
Sbjct: 23 HVFVGDLSSEVDNQKLREAFQPFGDVSDAKVIRDTNTTKSKGYGFVSYPKREEAERAIEQ 82
Query: 321 LNGKELVEGKPLYVGRAQKKAERQKELKRKFEQLKSERLTRYQGVN--LYVKNLDDTIDD 494
+NG+ L + + A +K Q++ E+ E + G N +YV N+ +D
Sbjct: 83 MNGQWLGR-RTIRTNWATRKPGDQEKPSHYNEKSYDEIYNQTSGDNTSVYVGNIASLTED 141
Query: 495 ERLRKEFAPFGTITSAKVMLEDGRSKGFGFVCFSSPEEATKAVTEMNGRIVG 650
E +R+ FA FG IT ++ + +G+ FV F + + A KA+ +MN + VG
Sbjct: 142 E-IRQGFASFGRITEVRIF----KMQGYAFVKFDNKDAAAKAIVQMNNQDVG 188
>U28944-6|AAN63456.1| 305|Caenorhabditis elegans Hypothetical
protein C18A3.5e protein.
Length = 305
Score = 77.4 bits (182), Expect = 8e-15
Identities = 49/172 (28%), Positives = 93/172 (54%), Gaps = 3/172 (1%)
Frame = +3
Query: 144 NVYVKNFGEDFSDEMLKDMFEKYGRITSHKVMYKDDGN-SRGFGFVAFEDPDAAERACIE 320
+V+V + + ++ L++ F+ +G ++ KV+ + S+G+GFV++ + AERA +
Sbjct: 33 HVFVGDLSSEVDNQKLREAFQPFGDVSDAKVIRDTNTTKSKGYGFVSYPKREEAERAIEQ 92
Query: 321 LNGKELVEGKPLYVGRAQKKAERQKELKRKFEQLKSERLTRYQGVN--LYVKNLDDTIDD 494
+NG+ L + + A +K Q++ E+ E + G N +YV N+ +D
Sbjct: 93 MNGQWLGR-RTIRTNWATRKPGDQEKPSHYNEKSYDEIYNQTSGDNTSVYVGNIASLTED 151
Query: 495 ERLRKEFAPFGTITSAKVMLEDGRSKGFGFVCFSSPEEATKAVTEMNGRIVG 650
E +R+ FA FG IT ++ + +G+ FV F + + A KA+ +MN + VG
Sbjct: 152 E-IRQGFASFGRITEVRIF----KMQGYAFVKFDNKDAAAKAIVQMNNQDVG 198
>U28944-4|AAK68192.1| 376|Caenorhabditis elegans Hypothetical
protein C18A3.5b protein.
Length = 376
Score = 77.4 bits (182), Expect = 8e-15
Identities = 49/172 (28%), Positives = 93/172 (54%), Gaps = 3/172 (1%)
Frame = +3
Query: 144 NVYVKNFGEDFSDEMLKDMFEKYGRITSHKVMYKDDGN-SRGFGFVAFEDPDAAERACIE 320
+V+V + + ++ L++ F+ +G ++ KV+ + S+G+GFV++ + AERA +
Sbjct: 104 HVFVGDLSSEVDNQKLREAFQPFGDVSDAKVIRDTNTTKSKGYGFVSYPKREEAERAIEQ 163
Query: 321 LNGKELVEGKPLYVGRAQKKAERQKELKRKFEQLKSERLTRYQGVN--LYVKNLDDTIDD 494
+NG+ L + + A +K Q++ E+ E + G N +YV N+ +D
Sbjct: 164 MNGQWLGR-RTIRTNWATRKPGDQEKPSHYNEKSYDEIYNQTSGDNTSVYVGNIASLTED 222
Query: 495 ERLRKEFAPFGTITSAKVMLEDGRSKGFGFVCFSSPEEATKAVTEMNGRIVG 650
E +R+ FA FG IT ++ + +G+ FV F + + A KA+ +MN + VG
Sbjct: 223 E-IRQGFASFGRITEVRIF----KMQGYAFVKFDNKDAAAKAIVQMNNQDVG 269
Score = 30.7 bits (66), Expect = 0.94
Identities = 12/34 (35%), Positives = 21/34 (61%)
Frame = +3
Query: 459 LYVKNLDDTIDDERLRKEFAPFGTITSAKVMLED 560
LYV NLD T+ ++ + F G++T KV+ ++
Sbjct: 48 LYVGNLDSTVTEDFIATLFNQIGSVTKTKVIFDE 81
>AL110485-8|CAB60356.1| 434|Caenorhabditis elegans Hypothetical
protein Y46G5A.13 protein.
Length = 434
Score = 75.4 bits (177), Expect = 3e-14
Identities = 50/170 (29%), Positives = 90/170 (52%), Gaps = 2/170 (1%)
Frame = +3
Query: 147 VYVKNFGEDFSDEMLKDMFEKYGRITSHKVMYKDDGNSRGFGFVAFEDPDAAERACIELN 326
++V N +DE L +F + G + K+++ +G + + FV F D + A A N
Sbjct: 42 LFVANLDPAITDEFLATLFNQIGAVMKAKIIF--EGLNDPYAFVEFSDHNQATLALQSHN 99
Query: 327 GKELVEGKPLYVGRAQKKAERQKELKRKFEQLKSERLTRYQGVNLYVKNLDDTIDDERLR 506
G+EL+E K ++V A + E + + K E + +++V +L ID +LR
Sbjct: 100 GRELLE-KEMHVTWAFEPREPGEN------RSKPETSRHF---HVFVGDLCSEIDSTKLR 149
Query: 507 KEFAPFGTITSAKVMLED--GRSKGFGFVCFSSPEEATKAVTEMNGRIVG 650
+ F FG ++ AK++ ++ + KG+GFV + E+A +A+ EMNG +G
Sbjct: 150 EAFVKFGEVSEAKIIRDNNTNKGKGYGFVSYPRREDAERAIDEMNGAWLG 199
Score = 61.3 bits (142), Expect = 6e-10
Identities = 55/233 (23%), Positives = 108/233 (46%), Gaps = 23/233 (9%)
Frame = +3
Query: 21 ANKSIEKVNGM-LLNGKMVYVGRFIPRKEREKELGEKAKLFTNVYVKNFGEDFSDEMLKD 197
A +++ NG LL +M F PR+ E + +V+V + + L++
Sbjct: 91 ATLALQSHNGRELLEKEMHVTWAFEPREPGENRSKPETSRHFHVFVGDLCSEIDSTKLRE 150
Query: 198 MFEKYGRITSHKVMYKDDGN-SRGFGFVAFEDPDAAERACIELNGKEL---------VEG 347
F K+G ++ K++ ++ N +G+GFV++ + AERA E+NG L
Sbjct: 151 AFVKFGEVSEAKIIRDNNTNKGKGYGFVSYPRREDAERAIDEMNGAWLGRRTIRTNWATR 210
Query: 348 KPLYVG-RAQKKAERQ-----------KELKRKFEQLKSERLTRYQGVNLYVKNLDDTID 491
KP G R + +R+ + ++ ++++ ++ ++YV N+ + +
Sbjct: 211 KPDEDGERGGDRGDRRGGGGGGRDRYHNQSEKTYDEIFNQAAA--DNTSVYVGNIANLGE 268
Query: 492 DERLRKEFAPFGTITSAKVMLEDGRSKGFGFVCFSSPEEATKAVTEMNGRIVG 650
DE +R+ F FG I + + +G+ FV F + E A +A+ +MN +G
Sbjct: 269 DE-IRRAFDRFGPINEVRTF----KIQGYAFVKFETKESAARAIVQMNNADIG 316
>Z50874-3|CAA90773.1| 409|Caenorhabditis elegans Hypothetical
protein R10E4.2b protein.
Length = 409
Score = 70.9 bits (166), Expect = 7e-13
Identities = 49/168 (29%), Positives = 79/168 (47%), Gaps = 2/168 (1%)
Frame = +3
Query: 141 TNVYVKNFGEDFSDEMLKDMFEKYGRITSHK-VMYKDDGNSRGFGFVAFEDPDAAERACI 317
TN+Y++ + +D++L++M KYG I S K +M K N +G+GFV FE P AA A
Sbjct: 107 TNLYIRGLMPNTNDDLLREMCSKYGNIASTKAIMDKATNNCKGYGFVDFESPQAAAAAVD 166
Query: 318 ELNGKELVEGKPLYVGRAQKKAERQKELKRKFEQLKSERLTRYQGVNLYVKNLDDTIDDE 497
LN EG + + Q++ + NLY+ NL ++
Sbjct: 167 GLN----TEGVQAQMAKLQQQEQ--------------------DPTNLYIANLPLDFTEQ 202
Query: 498 RLRKEFAPFGTITSAKVM-LEDGRSKGFGFVCFSSPEEATKAVTEMNG 638
L E FG + S +++ D +S+G GF S E+ ++ +NG
Sbjct: 203 MLETELNKFGMVISTRILRTPDNQSRGVGFARMDSKEKCEVIISALNG 250
Score = 48.0 bits (109), Expect = 6e-06
Identities = 24/68 (35%), Positives = 38/68 (55%), Gaps = 2/68 (2%)
Frame = +3
Query: 438 TRYQGVNLYVKNLDDTIDDERLRKEFAPFGTITSAKVMLEDGRS--KGFGFVCFSSPEEA 611
T NLY++ L +D+ LR+ + +G I S K +++ + KG+GFV F SP+ A
Sbjct: 102 TTPSSTNLYIRGLMPNTNDDLLREMCSKYGNIASTKAIMDKATNNCKGYGFVDFESPQAA 161
Query: 612 TKAVTEMN 635
AV +N
Sbjct: 162 AAAVDGLN 169
>Z50874-2|CAA90772.1| 357|Caenorhabditis elegans Hypothetical
protein R10E4.2a protein.
Length = 357
Score = 70.9 bits (166), Expect = 7e-13
Identities = 49/168 (29%), Positives = 79/168 (47%), Gaps = 2/168 (1%)
Frame = +3
Query: 141 TNVYVKNFGEDFSDEMLKDMFEKYGRITSHK-VMYKDDGNSRGFGFVAFEDPDAAERACI 317
TN+Y++ + +D++L++M KYG I S K +M K N +G+GFV FE P AA A
Sbjct: 81 TNLYIRGLMPNTNDDLLREMCSKYGNIASTKAIMDKATNNCKGYGFVDFESPQAAAAAVD 140
Query: 318 ELNGKELVEGKPLYVGRAQKKAERQKELKRKFEQLKSERLTRYQGVNLYVKNLDDTIDDE 497
LN EG + + Q++ + NLY+ NL ++
Sbjct: 141 GLN----TEGVQAQMAKLQQQEQ--------------------DPTNLYIANLPLDFTEQ 176
Query: 498 RLRKEFAPFGTITSAKVM-LEDGRSKGFGFVCFSSPEEATKAVTEMNG 638
L E FG + S +++ D +S+G GF S E+ ++ +NG
Sbjct: 177 MLETELNKFGMVISTRILRTPDNQSRGVGFARMDSKEKCEVIISALNG 224
Score = 48.4 bits (110), Expect = 4e-06
Identities = 24/68 (35%), Positives = 38/68 (55%), Gaps = 2/68 (2%)
Frame = +3
Query: 438 TRYQGVNLYVKNLDDTIDDERLRKEFAPFGTITSAKVMLEDGRS--KGFGFVCFSSPEEA 611
T NLY++ L +D+ LR+ + +G I S K +++ + KG+GFV F SP+ A
Sbjct: 76 TPLSSTNLYIRGLMPNTNDDLLREMCSKYGNIASTKAIMDKATNNCKGYGFVDFESPQAA 135
Query: 612 TKAVTEMN 635
AV +N
Sbjct: 136 AAAVDGLN 143
>Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical
protein C08B11.5 protein.
Length = 388
Score = 66.5 bits (155), Expect = 2e-11
Identities = 55/172 (31%), Positives = 86/172 (50%), Gaps = 5/172 (2%)
Frame = +3
Query: 147 VYVKNFGEDFSDEMLKDMFEKYGRITSHKVMYKD--DGNSRGFGFVAFEDPDAAERACIE 320
+YV E S+ +L ++ + G + S M KD N +GFGFV F + A+ A
Sbjct: 15 IYVGGLDEKVSESILWELMVQAGPVVSVN-MPKDRVTANHQGFGFVEFMGEEDADYAIKI 73
Query: 321 LNGKELVEGKPLYVGRAQKKAERQKELKRKFEQLKSERLTRYQGVNLYVKNLDDTIDDER 500
LN +L GKP+ V +A E+ ++ G N++V NLD +D++
Sbjct: 74 LNMIKLY-GKPIKVNKASAH-EKNMDV----------------GANIFVGNLDPEVDEKL 115
Query: 501 LRKEFAPFGTITSA-KVM--LEDGRSKGFGFVCFSSPEEATKAVTEMNGRIV 647
L F+ FG I K+M ++ G SKGF F+ F+S E + A+ MNG+ +
Sbjct: 116 LYDTFSAFGVILQVPKIMRDVDSGTSKGFAFINFASFEASDTALEAMNGQFL 167
Score = 46.8 bits (106), Expect = 1e-05
Identities = 33/111 (29%), Positives = 58/111 (52%), Gaps = 2/111 (1%)
Frame = +3
Query: 12 EEAANKSIEKVNGMLLNGKMVYVGRFIPRKEREKELGEKAKLFTNVYVKNFGEDFSDEML 191
EE A+ +I+ +N + L GK + V + E+ ++G N++V N + +++L
Sbjct: 64 EEDADYAIKILNMIKLYGKPIKVNK-ASAHEKNMDVG------ANIFVGNLDPEVDEKLL 116
Query: 192 KDMFEKYGRITS-HKVMYK-DDGNSRGFGFVAFEDPDAAERACIELNGKEL 338
D F +G I K+M D G S+GF F+ F +A++ A +NG+ L
Sbjct: 117 YDTFSAFGVILQVPKIMRDVDSGTSKGFAFINFASFEASDTALEAMNGQFL 167
Score = 32.7 bits (71), Expect = 0.23
Identities = 19/67 (28%), Positives = 31/67 (46%), Gaps = 2/67 (2%)
Frame = +3
Query: 441 RYQGVNLYVKNLDDTIDDERLRKEFAPFGTITSAKVMLE--DGRSKGFGFVCFSSPEEAT 614
R Q +YV LD+ + + L + G + S + + +GFGFV F E+A
Sbjct: 9 RNQDATIYVGGLDEKVSESILWELMVQAGPVVSVNMPKDRVTANHQGFGFVEFMGEEDAD 68
Query: 615 KAVTEMN 635
A+ +N
Sbjct: 69 YAIKILN 75
>U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA
binding protein protein.
Length = 398
Score = 66.5 bits (155), Expect = 2e-11
Identities = 55/172 (31%), Positives = 86/172 (50%), Gaps = 5/172 (2%)
Frame = +3
Query: 147 VYVKNFGEDFSDEMLKDMFEKYGRITSHKVMYKD--DGNSRGFGFVAFEDPDAAERACIE 320
+YV E S+ +L ++ + G + S M KD N +GFGFV F + A+ A
Sbjct: 25 IYVGGLDEKVSESILWELMVQAGPVVSVN-MPKDRVTANHQGFGFVEFMGEEDADYAIKI 83
Query: 321 LNGKELVEGKPLYVGRAQKKAERQKELKRKFEQLKSERLTRYQGVNLYVKNLDDTIDDER 500
LN +L GKP+ V +A E+ ++ G N++V NLD +D++
Sbjct: 84 LNMIKLY-GKPIKVNKASAH-EKNMDV----------------GANIFVGNLDPEVDEKL 125
Query: 501 LRKEFAPFGTITSA-KVM--LEDGRSKGFGFVCFSSPEEATKAVTEMNGRIV 647
L F+ FG I K+M ++ G SKGF F+ F+S E + A+ MNG+ +
Sbjct: 126 LYDTFSAFGVILQVPKIMRDVDSGTSKGFAFINFASFEASDTALEAMNGQFL 177
Score = 46.8 bits (106), Expect = 1e-05
Identities = 33/111 (29%), Positives = 58/111 (52%), Gaps = 2/111 (1%)
Frame = +3
Query: 12 EEAANKSIEKVNGMLLNGKMVYVGRFIPRKEREKELGEKAKLFTNVYVKNFGEDFSDEML 191
EE A+ +I+ +N + L GK + V + E+ ++G N++V N + +++L
Sbjct: 74 EEDADYAIKILNMIKLYGKPIKVNK-ASAHEKNMDVG------ANIFVGNLDPEVDEKLL 126
Query: 192 KDMFEKYGRITS-HKVMYK-DDGNSRGFGFVAFEDPDAAERACIELNGKEL 338
D F +G I K+M D G S+GF F+ F +A++ A +NG+ L
Sbjct: 127 YDTFSAFGVILQVPKIMRDVDSGTSKGFAFINFASFEASDTALEAMNGQFL 177
Score = 32.7 bits (71), Expect = 0.23
Identities = 19/67 (28%), Positives = 31/67 (46%), Gaps = 2/67 (2%)
Frame = +3
Query: 441 RYQGVNLYVKNLDDTIDDERLRKEFAPFGTITSAKVMLE--DGRSKGFGFVCFSSPEEAT 614
R Q +YV LD+ + + L + G + S + + +GFGFV F E+A
Sbjct: 19 RNQDATIYVGGLDEKVSESILWELMVQAGPVVSVNMPKDRVTANHQGFGFVEFMGEEDAD 78
Query: 615 KAVTEMN 635
A+ +N
Sbjct: 79 YAIKILN 85
>Z36752-6|CAA85327.1| 456|Caenorhabditis elegans Hypothetical
protein F35H8.5 protein.
Length = 456
Score = 64.9 bits (151), Expect = 5e-11
Identities = 48/171 (28%), Positives = 82/171 (47%), Gaps = 3/171 (1%)
Frame = +3
Query: 141 TNVYVKNFGEDFSDEMLKDMFEKYGRITSHKVMY-KDDGNSRGFGFVAFEDPDAAERACI 317
TN+ + + + E ++ +F G I S K++ K G S G+GFV + + A RA
Sbjct: 42 TNLIINYLPQGMTQEEVRSLFTSIGEIESCKLVRDKVTGQSLGYGFVNYVREEDALRAVS 101
Query: 318 ELNGKELVEGKPLYVGRAQKKAERQKELKRKFEQLKSERLTRYQGVNLYVKNLDDTIDDE 497
NG L + K +K + + ++++ +G NLYV + ++
Sbjct: 102 SFNGLRL----------------QNKTIKVSYARPSNDQI---KGSNLYVSGIPKSMTLH 142
Query: 498 RLRKEFAPFGTITSAKVMLED--GRSKGFGFVCFSSPEEATKAVTEMNGRI 644
L F PFG I +++++ ++ G SKG GFV F +EA A+ +NG I
Sbjct: 143 ELESIFRPFGQIITSRILSDNVTGLSKGVGFVRFDKKDEADVAIKTLNGSI 193
Score = 46.0 bits (104), Expect = 2e-05
Identities = 30/107 (28%), Positives = 53/107 (49%), Gaps = 1/107 (0%)
Frame = +3
Query: 12 EEAANKSIEKVNGMLLNGKMVYVGRFIPRKEREKELGEKAKLFTNVYVKNFGEDFSDEML 191
EE A +++ NG+ L K + V P ++ K +N+YV + + L
Sbjct: 93 EEDALRAVSSFNGLRLQNKTIKVSYARPSNDQIKG--------SNLYVSGIPKSMTLHEL 144
Query: 192 KDMFEKYGRITSHKVMYKD-DGNSRGFGFVAFEDPDAAERACIELNG 329
+ +F +G+I + +++ + G S+G GFV F+ D A+ A LNG
Sbjct: 145 ESIFRPFGQIITSRILSDNVTGLSKGVGFVRFDKKDEADVAIKTLNG 191
Score = 42.3 bits (95), Expect = 3e-04
Identities = 23/64 (35%), Positives = 35/64 (54%), Gaps = 1/64 (1%)
Frame = +3
Query: 450 GVNLYVKNLDDTIDDERLRKEFAPFGTITSAKVMLE-DGRSKGFGFVCFSSPEEATKAVT 626
G L+V NL DD L + F+ FG I + K++ + + KG+ FV S+ EA A+
Sbjct: 373 GYCLFVYNLSSDTDDTLLWQLFSQFGAIVNVKILRDLTQQCKGYAFVSMSNYTEAYNAML 432
Query: 627 EMNG 638
+NG
Sbjct: 433 SLNG 436
>D10877-1|BAA01645.1| 346|Caenorhabditis elegans hnRNP like protein
protein.
Length = 346
Score = 60.1 bits (139), Expect = 1e-09
Identities = 38/128 (29%), Positives = 63/128 (49%), Gaps = 1/128 (0%)
Frame = +3
Query: 54 LLNGKMVYVGRFIPRKEREKELGEKAKLFTNVYVKNFGEDFSDEMLKDMFEKYGRIT-SH 230
+++GK V R +PR ++ + E +YV ED +++ML + F KYG +T S
Sbjct: 87 IIDGKTVDPKRAVPRDDKNRS--ESNVSTKRLYVSGVREDHTEDMLTEYFTKYGTVTKSE 144
Query: 231 KVMYKDDGNSRGFGFVAFEDPDAAERACIELNGKELVEGKPLYVGRAQKKAERQKELKRK 410
++ K RGFGFV F+D D+ ++ C+ L +V G V + K E K +
Sbjct: 145 IILDKATQKPRGFGFVTFDDHDSVDQ-CV-LQKSHMVNGHRCDVRKGLSKDEMSKAQMNR 202
Query: 411 FEQLKSER 434
+ + R
Sbjct: 203 DRETRGGR 210
Score = 56.8 bits (131), Expect = 1e-08
Identities = 40/171 (23%), Positives = 81/171 (47%), Gaps = 3/171 (1%)
Frame = +3
Query: 147 VYVKNFGEDFSDEMLKDMFEKYGRITSHKVMYKDDGN-SRGFGFVAFEDPDAAERACIEL 323
++V + +D+++++ + ++G IT VM SRGFGFV F + A +
Sbjct: 25 IFVGGLTSNTTDDLMREFYSQFGEITDIIVMRDPTTKRSRGFGFVTFSGKTEVDAAMKQR 84
Query: 324 NGKELVEGKPLYVGRAQKKAERQKELKRKFEQLKSERLTRYQGVNLYVKNLDDTIDDERL 503
+++GK + K+A + + R + ++RL YV + + ++ L
Sbjct: 85 --PHIIDGKTV----DPKRAVPRDDKNRSESNVSTKRL--------YVSGVREDHTEDML 130
Query: 504 RKEFAPFGTITSAKVMLEDGRSK--GFGFVCFSSPEEATKAVTEMNGRIVG 650
+ F +GT+T ++++L+ K GFGFV F + + V + + + G
Sbjct: 131 TEYFTKYGTVTKSEIILDKATQKPRGFGFVTFDDHDSVDQCVLQKSHMVNG 181
>AF038613-8|AAL02515.2| 309|Caenorhabditis elegans Human hnrnp a1
homolog protein1, isoform b protein.
Length = 309
Score = 60.1 bits (139), Expect = 1e-09
Identities = 38/128 (29%), Positives = 63/128 (49%), Gaps = 1/128 (0%)
Frame = +3
Query: 54 LLNGKMVYVGRFIPRKEREKELGEKAKLFTNVYVKNFGEDFSDEMLKDMFEKYGRIT-SH 230
+++GK V R +PR ++ + E +YV ED +++ML + F KYG +T S
Sbjct: 49 IIDGKTVDPKRAVPRDDKNRS--ESNVSTKRLYVSGVREDHTEDMLTEYFTKYGTVTKSE 106
Query: 231 KVMYKDDGNSRGFGFVAFEDPDAAERACIELNGKELVEGKPLYVGRAQKKAERQKELKRK 410
++ K RGFGFV F+D D+ ++ C+ L +V G V + K E K +
Sbjct: 107 IILDKATQKPRGFGFVTFDDHDSVDQ-CV-LQKSHMVNGHRCDVRKGLSKDEMSKAQMNR 164
Query: 411 FEQLKSER 434
+ + R
Sbjct: 165 DRETRGGR 172
Score = 50.4 bits (115), Expect = 1e-06
Identities = 38/157 (24%), Positives = 73/157 (46%), Gaps = 3/157 (1%)
Frame = +3
Query: 189 LKDMFEKYGRITSHKVMYKDDGN-SRGFGFVAFEDPDAAERACIELNGKELVEGKPLYVG 365
+++ + ++G IT VM SRGFGFV F + A + +++GK +
Sbjct: 1 MREFYSQFGEITDIIVMRDPTTKRSRGFGFVTFSGKTEVDAAMKQR--PHIIDGKTV--- 55
Query: 366 RAQKKAERQKELKRKFEQLKSERLTRYQGVNLYVKNLDDTIDDERLRKEFAPFGTITSAK 545
K+A + + R + ++RL YV + + ++ L + F +GT+T ++
Sbjct: 56 -DPKRAVPRDDKNRSESNVSTKRL--------YVSGVREDHTEDMLTEYFTKYGTVTKSE 106
Query: 546 VMLEDGRSK--GFGFVCFSSPEEATKAVTEMNGRIVG 650
++L+ K GFGFV F + + V + + + G
Sbjct: 107 IILDKATQKPRGFGFVTFDDHDSVDQCVLQKSHMVNG 143
>AF038613-7|ABB51185.1| 308|Caenorhabditis elegans Human hnrnp a1
homolog protein1, isoform c protein.
Length = 308
Score = 60.1 bits (139), Expect = 1e-09
Identities = 38/128 (29%), Positives = 63/128 (49%), Gaps = 1/128 (0%)
Frame = +3
Query: 54 LLNGKMVYVGRFIPRKEREKELGEKAKLFTNVYVKNFGEDFSDEMLKDMFEKYGRIT-SH 230
+++GK V R +PR ++ + E +YV ED +++ML + F KYG +T S
Sbjct: 49 IIDGKTVDPKRAVPRDDKNRS--ESNVSTKRLYVSGVREDHTEDMLTEYFTKYGTVTKSE 106
Query: 231 KVMYKDDGNSRGFGFVAFEDPDAAERACIELNGKELVEGKPLYVGRAQKKAERQKELKRK 410
++ K RGFGFV F+D D+ ++ C+ L +V G V + K E K +
Sbjct: 107 IILDKATQKPRGFGFVTFDDHDSVDQ-CV-LQKSHMVNGHRCDVRKGLSKDEMSKAQMNR 164
Query: 411 FEQLKSER 434
+ + R
Sbjct: 165 DRETRGGR 172
Score = 50.4 bits (115), Expect = 1e-06
Identities = 38/157 (24%), Positives = 73/157 (46%), Gaps = 3/157 (1%)
Frame = +3
Query: 189 LKDMFEKYGRITSHKVMYKDDGN-SRGFGFVAFEDPDAAERACIELNGKELVEGKPLYVG 365
+++ + ++G IT VM SRGFGFV F + A + +++GK +
Sbjct: 1 MREFYSQFGEITDIIVMRDPTTKRSRGFGFVTFSGKTEVDAAMKQR--PHIIDGKTV--- 55
Query: 366 RAQKKAERQKELKRKFEQLKSERLTRYQGVNLYVKNLDDTIDDERLRKEFAPFGTITSAK 545
K+A + + R + ++RL YV + + ++ L + F +GT+T ++
Sbjct: 56 -DPKRAVPRDDKNRSESNVSTKRL--------YVSGVREDHTEDMLTEYFTKYGTVTKSE 106
Query: 546 VMLEDGRSK--GFGFVCFSSPEEATKAVTEMNGRIVG 650
++L+ K GFGFV F + + V + + + G
Sbjct: 107 IILDKATQKPRGFGFVTFDDHDSVDQCVLQKSHMVNG 143
>AF038613-6|ABB51186.1| 347|Caenorhabditis elegans Human hnrnp a1
homolog protein1, isoform d protein.
Length = 347
Score = 60.1 bits (139), Expect = 1e-09
Identities = 38/128 (29%), Positives = 63/128 (49%), Gaps = 1/128 (0%)
Frame = +3
Query: 54 LLNGKMVYVGRFIPRKEREKELGEKAKLFTNVYVKNFGEDFSDEMLKDMFEKYGRIT-SH 230
+++GK V R +PR ++ + E +YV ED +++ML + F KYG +T S
Sbjct: 87 IIDGKTVDPKRAVPRDDKNRS--ESNVSTKRLYVSGVREDHTEDMLTEYFTKYGTVTKSE 144
Query: 231 KVMYKDDGNSRGFGFVAFEDPDAAERACIELNGKELVEGKPLYVGRAQKKAERQKELKRK 410
++ K RGFGFV F+D D+ ++ C+ L +V G V + K E K +
Sbjct: 145 IILDKATQKPRGFGFVTFDDHDSVDQ-CV-LQKSHMVNGHRCDVRKGLSKDEMSKAQMNR 202
Query: 411 FEQLKSER 434
+ + R
Sbjct: 203 DRETRGGR 210
Score = 56.8 bits (131), Expect = 1e-08
Identities = 40/171 (23%), Positives = 81/171 (47%), Gaps = 3/171 (1%)
Frame = +3
Query: 147 VYVKNFGEDFSDEMLKDMFEKYGRITSHKVMYKDDGN-SRGFGFVAFEDPDAAERACIEL 323
++V + +D+++++ + ++G IT VM SRGFGFV F + A +
Sbjct: 25 IFVGGLTSNTTDDLMREFYSQFGEITDIIVMRDPTTKRSRGFGFVTFSGKTEVDAAMKQR 84
Query: 324 NGKELVEGKPLYVGRAQKKAERQKELKRKFEQLKSERLTRYQGVNLYVKNLDDTIDDERL 503
+++GK + K+A + + R + ++RL YV + + ++ L
Sbjct: 85 --PHIIDGKTV----DPKRAVPRDDKNRSESNVSTKRL--------YVSGVREDHTEDML 130
Query: 504 RKEFAPFGTITSAKVMLEDGRSK--GFGFVCFSSPEEATKAVTEMNGRIVG 650
+ F +GT+T ++++L+ K GFGFV F + + V + + + G
Sbjct: 131 TEYFTKYGTVTKSEIILDKATQKPRGFGFVTFDDHDSVDQCVLQKSHMVNG 181
>AF038613-5|AAB92051.1| 346|Caenorhabditis elegans Human hnrnp a1
homolog protein1, isoform a protein.
Length = 346
Score = 60.1 bits (139), Expect = 1e-09
Identities = 38/128 (29%), Positives = 63/128 (49%), Gaps = 1/128 (0%)
Frame = +3
Query: 54 LLNGKMVYVGRFIPRKEREKELGEKAKLFTNVYVKNFGEDFSDEMLKDMFEKYGRIT-SH 230
+++GK V R +PR ++ + E +YV ED +++ML + F KYG +T S
Sbjct: 87 IIDGKTVDPKRAVPRDDKNRS--ESNVSTKRLYVSGVREDHTEDMLTEYFTKYGTVTKSE 144
Query: 231 KVMYKDDGNSRGFGFVAFEDPDAAERACIELNGKELVEGKPLYVGRAQKKAERQKELKRK 410
++ K RGFGFV F+D D+ ++ C+ L +V G V + K E K +
Sbjct: 145 IILDKATQKPRGFGFVTFDDHDSVDQ-CV-LQKSHMVNGHRCDVRKGLSKDEMSKAQMNR 202
Query: 411 FEQLKSER 434
+ + R
Sbjct: 203 DRETRGGR 210
Score = 56.8 bits (131), Expect = 1e-08
Identities = 40/171 (23%), Positives = 81/171 (47%), Gaps = 3/171 (1%)
Frame = +3
Query: 147 VYVKNFGEDFSDEMLKDMFEKYGRITSHKVMYKDDGN-SRGFGFVAFEDPDAAERACIEL 323
++V + +D+++++ + ++G IT VM SRGFGFV F + A +
Sbjct: 25 IFVGGLTSNTTDDLMREFYSQFGEITDIIVMRDPTTKRSRGFGFVTFSGKTEVDAAMKQR 84
Query: 324 NGKELVEGKPLYVGRAQKKAERQKELKRKFEQLKSERLTRYQGVNLYVKNLDDTIDDERL 503
+++GK + K+A + + R + ++RL YV + + ++ L
Sbjct: 85 --PHIIDGKTV----DPKRAVPRDDKNRSESNVSTKRL--------YVSGVREDHTEDML 130
Query: 504 RKEFAPFGTITSAKVMLEDGRSK--GFGFVCFSSPEEATKAVTEMNGRIVG 650
+ F +GT+T ++++L+ K GFGFV F + + V + + + G
Sbjct: 131 TEYFTKYGTVTKSEIILDKATQKPRGFGFVTFDDHDSVDQCVLQKSHMVNG 181
>U41531-7|AAA83161.2| 415|Caenorhabditis elegans Feminizing gene on
x protein 1 protein.
Length = 415
Score = 59.7 bits (138), Expect = 2e-09
Identities = 32/83 (38%), Positives = 50/83 (60%)
Frame = +3
Query: 147 VYVKNFGEDFSDEMLKDMFEKYGRITSHKVMYKDDGNSRGFGFVAFEDPDAAERACIELN 326
++V N F D LK MFEK+G ++ ++++ + G S+GFGFV E P AERA EL+
Sbjct: 155 LHVSNIPFRFRDPDLKTMFEKFGVVSDVEIIFNERG-SKGFGFVTMERPQDAERARQELH 213
Query: 327 GKELVEGKPLYVGRAQKKAERQK 395
G ++EG+ + V A + +K
Sbjct: 214 G-SMIEGRKIEVNCATARVHSKK 235
Score = 47.6 bits (108), Expect = 8e-06
Identities = 20/63 (31%), Positives = 36/63 (57%)
Frame = +3
Query: 459 LYVKNLDDTIDDERLRKEFAPFGTITSAKVMLEDGRSKGFGFVCFSSPEEATKAVTEMNG 638
L+V N+ D L+ F FG ++ +++ + SKGFGFV P++A +A E++G
Sbjct: 155 LHVSNIPFRFRDPDLKTMFEKFGVVSDVEIIFNERGSKGFGFVTMERPQDAERARQELHG 214
Query: 639 RIV 647
++
Sbjct: 215 SMI 217
>U14946-1|AAA67723.1| 415|Caenorhabditis elegans ribonucleoprotein
protein.
Length = 415
Score = 59.7 bits (138), Expect = 2e-09
Identities = 32/83 (38%), Positives = 50/83 (60%)
Frame = +3
Query: 147 VYVKNFGEDFSDEMLKDMFEKYGRITSHKVMYKDDGNSRGFGFVAFEDPDAAERACIELN 326
++V N F D LK MFEK+G ++ ++++ + G S+GFGFV E P AERA EL+
Sbjct: 155 LHVSNIPFRFRDPDLKTMFEKFGVVSDVEIIFNERG-SKGFGFVTMERPQDAERARQELH 213
Query: 327 GKELVEGKPLYVGRAQKKAERQK 395
G ++EG+ + V A + +K
Sbjct: 214 G-SMIEGRKIEVNCATARVHSKK 235
Score = 47.6 bits (108), Expect = 8e-06
Identities = 20/63 (31%), Positives = 36/63 (57%)
Frame = +3
Query: 459 LYVKNLDDTIDDERLRKEFAPFGTITSAKVMLEDGRSKGFGFVCFSSPEEATKAVTEMNG 638
L+V N+ D L+ F FG ++ +++ + SKGFGFV P++A +A E++G
Sbjct: 155 LHVSNIPFRFRDPDLKTMFEKFGVVSDVEIIFNERGSKGFGFVTMERPQDAERARQELHG 214
Query: 639 RIV 647
++
Sbjct: 215 SMI 217
>Z83127-4|CAB05631.1| 872|Caenorhabditis elegans Hypothetical protein
T23F6.4 protein.
Length = 872
Score = 56.4 bits (130), Expect = 2e-08
Identities = 54/186 (29%), Positives = 88/186 (47%), Gaps = 11/186 (5%)
Frame = +3
Query: 96 RKEREKELGEKAKLFTNVYVKNFGEDFSDEMLKDMFEK-YGRITSHKVMYKDDGN----- 257
+K+ EKE+ + LF VKN D +D L+ +F K YG + + K
Sbjct: 630 KKQSEKEIESGSTLF----VKNLAFDTTDGSLEFLFRKRYGDLVKSAQISKKLNPAEPTK 685
Query: 258 --SRGFGFVAFEDPDAAERACIELNGKELVEGKPLYVGRAQKKAERQKELKRKFEQLKSE 431
S GFGFV F A+ A ++ G EL++G L + + ++ + LKRK + K +
Sbjct: 686 PLSMGFGFVQFYTAFDAKTALKDMQG-ELLDGHSLELKISHRENADKGALKRKEVKQKEQ 744
Query: 432 RLTRYQGVNLYVKNLDDTIDDERLRKEFAPFGTITSAKVMLEDGRS---KGFGFVCFSSP 602
+ L V+NL + + F FG + + ++ + G+ +GFGFV F S
Sbjct: 745 G----ECTKLLVRNLPFEASVKEVETLFETFGAVKTIRIPKKPGQKQQHRGFGFVDFISA 800
Query: 603 EEATKA 620
+EA +A
Sbjct: 801 DEAHRA 806
Score = 50.4 bits (115), Expect = 1e-06
Identities = 23/62 (37%), Positives = 34/62 (54%)
Frame = +3
Query: 141 TNVYVKNFGEDFSDEMLKDMFEKYGRITSHKVMYKDDGNSRGFGFVAFEDPDAAERACIE 320
T + VKN +++ L+ FEKYG+I+ + Y +G RGF FV F D +A A +
Sbjct: 3 TRLIVKNLPSTCTEQQLRKFFEKYGQISDASLKYTKEGKFRGFAFVGFLDEGSASNALAK 62
Query: 321 LN 326
N
Sbjct: 63 SN 64
Score = 42.7 bits (96), Expect = 2e-04
Identities = 22/60 (36%), Positives = 35/60 (58%), Gaps = 1/60 (1%)
Frame = +3
Query: 459 LYVKNLDDTIDDERLRKEFAPFGTITSAKV-MLEDGRSKGFGFVCFSSPEEATKAVTEMN 635
L VKNL T +++LRK F +G I+ A + ++G+ +GF FV F A+ A+ + N
Sbjct: 5 LIVKNLPSTCTEQQLRKFFEKYGQISDASLKYTKEGKFRGFAFVGFLDEGSASNALAKSN 64
Score = 41.5 bits (93), Expect = 5e-04
Identities = 26/102 (25%), Positives = 54/102 (52%), Gaps = 1/102 (0%)
Frame = +3
Query: 96 RKEREKELGEKAKLFTNVYVKNFGEDFSDEMLKDMFEKYGRITSHKVMY-KDDGNSRGFG 272
R + E+ + EK ++++N ++ L+ +F+KYG ++ +V+ K G +GF
Sbjct: 264 RDKEEETVREKILETGRLFLRNLPYATKEDDLQFLFKKYGEVSEVQVVIDKKTGACKGFA 323
Query: 273 FVAFEDPDAAERACIELNGKELVEGKPLYVGRAQKKAERQKE 398
V F P+AA A L+G + +G+ +++ +K ++ E
Sbjct: 324 IVEFVFPEAAVAAYSALDG-YVFKGRMMHILPGDEKRTKEGE 364
Score = 35.1 bits (77), Expect = 0.044
Identities = 18/64 (28%), Positives = 35/64 (54%), Gaps = 2/64 (3%)
Frame = +3
Query: 459 LYVKNLDDTIDDERLRKEFAPFGTITSAKVMLE--DGRSKGFGFVCFSSPEEATKAVTEM 632
L+++NL ++ L+ F +G ++ +V+++ G KGF V F PE A A + +
Sbjct: 281 LFLRNLPYATKEDDLQFLFKKYGEVSEVQVVIDKKTGACKGFAIVEFVFPEAAVAAYSAL 340
Query: 633 NGRI 644
+G +
Sbjct: 341 DGYV 344
>U80455-2|AAB37882.2| 420|Caenorhabditis elegans Elav-type rna
binding protein familyprotein 1, isoform b protein.
Length = 420
Score = 56.0 bits (129), Expect = 2e-08
Identities = 29/69 (42%), Positives = 40/69 (57%), Gaps = 2/69 (2%)
Frame = +3
Query: 450 GVNLYVKNLDDTIDDERLRKEFAPFGTITSAKVMLE--DGRSKGFGFVCFSSPEEATKAV 623
G NL++ +L D L FAPFG I SAKV ++ SK FGFV + + + AT A+
Sbjct: 334 GANLFIYHLPQDFGDSDLINTFAPFGGILSAKVFIDKVTNLSKCFGFVSYENAQSATNAI 393
Query: 624 TEMNGRIVG 650
+ MNG +G
Sbjct: 394 SAMNGFQIG 402
Score = 41.5 bits (93), Expect = 5e-04
Identities = 22/66 (33%), Positives = 37/66 (56%), Gaps = 1/66 (1%)
Frame = +3
Query: 144 NVYVKNFGEDFSDEMLKDMFEKYGRITSHKVMYKDDGN-SRGFGFVAFEDPDAAERACIE 320
N+++ + +DF D L + F +G I S KV N S+ FGFV++E+ +A A
Sbjct: 336 NLFIYHLPQDFGDSDLINTFAPFGGILSAKVFIDKVTNLSKCFGFVSYENAQSATNAISA 395
Query: 321 LNGKEL 338
+NG ++
Sbjct: 396 MNGFQI 401
>U80455-1|AAB37881.1| 584|Caenorhabditis elegans Elav-type rna
binding protein familyprotein 1, isoform a protein.
Length = 584
Score = 56.0 bits (129), Expect = 2e-08
Identities = 29/69 (42%), Positives = 40/69 (57%), Gaps = 2/69 (2%)
Frame = +3
Query: 450 GVNLYVKNLDDTIDDERLRKEFAPFGTITSAKVMLE--DGRSKGFGFVCFSSPEEATKAV 623
G NL++ +L D L FAPFG I SAKV ++ SK FGFV + + + AT A+
Sbjct: 498 GANLFIYHLPQDFGDSDLINTFAPFGGILSAKVFIDKVTNLSKCFGFVSYENAQSATNAI 557
Query: 624 TEMNGRIVG 650
+ MNG +G
Sbjct: 558 SAMNGFQIG 566
Score = 47.2 bits (107), Expect = 1e-05
Identities = 44/165 (26%), Positives = 76/165 (46%), Gaps = 2/165 (1%)
Frame = +3
Query: 147 VYVKNFGEDFSDEMLKDMFEKYGRITSHKVMY-KDDGNSRGFGFVAFEDPDAAERACIEL 323
++V +++ + +FEKYG + S ++ K S+G FV F A A L
Sbjct: 57 MFVGQIPRQWNETDCRRLFEKYGSVFSCNILRDKSTQASKGCCFVTFYHRKDAIEAQGAL 116
Query: 324 NGKELVEGKPLYVGRAQKKAERQKELKRKFEQLKSERLTRYQGVNLYVKNLDDTIDDERL 503
+ +++EG ++ K A+ + +RK L++ L ++E L
Sbjct: 117 HNIKVIEG--MHHPVQMKPADTENRNERK----------------LFIGQLSKKHNEENL 158
Query: 504 RKEFAPFGTITSAKVMLE-DGRSKGFGFVCFSSPEEATKAVTEMN 635
R+ FA FG I V+ + DG+S+G FV F++ A A EM+
Sbjct: 159 REIFAKFGHIEDCSVLRDQDGKSRGCAFVTFTNRSCAVVATKEMH 203
Score = 46.4 bits (105), Expect = 2e-05
Identities = 27/90 (30%), Positives = 47/90 (52%), Gaps = 2/90 (2%)
Frame = +3
Query: 147 VYVKNFGEDFSDEMLKDMFEKYGRITSHKVMYKDDGNSRGFGFVAFEDPDAAERACIELN 326
+++ + ++E L+++F K+G I V+ DG SRG FV F + A A E++
Sbjct: 144 LFIGQLSKKHNEENLREIFAKFGHIEDCSVLRDQDGKSRGCAFVTFTNRSCAVVATKEMH 203
Query: 327 GKELVEG--KPLYVGRAQKKAERQKELKRK 410
+ +EG PL V A ++ K++K K
Sbjct: 204 HSQTMEGCSAPLVVKFAD--TQKDKDVKTK 231
Score = 41.5 bits (93), Expect = 5e-04
Identities = 22/66 (33%), Positives = 37/66 (56%), Gaps = 1/66 (1%)
Frame = +3
Query: 144 NVYVKNFGEDFSDEMLKDMFEKYGRITSHKVMYKDDGN-SRGFGFVAFEDPDAAERACIE 320
N+++ + +DF D L + F +G I S KV N S+ FGFV++E+ +A A
Sbjct: 500 NLFIYHLPQDFGDSDLINTFAPFGGILSAKVFIDKVTNLSKCFGFVSYENAQSATNAISA 559
Query: 321 LNGKEL 338
+NG ++
Sbjct: 560 MNGFQI 565
>U53931-1|AAA98566.1| 584|Caenorhabditis elegans elav-type
ribonucleoprotein protein.
Length = 584
Score = 56.0 bits (129), Expect = 2e-08
Identities = 29/69 (42%), Positives = 40/69 (57%), Gaps = 2/69 (2%)
Frame = +3
Query: 450 GVNLYVKNLDDTIDDERLRKEFAPFGTITSAKVMLE--DGRSKGFGFVCFSSPEEATKAV 623
G NL++ +L D L FAPFG I SAKV ++ SK FGFV + + + AT A+
Sbjct: 498 GANLFIYHLPQDFGDSDLINTFAPFGGILSAKVFIDKVTNLSKCFGFVSYENAQSATNAI 557
Query: 624 TEMNGRIVG 650
+ MNG +G
Sbjct: 558 SAMNGFQIG 566
Score = 47.2 bits (107), Expect = 1e-05
Identities = 44/165 (26%), Positives = 76/165 (46%), Gaps = 2/165 (1%)
Frame = +3
Query: 147 VYVKNFGEDFSDEMLKDMFEKYGRITSHKVMY-KDDGNSRGFGFVAFEDPDAAERACIEL 323
++V +++ + +FEKYG + S ++ K S+G FV F A A L
Sbjct: 57 MFVGQIPRQWNETDCRRLFEKYGSVFSCNILRDKSTQASKGCCFVTFYHRKDAIEAQGAL 116
Query: 324 NGKELVEGKPLYVGRAQKKAERQKELKRKFEQLKSERLTRYQGVNLYVKNLDDTIDDERL 503
+ +++EG ++ K A+ + +RK L++ L ++E L
Sbjct: 117 HNIKVIEG--MHHPVQMKPADTENRNERK----------------LFIGQLSKKHNEENL 158
Query: 504 RKEFAPFGTITSAKVMLE-DGRSKGFGFVCFSSPEEATKAVTEMN 635
R+ FA FG I V+ + DG+S+G FV F++ A A EM+
Sbjct: 159 REIFAKFGHIEDCSVLRDQDGKSRGCAFVTFTNRSCAVVATKEMH 203
Score = 46.4 bits (105), Expect = 2e-05
Identities = 27/90 (30%), Positives = 47/90 (52%), Gaps = 2/90 (2%)
Frame = +3
Query: 147 VYVKNFGEDFSDEMLKDMFEKYGRITSHKVMYKDDGNSRGFGFVAFEDPDAAERACIELN 326
+++ + ++E L+++F K+G I V+ DG SRG FV F + A A E++
Sbjct: 144 LFIGQLSKKHNEENLREIFAKFGHIEDCSVLRDQDGKSRGCAFVTFTNRSCAVVATKEMH 203
Query: 327 GKELVEG--KPLYVGRAQKKAERQKELKRK 410
+ +EG PL V A ++ K++K K
Sbjct: 204 HSQTMEGCSAPLVVKFAD--TQKDKDVKTK 231
Score = 41.5 bits (93), Expect = 5e-04
Identities = 22/66 (33%), Positives = 37/66 (56%), Gaps = 1/66 (1%)
Frame = +3
Query: 144 NVYVKNFGEDFSDEMLKDMFEKYGRITSHKVMYKDDGN-SRGFGFVAFEDPDAAERACIE 320
N+++ + +DF D L + F +G I S KV N S+ FGFV++E+ +A A
Sbjct: 500 NLFIYHLPQDFGDSDLINTFAPFGGILSAKVFIDKVTNLSKCFGFVSYENAQSATNAISA 559
Query: 321 LNGKEL 338
+NG ++
Sbjct: 560 MNGFQI 565
>EF523770-1|ABS18836.1| 513|Caenorhabditis elegans ELAV-type RNA
binding protein variantE protein.
Length = 513
Score = 56.0 bits (129), Expect = 2e-08
Identities = 29/69 (42%), Positives = 40/69 (57%), Gaps = 2/69 (2%)
Frame = +3
Query: 450 GVNLYVKNLDDTIDDERLRKEFAPFGTITSAKVMLE--DGRSKGFGFVCFSSPEEATKAV 623
G NL++ +L D L FAPFG I SAKV ++ SK FGFV + + + AT A+
Sbjct: 427 GANLFIYHLPQDFGDSDLINTFAPFGGILSAKVFIDKVTNLSKCFGFVSYENAQSATNAI 486
Query: 624 TEMNGRIVG 650
+ MNG +G
Sbjct: 487 SAMNGFQIG 495
Score = 47.2 bits (107), Expect = 1e-05
Identities = 44/165 (26%), Positives = 76/165 (46%), Gaps = 2/165 (1%)
Frame = +3
Query: 147 VYVKNFGEDFSDEMLKDMFEKYGRITSHKVMY-KDDGNSRGFGFVAFEDPDAAERACIEL 323
++V +++ + +FEKYG + S ++ K S+G FV F A A L
Sbjct: 57 MFVGQIPRQWNETDCRRLFEKYGSVFSCNILRDKSTQASKGCCFVTFYHRKDAIEAQGAL 116
Query: 324 NGKELVEGKPLYVGRAQKKAERQKELKRKFEQLKSERLTRYQGVNLYVKNLDDTIDDERL 503
+ +++EG ++ K A+ + +RK L++ L ++E L
Sbjct: 117 HNIKVIEG--MHHPVQMKPADTENRNERK----------------LFIGQLSKKHNEENL 158
Query: 504 RKEFAPFGTITSAKVMLE-DGRSKGFGFVCFSSPEEATKAVTEMN 635
R+ FA FG I V+ + DG+S+G FV F++ A A EM+
Sbjct: 159 REIFAKFGHIEDCSVLRDQDGKSRGCAFVTFTNRSCAVVATKEMH 203
Score = 46.4 bits (105), Expect = 2e-05
Identities = 27/90 (30%), Positives = 47/90 (52%), Gaps = 2/90 (2%)
Frame = +3
Query: 147 VYVKNFGEDFSDEMLKDMFEKYGRITSHKVMYKDDGNSRGFGFVAFEDPDAAERACIELN 326
+++ + ++E L+++F K+G I V+ DG SRG FV F + A A E++
Sbjct: 144 LFIGQLSKKHNEENLREIFAKFGHIEDCSVLRDQDGKSRGCAFVTFTNRSCAVVATKEMH 203
Query: 327 GKELVEG--KPLYVGRAQKKAERQKELKRK 410
+ +EG PL V A ++ K++K K
Sbjct: 204 HSQTMEGCSAPLVVKFAD--TQKDKDVKTK 231
Score = 41.5 bits (93), Expect = 5e-04
Identities = 22/66 (33%), Positives = 37/66 (56%), Gaps = 1/66 (1%)
Frame = +3
Query: 144 NVYVKNFGEDFSDEMLKDMFEKYGRITSHKVMYKDDGN-SRGFGFVAFEDPDAAERACIE 320
N+++ + +DF D L + F +G I S KV N S+ FGFV++E+ +A A
Sbjct: 429 NLFIYHLPQDFGDSDLINTFAPFGGILSAKVFIDKVTNLSKCFGFVSYENAQSATNAISA 488
Query: 321 LNGKEL 338
+NG ++
Sbjct: 489 MNGFQI 494
>EF523766-1|ABS18832.1| 584|Caenorhabditis elegans ELAV-type RNA
binding protein variantA protein.
Length = 584
Score = 56.0 bits (129), Expect = 2e-08
Identities = 29/69 (42%), Positives = 40/69 (57%), Gaps = 2/69 (2%)
Frame = +3
Query: 450 GVNLYVKNLDDTIDDERLRKEFAPFGTITSAKVMLE--DGRSKGFGFVCFSSPEEATKAV 623
G NL++ +L D L FAPFG I SAKV ++ SK FGFV + + + AT A+
Sbjct: 498 GANLFIYHLPQDFGDSDLINTFAPFGGILSAKVFIDKVTNLSKCFGFVSYENAQSATNAI 557
Query: 624 TEMNGRIVG 650
+ MNG +G
Sbjct: 558 SAMNGFQIG 566
Score = 47.2 bits (107), Expect = 1e-05
Identities = 44/165 (26%), Positives = 76/165 (46%), Gaps = 2/165 (1%)
Frame = +3
Query: 147 VYVKNFGEDFSDEMLKDMFEKYGRITSHKVMY-KDDGNSRGFGFVAFEDPDAAERACIEL 323
++V +++ + +FEKYG + S ++ K S+G FV F A A L
Sbjct: 57 MFVGQIPRQWNETDCRRLFEKYGSVFSCNILRDKSTQASKGCCFVTFYHRKDAIEAQGAL 116
Query: 324 NGKELVEGKPLYVGRAQKKAERQKELKRKFEQLKSERLTRYQGVNLYVKNLDDTIDDERL 503
+ +++EG ++ K A+ + +RK L++ L ++E L
Sbjct: 117 HNIKVIEG--MHHPVQMKPADTENRNERK----------------LFIGQLSKKHNEENL 158
Query: 504 RKEFAPFGTITSAKVMLE-DGRSKGFGFVCFSSPEEATKAVTEMN 635
R+ FA FG I V+ + DG+S+G FV F++ A A EM+
Sbjct: 159 REIFAKFGHIEDCSVLRDQDGKSRGCAFVTFTNRSCAVVATKEMH 203
Score = 46.4 bits (105), Expect = 2e-05
Identities = 27/90 (30%), Positives = 47/90 (52%), Gaps = 2/90 (2%)
Frame = +3
Query: 147 VYVKNFGEDFSDEMLKDMFEKYGRITSHKVMYKDDGNSRGFGFVAFEDPDAAERACIELN 326
+++ + ++E L+++F K+G I V+ DG SRG FV F + A A E++
Sbjct: 144 LFIGQLSKKHNEENLREIFAKFGHIEDCSVLRDQDGKSRGCAFVTFTNRSCAVVATKEMH 203
Query: 327 GKELVEG--KPLYVGRAQKKAERQKELKRK 410
+ +EG PL V A ++ K++K K
Sbjct: 204 HSQTMEGCSAPLVVKFAD--TQKDKDVKTK 231
Score = 41.5 bits (93), Expect = 5e-04
Identities = 22/66 (33%), Positives = 37/66 (56%), Gaps = 1/66 (1%)
Frame = +3
Query: 144 NVYVKNFGEDFSDEMLKDMFEKYGRITSHKVMYKDDGN-SRGFGFVAFEDPDAAERACIE 320
N+++ + +DF D L + F +G I S KV N S+ FGFV++E+ +A A
Sbjct: 500 NLFIYHLPQDFGDSDLINTFAPFGGILSAKVFIDKVTNLSKCFGFVSYENAQSATNAISA 559
Query: 321 LNGKEL 338
+NG ++
Sbjct: 560 MNGFQI 565
>AC024791-23|AAM81102.1| 346|Caenorhabditis elegans Rnp (rrm rna
binding domain) containingprotein 6, isoform c protein.
Length = 346
Score = 55.6 bits (128), Expect = 3e-08
Identities = 40/183 (21%), Positives = 89/183 (48%), Gaps = 4/183 (2%)
Frame = +3
Query: 99 KEREKELGEKAKLFTNVYVKNFGEDFSDEMLKDMFEKYGRITSHKVMYKD-DGNSRGFGF 275
++R++ + + + +YV + + ++ML+ F+ +G I S + + G+ + F F
Sbjct: 88 QQRQQMYSQALSIMSRIYVGSISFEIREDMLRRAFDPFGPIKSINMSWDPATGHHKTFAF 147
Query: 276 VAFEDPDAAERACIELNGKELVEGKPLYVGRAQKKAER-QKELKRKFEQLKSERLTRYQG 452
V +E P+AA A +NG +++ G+ L V + R + + + + + +
Sbjct: 148 VEYEVPEAALLAQESMNG-QMLGGRNLKVNSMMFQEMRLPQNMPQAQPIIDMVQKDAKKY 206
Query: 453 VNLYVKNLDDTIDDERLRKEFAPFGTITSAKV-MLEDGRS-KGFGFVCFSSPEEATKAVT 626
+YV ++ + + L+ F FG I ++ GR +GFG++ F++ ++A+
Sbjct: 207 FRVYVSSVHPDLSETDLKSVFEAFGEIVKCQLARAPTGRGHRGFGYLEFNNLTSQSEAIA 266
Query: 627 EMN 635
MN
Sbjct: 267 GMN 269
Score = 47.6 bits (108), Expect = 8e-06
Identities = 28/93 (30%), Positives = 51/93 (54%), Gaps = 2/93 (2%)
Frame = +3
Query: 378 KAERQKELKRKFEQLKSERLTRYQGVNLYVKNLDDTIDDERLRKEFAPFGTITSAKVMLE 557
+ ++Q++ ++ +Q+ S+ L+ +YV ++ I ++ LR+ F PFG I S + +
Sbjct: 79 RQQKQQQENQQRQQMYSQALSIMS--RIYVGSISFEIREDMLRRAFDPFGPIKSINMSWD 136
Query: 558 D--GRSKGFGFVCFSSPEEATKAVTEMNGRIVG 650
G K F FV + PE A A MNG+++G
Sbjct: 137 PATGHHKTFAFVEYEVPEAALLAQESMNGQMLG 169
Score = 42.3 bits (95), Expect = 3e-04
Identities = 32/119 (26%), Positives = 57/119 (47%), Gaps = 12/119 (10%)
Frame = +3
Query: 6 KLEEAANKSIEKVNGMLLNGKMVYVGRFI----------PRKEREKELGEK-AKLFTNVY 152
++ EAA + E +NG +L G+ + V + P+ + ++ +K AK + VY
Sbjct: 151 EVPEAALLAQESMNGQMLGGRNLKVNSMMFQEMRLPQNMPQAQPIIDMVQKDAKKYFRVY 210
Query: 153 VKNFGEDFSDEMLKDMFEKYGRITSHKVMYKDDGNS-RGFGFVAFEDPDAAERACIELN 326
V + D S+ LK +FE +G I ++ G RGFG++ F + + A +N
Sbjct: 211 VSSVHPDLSETDLKSVFEAFGEIVKCQLARAPTGRGHRGFGYLEFNNLTSQSEAIAGMN 269
>AC024791-22|AAF60676.1| 339|Caenorhabditis elegans Rnp (rrm rna
binding domain) containingprotein 6, isoform a protein.
Length = 339
Score = 55.6 bits (128), Expect = 3e-08
Identities = 40/183 (21%), Positives = 89/183 (48%), Gaps = 4/183 (2%)
Frame = +3
Query: 99 KEREKELGEKAKLFTNVYVKNFGEDFSDEMLKDMFEKYGRITSHKVMYKD-DGNSRGFGF 275
++R++ + + + +YV + + ++ML+ F+ +G I S + + G+ + F F
Sbjct: 88 QQRQQMYSQALSIMSRIYVGSISFEIREDMLRRAFDPFGPIKSINMSWDPATGHHKTFAF 147
Query: 276 VAFEDPDAAERACIELNGKELVEGKPLYVGRAQKKAER-QKELKRKFEQLKSERLTRYQG 452
V +E P+AA A +NG +++ G+ L V + R + + + + + +
Sbjct: 148 VEYEVPEAALLAQESMNG-QMLGGRNLKVNSMMFQEMRLPQNMPQAQPIIDMVQKDAKKY 206
Query: 453 VNLYVKNLDDTIDDERLRKEFAPFGTITSAKV-MLEDGRS-KGFGFVCFSSPEEATKAVT 626
+YV ++ + + L+ F FG I ++ GR +GFG++ F++ ++A+
Sbjct: 207 FRVYVSSVHPDLSETDLKSVFEAFGEIVKCQLARAPTGRGHRGFGYLEFNNLTSQSEAIA 266
Query: 627 EMN 635
MN
Sbjct: 267 GMN 269
Score = 47.6 bits (108), Expect = 8e-06
Identities = 28/93 (30%), Positives = 51/93 (54%), Gaps = 2/93 (2%)
Frame = +3
Query: 378 KAERQKELKRKFEQLKSERLTRYQGVNLYVKNLDDTIDDERLRKEFAPFGTITSAKVMLE 557
+ ++Q++ ++ +Q+ S+ L+ +YV ++ I ++ LR+ F PFG I S + +
Sbjct: 79 RQQKQQQENQQRQQMYSQALSIMS--RIYVGSISFEIREDMLRRAFDPFGPIKSINMSWD 136
Query: 558 D--GRSKGFGFVCFSSPEEATKAVTEMNGRIVG 650
G K F FV + PE A A MNG+++G
Sbjct: 137 PATGHHKTFAFVEYEVPEAALLAQESMNGQMLG 169
Score = 44.4 bits (100), Expect = 7e-05
Identities = 37/133 (27%), Positives = 65/133 (48%), Gaps = 12/133 (9%)
Frame = +3
Query: 6 KLEEAANKSIEKVNGMLLNGKMVYVGRFI----------PRKEREKELGEK-AKLFTNVY 152
++ EAA + E +NG +L G+ + V + P+ + ++ +K AK + VY
Sbjct: 151 EVPEAALLAQESMNGQMLGGRNLKVNSMMFQEMRLPQNMPQAQPIIDMVQKDAKKYFRVY 210
Query: 153 VKNFGEDFSDEMLKDMFEKYGRITSHKVMYKDDGNS-RGFGFVAFEDPDAAERACIELNG 329
V + D S+ LK +FE +G I ++ G RGFG++ F + + A +N
Sbjct: 211 VSSVHPDLSETDLKSVFEAFGEIVKCQLARAPTGRGHRGFGYLEFNNLTSQSEAIAGMNM 270
Query: 330 KELVEGKPLYVGR 368
+L G+ L VG+
Sbjct: 271 FDL-GGQYLRVGK 282
>AC024791-21|AAF60666.1| 749|Caenorhabditis elegans Rnp (rrm rna
binding domain) containingprotein 6, isoform b protein.
Length = 749
Score = 55.6 bits (128), Expect = 3e-08
Identities = 40/183 (21%), Positives = 89/183 (48%), Gaps = 4/183 (2%)
Frame = +3
Query: 99 KEREKELGEKAKLFTNVYVKNFGEDFSDEMLKDMFEKYGRITSHKVMYKD-DGNSRGFGF 275
++R++ + + + +YV + + ++ML+ F+ +G I S + + G+ + F F
Sbjct: 88 QQRQQMYSQALSIMSRIYVGSISFEIREDMLRRAFDPFGPIKSINMSWDPATGHHKTFAF 147
Query: 276 VAFEDPDAAERACIELNGKELVEGKPLYVGRAQKKAER-QKELKRKFEQLKSERLTRYQG 452
V +E P+AA A +NG +++ G+ L V + R + + + + + +
Sbjct: 148 VEYEVPEAALLAQESMNG-QMLGGRNLKVNSMMFQEMRLPQNMPQAQPIIDMVQKDAKKY 206
Query: 453 VNLYVKNLDDTIDDERLRKEFAPFGTITSAKV-MLEDGRS-KGFGFVCFSSPEEATKAVT 626
+YV ++ + + L+ F FG I ++ GR +GFG++ F++ ++A+
Sbjct: 207 FRVYVSSVHPDLSETDLKSVFEAFGEIVKCQLARAPTGRGHRGFGYLEFNNLTSQSEAIA 266
Query: 627 EMN 635
MN
Sbjct: 267 GMN 269
Score = 47.6 bits (108), Expect = 8e-06
Identities = 28/93 (30%), Positives = 51/93 (54%), Gaps = 2/93 (2%)
Frame = +3
Query: 378 KAERQKELKRKFEQLKSERLTRYQGVNLYVKNLDDTIDDERLRKEFAPFGTITSAKVMLE 557
+ ++Q++ ++ +Q+ S+ L+ +YV ++ I ++ LR+ F PFG I S + +
Sbjct: 79 RQQKQQQENQQRQQMYSQALSIMS--RIYVGSISFEIREDMLRRAFDPFGPIKSINMSWD 136
Query: 558 D--GRSKGFGFVCFSSPEEATKAVTEMNGRIVG 650
G K F FV + PE A A MNG+++G
Sbjct: 137 PATGHHKTFAFVEYEVPEAALLAQESMNGQMLG 169
Score = 44.4 bits (100), Expect = 7e-05
Identities = 37/133 (27%), Positives = 65/133 (48%), Gaps = 12/133 (9%)
Frame = +3
Query: 6 KLEEAANKSIEKVNGMLLNGKMVYVGRFI----------PRKEREKELGEK-AKLFTNVY 152
++ EAA + E +NG +L G+ + V + P+ + ++ +K AK + VY
Sbjct: 151 EVPEAALLAQESMNGQMLGGRNLKVNSMMFQEMRLPQNMPQAQPIIDMVQKDAKKYFRVY 210
Query: 153 VKNFGEDFSDEMLKDMFEKYGRITSHKVMYKDDGNS-RGFGFVAFEDPDAAERACIELNG 329
V + D S+ LK +FE +G I ++ G RGFG++ F + + A +N
Sbjct: 211 VSSVHPDLSETDLKSVFEAFGEIVKCQLARAPTGRGHRGFGYLEFNNLTSQSEAIAGMNM 270
Query: 330 KELVEGKPLYVGR 368
+L G+ L VG+
Sbjct: 271 FDL-GGQYLRVGK 282
>Z36238-3|CAA85276.1| 404|Caenorhabditis elegans Hypothetical
protein R74.5a protein.
Length = 404
Score = 54.4 bits (125), Expect = 7e-08
Identities = 28/83 (33%), Positives = 48/83 (57%)
Frame = +3
Query: 147 VYVKNFGEDFSDEMLKDMFEKYGRITSHKVMYKDDGNSRGFGFVAFEDPDAAERACIELN 326
++V N + + L MFEK G + ++++ + G S+GFGFV ++PD A+RA E N
Sbjct: 102 LHVSNIPFKYREPDLTAMFEKVGPVVDVEIIFNERG-SKGFGFVTMQNPDDADRARAEFN 160
Query: 327 GKELVEGKPLYVGRAQKKAERQK 395
G +EG+ + V A ++ +K
Sbjct: 161 G-TTIEGRRVEVNLATQRVHNKK 182
Score = 42.3 bits (95), Expect = 3e-04
Identities = 19/63 (30%), Positives = 32/63 (50%)
Frame = +3
Query: 459 LYVKNLDDTIDDERLRKEFAPFGTITSAKVMLEDGRSKGFGFVCFSSPEEATKAVTEMNG 638
L+V N+ + L F G + +++ + SKGFGFV +P++A +A E NG
Sbjct: 102 LHVSNIPFKYREPDLTAMFEKVGPVVDVEIIFNERGSKGFGFVTMQNPDDADRARAEFNG 161
Query: 639 RIV 647
+
Sbjct: 162 TTI 164
>DQ485531-1|ABF22491.1| 404|Caenorhabditis elegans RNA-binding
protein ASD-1 protein.
Length = 404
Score = 54.4 bits (125), Expect = 7e-08
Identities = 28/83 (33%), Positives = 48/83 (57%)
Frame = +3
Query: 147 VYVKNFGEDFSDEMLKDMFEKYGRITSHKVMYKDDGNSRGFGFVAFEDPDAAERACIELN 326
++V N + + L MFEK G + ++++ + G S+GFGFV ++PD A+RA E N
Sbjct: 102 LHVSNIPFKYREPDLTAMFEKVGPVVDVEIIFNERG-SKGFGFVTMQNPDDADRARAEFN 160
Query: 327 GKELVEGKPLYVGRAQKKAERQK 395
G +EG+ + V A ++ +K
Sbjct: 161 G-TTIEGRRVEVNLATQRVHNKK 182
Score = 42.3 bits (95), Expect = 3e-04
Identities = 19/63 (30%), Positives = 32/63 (50%)
Frame = +3
Query: 459 LYVKNLDDTIDDERLRKEFAPFGTITSAKVMLEDGRSKGFGFVCFSSPEEATKAVTEMNG 638
L+V N+ + L F G + +++ + SKGFGFV +P++A +A E NG
Sbjct: 102 LHVSNIPFKYREPDLTAMFEKVGPVVDVEIIFNERGSKGFGFVTMQNPDDADRARAEFNG 161
Query: 639 RIV 647
+
Sbjct: 162 TTI 164
>Z81473-3|CAB03896.4| 514|Caenorhabditis elegans Hypothetical
protein C17D12.2 protein.
Length = 514
Score = 53.6 bits (123), Expect = 1e-07
Identities = 31/96 (32%), Positives = 49/96 (51%), Gaps = 2/96 (2%)
Frame = +3
Query: 369 AQKKAERQKELKRKFEQLKSERLTRYQGVNLYVKNLDDTIDDERLRKEFAPFGTITSAKV 548
A + A+ Q++ + + G NL++ +L D L + FAPFG I SAKV
Sbjct: 401 ALQLAQIQQQAAAALPMVTPREVLGPDGCNLFIYHLPQEFGDAELIQMFAPFGHIVSAKV 460
Query: 549 MLE--DGRSKGFGFVCFSSPEEATKAVTEMNGRIVG 650
++ +SK FGFV + + + A+T MNG +G
Sbjct: 461 FVDRATNQSKCFGFVSYDNIHSSQAAITAMNGFQIG 496
Score = 40.7 bits (91), Expect = 9e-04
Identities = 20/66 (30%), Positives = 38/66 (57%), Gaps = 1/66 (1%)
Frame = +3
Query: 144 NVYVKNFGEDFSDEMLKDMFEKYGRITSHKVMYKDDGN-SRGFGFVAFEDPDAAERACIE 320
N+++ + ++F D L MF +G I S KV N S+ FGFV++++ +++ A
Sbjct: 430 NLFIYHLPQEFGDAELIQMFAPFGHIVSAKVFVDRATNQSKCFGFVSYDNIHSSQAAITA 489
Query: 321 LNGKEL 338
+NG ++
Sbjct: 490 MNGFQI 495
>AY342388-1|AAQ19851.1| 514|Caenorhabditis elegans putative
RNA-binding protein protein.
Length = 514
Score = 53.6 bits (123), Expect = 1e-07
Identities = 31/96 (32%), Positives = 49/96 (51%), Gaps = 2/96 (2%)
Frame = +3
Query: 369 AQKKAERQKELKRKFEQLKSERLTRYQGVNLYVKNLDDTIDDERLRKEFAPFGTITSAKV 548
A + A+ Q++ + + G NL++ +L D L + FAPFG I SAKV
Sbjct: 401 ALQLAQIQQQAAAALPMVTPREVLGPDGCNLFIYHLPQEFGDAELIQMFAPFGHIVSAKV 460
Query: 549 MLE--DGRSKGFGFVCFSSPEEATKAVTEMNGRIVG 650
++ +SK FGFV + + + A+T MNG +G
Sbjct: 461 FVDRATNQSKCFGFVSYDNIHSSQAAITAMNGFQIG 496
Score = 40.7 bits (91), Expect = 9e-04
Identities = 20/66 (30%), Positives = 38/66 (57%), Gaps = 1/66 (1%)
Frame = +3
Query: 144 NVYVKNFGEDFSDEMLKDMFEKYGRITSHKVMYKDDGN-SRGFGFVAFEDPDAAERACIE 320
N+++ + ++F D L MF +G I S KV N S+ FGFV++++ +++ A
Sbjct: 430 NLFIYHLPQEFGDAELIQMFAPFGHIVSAKVFVDRATNQSKCFGFVSYDNIHSSQAAITA 489
Query: 321 LNGKEL 338
+NG ++
Sbjct: 490 MNGFQI 495
>Z73102-13|CAA97405.1| 836|Caenorhabditis elegans Hypothetical
protein B0035.12 protein.
Length = 836
Score = 53.2 bits (122), Expect = 2e-07
Identities = 35/125 (28%), Positives = 61/125 (48%), Gaps = 5/125 (4%)
Frame = +3
Query: 36 EKVNGMLLNGKMVYVGR--FIPRKEREKELGEKAKLF---TNVYVKNFGEDFSDEMLKDM 200
+K LL ++ GR FI + EK +G K + V+V+N +D+ LK +
Sbjct: 643 QKAQQALLKDRVPVKGRPMFISANDPEKRVGFKFSTTLEKSKVFVRNVHFQATDDELKAL 702
Query: 201 FEKYGRITSHKVMYKDDGNSRGFGFVAFEDPDAAERACIELNGKELVEGKPLYVGRAQKK 380
F K+G +TS + + DG +G FV F D +A+ + C+ K ++ + L V +
Sbjct: 703 FSKFGTVTSVRRVTHKDGKPKGIAFVDF-DTEASAQKCVASGDKLMLRERELEVALSNPP 761
Query: 381 AERQK 395
++ K
Sbjct: 762 VKKDK 766
Score = 52.8 bits (121), Expect = 2e-07
Identities = 41/160 (25%), Positives = 76/160 (47%), Gaps = 1/160 (0%)
Frame = +3
Query: 147 VYVKNFGEDFSDEMLKDMFEKYGRITSHKVMYKDDGNSRGFGFVAFEDPDAAERACIELN 326
++V N +++ ++ E I + D + RGF +V E+ A++A L
Sbjct: 595 IFVSNLDFTTTEDEIRQAIEGVASIRFARKANSDLVH-RGFAYVVMENDQKAQQAL--LK 651
Query: 327 GKELVEGKPLYVGRAQKKAERQKELKRKFEQLKSERLTRYQGVNLYVKNLDDTIDDERLR 506
+ V+G+P+++ + +K + KF T + ++V+N+ D+ L+
Sbjct: 652 DRVPVKGRPMFISAN----DPEKRVGFKFS-------TTLEKSKVFVRNVHFQATDDELK 700
Query: 507 KEFAPFGTITSA-KVMLEDGRSKGFGFVCFSSPEEATKAV 623
F+ FGT+TS +V +DG+ KG FV F + A K V
Sbjct: 701 ALFSKFGTVTSVRRVTHKDGKPKGIAFVDFDTEASAQKCV 740
>Z35601-1|CAA84667.2| 320|Caenorhabditis elegans Hypothetical
protein R10E9.1 protein.
Length = 320
Score = 52.4 bits (120), Expect = 3e-07
Identities = 48/164 (29%), Positives = 79/164 (48%), Gaps = 9/164 (5%)
Frame = +3
Query: 183 EMLKDMFEKYGRITSHKVMYKDDGN--SRGFGFVAFEDPDAAERACIELNGKE-LVEGKP 353
E L+D F ++G + VM +D +RGFGF+ F DP + ++ LN +E ++GK
Sbjct: 59 ENLRDYFGRFGEVNECMVM-RDPATKRARGFGFITFVDPSSVDKV---LNNREHELDGK- 113
Query: 354 LYVGRAQKKAERQKELKRKFEQLKSERLTRYQGVNLYVKNLDDTIDDERLRKEFAPFGTI 533
+ K K + K +T+ + V ++ L T E +++ F +G +
Sbjct: 114 ----KIDPKVAFPKRTQAKL-------VTKTKKV--FIGGLSATSTLEDMKQYFETYGKV 160
Query: 534 TSAKVMLEDG--RSKGFGFVCFSSPEEATKAVT----EMNGRIV 647
A +M + R +GFGFV F S E A K E+NG++V
Sbjct: 161 EDAMLMFDKATQRHRGFGFVTFDSDEVADKVCEIHFHEINGKMV 204
Score = 46.0 bits (104), Expect = 2e-05
Identities = 33/109 (30%), Positives = 55/109 (50%), Gaps = 1/109 (0%)
Frame = +3
Query: 57 LNGKMVYVGRFIPRKEREKELGEKAKLFTNVYVKNFGEDFSDEMLKDMFEKYGRITSHKV 236
L+GK + P++ + K L K K V++ + E +K FE YG++ +
Sbjct: 110 LDGKKIDPKVAFPKRTQAK-LVTKTK---KVFIGGLSATSTLEDMKQYFETYGKVEDAML 165
Query: 237 MY-KDDGNSRGFGFVAFEDPDAAERACIELNGKELVEGKPLYVGRAQKK 380
M+ K RGFGFV F+ + A++ C E++ E + GK + +AQ K
Sbjct: 166 MFDKATQRHRGFGFVTFDSDEVADKVC-EIHFHE-INGKMVECKKAQPK 212
Score = 34.7 bits (76), Expect = 0.058
Identities = 18/66 (27%), Positives = 28/66 (42%), Gaps = 2/66 (3%)
Frame = +3
Query: 459 LYVKNLDDTIDDERLRKEFAPFGTITSAKVMLEDG--RSKGFGFVCFSSPEEATKAVTEM 632
+++ L E LR F FG + VM + R++GFGF+ F P K +
Sbjct: 47 MFIGGLSWQTTAENLRDYFGRFGEVNECMVMRDPATKRARGFGFITFVDPSSVDKVLNNR 106
Query: 633 NGRIVG 650
+ G
Sbjct: 107 EHELDG 112
>AB036738-1|BAB13470.1| 320|Caenorhabditis elegans neural
RNA-binding protein MSI-1 protein.
Length = 320
Score = 52.4 bits (120), Expect = 3e-07
Identities = 48/164 (29%), Positives = 79/164 (48%), Gaps = 9/164 (5%)
Frame = +3
Query: 183 EMLKDMFEKYGRITSHKVMYKDDGN--SRGFGFVAFEDPDAAERACIELNGKE-LVEGKP 353
E L+D F ++G + VM +D +RGFGF+ F DP + ++ LN +E ++GK
Sbjct: 59 ENLRDYFGRFGEVNECMVM-RDPATKRARGFGFITFVDPSSVDKV---LNNREHELDGK- 113
Query: 354 LYVGRAQKKAERQKELKRKFEQLKSERLTRYQGVNLYVKNLDDTIDDERLRKEFAPFGTI 533
+ K K + K +T+ + V ++ L T E +++ F +G +
Sbjct: 114 ----KIDPKVAFPKRTQAKL-------VTKTKKV--FIGGLSATSTLEDMKQYFETYGKV 160
Query: 534 TSAKVMLEDG--RSKGFGFVCFSSPEEATKAVT----EMNGRIV 647
A +M + R +GFGFV F S E A K E+NG++V
Sbjct: 161 EDAMLMFDKATQRHRGFGFVTFDSDEVADKVCEIHFHEINGKMV 204
Score = 46.0 bits (104), Expect = 2e-05
Identities = 33/109 (30%), Positives = 55/109 (50%), Gaps = 1/109 (0%)
Frame = +3
Query: 57 LNGKMVYVGRFIPRKEREKELGEKAKLFTNVYVKNFGEDFSDEMLKDMFEKYGRITSHKV 236
L+GK + P++ + K L K K V++ + E +K FE YG++ +
Sbjct: 110 LDGKKIDPKVAFPKRTQAK-LVTKTK---KVFIGGLSATSTLEDMKQYFETYGKVEDAML 165
Query: 237 MY-KDDGNSRGFGFVAFEDPDAAERACIELNGKELVEGKPLYVGRAQKK 380
M+ K RGFGFV F+ + A++ C E++ E + GK + +AQ K
Sbjct: 166 MFDKATQRHRGFGFVTFDSDEVADKVC-EIHFHE-INGKMVECKKAQPK 212
Score = 34.7 bits (76), Expect = 0.058
Identities = 18/66 (27%), Positives = 28/66 (42%), Gaps = 2/66 (3%)
Frame = +3
Query: 459 LYVKNLDDTIDDERLRKEFAPFGTITSAKVMLEDG--RSKGFGFVCFSSPEEATKAVTEM 632
+++ L E LR F FG + VM + R++GFGF+ F P K +
Sbjct: 47 MFIGGLSWQTTAENLRDYFGRFGEVNECMVMRDPATKRARGFGFITFVDPSSVDKVLNNR 106
Query: 633 NGRIVG 650
+ G
Sbjct: 107 EHELDG 112
>Z83230-6|CAB05746.1| 336|Caenorhabditis elegans Hypothetical
protein F56A8.6 protein.
Length = 336
Score = 52.0 bits (119), Expect = 4e-07
Identities = 28/77 (36%), Positives = 45/77 (58%), Gaps = 1/77 (1%)
Frame = +3
Query: 144 NVYVKNFGEDFSDEMLKDMFEKYGRITSHKVMY-KDDGNSRGFGFVAFEDPDAAERACIE 320
+V+V N D S++ ++ +F K G + S K+++ ++ G +G+GF+ F D AE A
Sbjct: 19 SVFVGNISYDVSEDTIRSIFSKAGNVLSIKMVHDRETGKPKGYGFIEFPDIQTAEVAIRN 78
Query: 321 LNGKELVEGKPLYVGRA 371
LNG EL G+ L V A
Sbjct: 79 LNGYEL-SGRILRVDSA 94
Score = 39.5 bits (88), Expect = 0.002
Identities = 18/63 (28%), Positives = 36/63 (57%), Gaps = 2/63 (3%)
Frame = +3
Query: 456 NLYVKNLDDTIDDERLRKEFAPFGTITSAKVM--LEDGRSKGFGFVCFSSPEEATKAVTE 629
+++V N+ + ++ +R F+ G + S K++ E G+ KG+GF+ F + A A+
Sbjct: 19 SVFVGNISYDVSEDTIRSIFSKAGNVLSIKMVHDRETGKPKGYGFIEFPDIQTAEVAIRN 78
Query: 630 MNG 638
+NG
Sbjct: 79 LNG 81
>AC024826-10|AAM97977.1| 435|Caenorhabditis elegans Hypothetical
protein Y55F3AM.3c protein.
Length = 435
Score = 52.0 bits (119), Expect = 4e-07
Identities = 29/108 (26%), Positives = 57/108 (52%), Gaps = 1/108 (0%)
Frame = +3
Query: 141 TNVYVKNFGEDFSDEMLKDMFEKYGRITSHKVMYKDDGNSRGFGFVAFEDPDAAERACIE 320
T+V V+N ++M++D+FE +GRI + + +RGF + F + D A+++C +
Sbjct: 127 THVLVENLHPKIDEKMIRDIFESFGRIEKIDLEVDSNRENRGFATITFRNADDAQKSCEQ 186
Query: 321 LNGKELVEGKPLYVG-RAQKKAERQKELKRKFEQLKSERLTRYQGVNL 461
LN EL G+ + + + + +A K+ + Q + + QG +L
Sbjct: 187 LNNFELA-GRCIRLSIKQESQAPAVKKEEASIHQRSLDDVGDRQGFSL 233
>AC024826-8|AAF60795.2| 580|Caenorhabditis elegans Hypothetical
protein Y55F3AM.3a protein.
Length = 580
Score = 52.0 bits (119), Expect = 4e-07
Identities = 29/108 (26%), Positives = 57/108 (52%), Gaps = 1/108 (0%)
Frame = +3
Query: 141 TNVYVKNFGEDFSDEMLKDMFEKYGRITSHKVMYKDDGNSRGFGFVAFEDPDAAERACIE 320
T+V V+N ++M++D+FE +GRI + + +RGF + F + D A+++C +
Sbjct: 272 THVLVENLHPKIDEKMIRDIFESFGRIEKIDLEVDSNRENRGFATITFRNADDAQKSCEQ 331
Query: 321 LNGKELVEGKPLYVG-RAQKKAERQKELKRKFEQLKSERLTRYQGVNL 461
LN EL G+ + + + + +A K+ + Q + + QG +L
Sbjct: 332 LNNFELA-GRCIRLSIKQESQAPAVKKEEASIHQRSLDDVGDRQGFSL 378
>AC024818-2|AAF60781.1| 302|Caenorhabditis elegans Temporarily
assigned gene nameprotein 262 protein.
Length = 302
Score = 52.0 bits (119), Expect = 4e-07
Identities = 31/94 (32%), Positives = 51/94 (54%), Gaps = 1/94 (1%)
Frame = +3
Query: 147 VYVKNFGEDFSDEMLKDMFEKYGRITSHKVMYKDDGN-SRGFGFVAFEDPDAAERACIEL 323
V+ + G + SDE+L F KY KV+ + N S+G+GFV+F D + RA E+
Sbjct: 205 VFCGDLGNEVSDELLAKAFRKYPSFQKAKVVRESRTNKSKGYGFVSFRDSEDYVRAMREM 264
Query: 324 NGKELVEGKPLYVGRAQKKAERQKELKRKFEQLK 425
+GK V +P+ + ++ K +K+K +Q K
Sbjct: 265 DGK-YVGNRPIKLRKSAWKERNIDVIKQKRKQKK 297
Score = 48.8 bits (111), Expect = 3e-06
Identities = 24/66 (36%), Positives = 39/66 (59%), Gaps = 2/66 (3%)
Frame = +3
Query: 459 LYVKNLDDTIDDERLRKEFAPFGTITSAKVMLED--GRSKGFGFVCFSSPEEATKAVTEM 632
++ +L + + DE L K F + + AKV+ E +SKG+GFV F E+ +A+ EM
Sbjct: 205 VFCGDLGNEVSDELLAKAFRKYPSFQKAKVVRESRTNKSKGYGFVSFRDSEDYVRAMREM 264
Query: 633 NGRIVG 650
+G+ VG
Sbjct: 265 DGKYVG 270
>Z36238-4|CAD82915.1| 286|Caenorhabditis elegans Hypothetical
protein R74.5b protein.
Length = 286
Score = 51.2 bits (117), Expect = 6e-07
Identities = 25/66 (37%), Positives = 41/66 (62%)
Frame = +3
Query: 198 MFEKYGRITSHKVMYKDDGNSRGFGFVAFEDPDAAERACIELNGKELVEGKPLYVGRAQK 377
MFEK G + ++++ + G S+GFGFV ++PD A+RA E NG +EG+ + V A +
Sbjct: 1 MFEKVGPVVDVEIIFNERG-SKGFGFVTMQNPDDADRARAEFNG-TTIEGRRVEVNLATQ 58
Query: 378 KAERQK 395
+ +K
Sbjct: 59 RVHNKK 64
Score = 38.7 bits (86), Expect = 0.004
Identities = 15/45 (33%), Positives = 25/45 (55%)
Frame = +3
Query: 513 FAPFGTITSAKVMLEDGRSKGFGFVCFSSPEEATKAVTEMNGRIV 647
F G + +++ + SKGFGFV +P++A +A E NG +
Sbjct: 2 FEKVGPVVDVEIIFNERGSKGFGFVTMQNPDDADRARAEFNGTTI 46
>AF098501-6|AAL38960.1| 315|Caenorhabditis elegans Hypothetical
protein H28G03.1b protein.
Length = 315
Score = 50.8 bits (116), Expect = 8e-07
Identities = 41/168 (24%), Positives = 76/168 (45%), Gaps = 3/168 (1%)
Frame = +3
Query: 147 VYVKNFGEDFSDEMLKDMFEKYGRITSHKVMYKDDG--NSRGFGFVAFEDPDAAERACIE 320
+++ D +DE L + F ++G + ++ +D +SRGFGFV F +AE A +
Sbjct: 51 LFIGGLSHDTTDEQLGNYFSQWGPVVD-AIVIRDPNTKHSRGFGFVTFASIFSAESAMND 109
Query: 321 LNGKELVEGKPLYVGRAQKKAERQKELKRKFEQLKSERLTRYQGVNLYVKNLDDTIDD-E 497
K + GK + RA + + + F + G L + + + + +
Sbjct: 110 RPHK--LGGKTVDSKRAIPREQMSSMIPPPFFETDPA-----PGCKLLLNGITNGVHSVD 162
Query: 498 RLRKEFAPFGTITSAKVMLEDGRSKGFGFVCFSSPEEATKAVTEMNGR 641
LR F FGT+ +++ G+ +G GFV + E A + + +GR
Sbjct: 163 SLRVYFETFGTLDQVEIL---GQPRGLGFVIYEDKESADRCLAHNSGR 207
Score = 39.9 bits (89), Expect = 0.002
Identities = 36/145 (24%), Positives = 58/145 (40%), Gaps = 4/145 (2%)
Frame = +3
Query: 12 EEAANKSIEKVNGMLLNGKMVY----VGRFIPRKEREKELGEKAKLFTNVYVKNFGEDFS 179
E A N K+ G ++ K + IP E + KL N S
Sbjct: 104 ESAMNDRPHKLGGKTVDSKRAIPREQMSSMIPPPFFETDPAPGCKLLLNGITNGV---HS 160
Query: 180 DEMLKDMFEKYGRITSHKVMYKDDGNSRGFGFVAFEDPDAAERACIELNGKELVEGKPLY 359
+ L+ FE +G + +++ G RG GFV +ED ++A+R +G+ +V + +
Sbjct: 161 VDSLRVYFETFGTLDQVEIL----GQPRGLGFVIYEDKESADRCLAHNSGRHIVNERKIE 216
Query: 360 VGRAQKKAERQKELKRKFEQLKSER 434
V K KR Q S+R
Sbjct: 217 VRVFTKHPNGSTYWKRPQSQSHSQR 241
Score = 35.1 bits (77), Expect = 0.044
Identities = 20/66 (30%), Positives = 34/66 (51%), Gaps = 2/66 (3%)
Frame = +3
Query: 459 LYVKNLDDTIDDERLRKEFAPFGTITSAKVMLEDG--RSKGFGFVCFSSPEEATKAVTEM 632
L++ L DE+L F+ +G + A V+ + S+GFGFV F+S A A+ +
Sbjct: 51 LFIGGLSHDTTDEQLGNYFSQWGPVVDAIVIRDPNTKHSRGFGFVTFASIFSAESAMNDR 110
Query: 633 NGRIVG 650
++ G
Sbjct: 111 PHKLGG 116
>AF098501-5|AAM69104.1| 335|Caenorhabditis elegans Hypothetical
protein H28G03.1c protein.
Length = 335
Score = 50.8 bits (116), Expect = 8e-07
Identities = 41/168 (24%), Positives = 76/168 (45%), Gaps = 3/168 (1%)
Frame = +3
Query: 147 VYVKNFGEDFSDEMLKDMFEKYGRITSHKVMYKDDG--NSRGFGFVAFEDPDAAERACIE 320
+++ D +DE L + F ++G + ++ +D +SRGFGFV F +AE A +
Sbjct: 71 LFIGGLSHDTTDEQLGNYFSQWGPVVD-AIVIRDPNTKHSRGFGFVTFASIFSAESAMND 129
Query: 321 LNGKELVEGKPLYVGRAQKKAERQKELKRKFEQLKSERLTRYQGVNLYVKNLDDTIDD-E 497
K + GK + RA + + + F + G L + + + + +
Sbjct: 130 RPHK--LGGKTVDSKRAIPREQMSSMIPPPFFETDPA-----PGCKLLLNGITNGVHSVD 182
Query: 498 RLRKEFAPFGTITSAKVMLEDGRSKGFGFVCFSSPEEATKAVTEMNGR 641
LR F FGT+ +++ G+ +G GFV + E A + + +GR
Sbjct: 183 SLRVYFETFGTLDQVEIL---GQPRGLGFVIYEDKESADRCLAHNSGR 227
Score = 39.9 bits (89), Expect = 0.002
Identities = 36/145 (24%), Positives = 58/145 (40%), Gaps = 4/145 (2%)
Frame = +3
Query: 12 EEAANKSIEKVNGMLLNGKMVY----VGRFIPRKEREKELGEKAKLFTNVYVKNFGEDFS 179
E A N K+ G ++ K + IP E + KL N S
Sbjct: 124 ESAMNDRPHKLGGKTVDSKRAIPREQMSSMIPPPFFETDPAPGCKLLLNGITNGV---HS 180
Query: 180 DEMLKDMFEKYGRITSHKVMYKDDGNSRGFGFVAFEDPDAAERACIELNGKELVEGKPLY 359
+ L+ FE +G + +++ G RG GFV +ED ++A+R +G+ +V + +
Sbjct: 181 VDSLRVYFETFGTLDQVEIL----GQPRGLGFVIYEDKESADRCLAHNSGRHIVNERKIE 236
Query: 360 VGRAQKKAERQKELKRKFEQLKSER 434
V K KR Q S+R
Sbjct: 237 VRVFTKHPNGSTYWKRPQSQSHSQR 261
Score = 35.1 bits (77), Expect = 0.044
Identities = 20/66 (30%), Positives = 34/66 (51%), Gaps = 2/66 (3%)
Frame = +3
Query: 459 LYVKNLDDTIDDERLRKEFAPFGTITSAKVMLEDG--RSKGFGFVCFSSPEEATKAVTEM 632
L++ L DE+L F+ +G + A V+ + S+GFGFV F+S A A+ +
Sbjct: 71 LFIGGLSHDTTDEQLGNYFSQWGPVVDAIVIRDPNTKHSRGFGFVTFASIFSAESAMNDR 130
Query: 633 NGRIVG 650
++ G
Sbjct: 131 PHKLGG 136
>AF098501-4|AAL38959.1| 336|Caenorhabditis elegans Hypothetical
protein H28G03.1a protein.
Length = 336
Score = 50.8 bits (116), Expect = 8e-07
Identities = 41/168 (24%), Positives = 76/168 (45%), Gaps = 3/168 (1%)
Frame = +3
Query: 147 VYVKNFGEDFSDEMLKDMFEKYGRITSHKVMYKDDG--NSRGFGFVAFEDPDAAERACIE 320
+++ D +DE L + F ++G + ++ +D +SRGFGFV F +AE A +
Sbjct: 72 LFIGGLSHDTTDEQLGNYFSQWGPVVD-AIVIRDPNTKHSRGFGFVTFASIFSAESAMND 130
Query: 321 LNGKELVEGKPLYVGRAQKKAERQKELKRKFEQLKSERLTRYQGVNLYVKNLDDTIDD-E 497
K + GK + RA + + + F + G L + + + + +
Sbjct: 131 RPHK--LGGKTVDSKRAIPREQMSSMIPPPFFETDPA-----PGCKLLLNGITNGVHSVD 183
Query: 498 RLRKEFAPFGTITSAKVMLEDGRSKGFGFVCFSSPEEATKAVTEMNGR 641
LR F FGT+ +++ G+ +G GFV + E A + + +GR
Sbjct: 184 SLRVYFETFGTLDQVEIL---GQPRGLGFVIYEDKESADRCLAHNSGR 228
Score = 39.9 bits (89), Expect = 0.002
Identities = 36/145 (24%), Positives = 58/145 (40%), Gaps = 4/145 (2%)
Frame = +3
Query: 12 EEAANKSIEKVNGMLLNGKMVY----VGRFIPRKEREKELGEKAKLFTNVYVKNFGEDFS 179
E A N K+ G ++ K + IP E + KL N S
Sbjct: 125 ESAMNDRPHKLGGKTVDSKRAIPREQMSSMIPPPFFETDPAPGCKLLLNGITNGV---HS 181
Query: 180 DEMLKDMFEKYGRITSHKVMYKDDGNSRGFGFVAFEDPDAAERACIELNGKELVEGKPLY 359
+ L+ FE +G + +++ G RG GFV +ED ++A+R +G+ +V + +
Sbjct: 182 VDSLRVYFETFGTLDQVEIL----GQPRGLGFVIYEDKESADRCLAHNSGRHIVNERKIE 237
Query: 360 VGRAQKKAERQKELKRKFEQLKSER 434
V K KR Q S+R
Sbjct: 238 VRVFTKHPNGSTYWKRPQSQSHSQR 262
Score = 35.1 bits (77), Expect = 0.044
Identities = 20/66 (30%), Positives = 34/66 (51%), Gaps = 2/66 (3%)
Frame = +3
Query: 459 LYVKNLDDTIDDERLRKEFAPFGTITSAKVMLEDG--RSKGFGFVCFSSPEEATKAVTEM 632
L++ L DE+L F+ +G + A V+ + S+GFGFV F+S A A+ +
Sbjct: 72 LFIGGLSHDTTDEQLGNYFSQWGPVVDAIVIRDPNTKHSRGFGFVTFASIFSAESAMNDR 131
Query: 633 NGRIVG 650
++ G
Sbjct: 132 PHKLGG 137
>AF047662-1|AAC04442.1| 248|Caenorhabditis elegans Suppressor
protein 12 protein.
Length = 248
Score = 50.8 bits (116), Expect = 8e-07
Identities = 29/89 (32%), Positives = 49/89 (55%), Gaps = 1/89 (1%)
Frame = +3
Query: 108 EKELGEKAKLFTNVYVKNFGEDFSDEMLKDMFEKYGRITSHKVMY-KDDGNSRGFGFVAF 284
E +G + +FT ++V SD+ L + FE++G I V+ ++ SRG+GFV
Sbjct: 24 EPVVGSRDTMFTKIFVGGLPYHTSDKTLHEYFEQFGDIEEAVVITDRNTQKSRGYGFVTM 83
Query: 285 EDPDAAERACIELNGKELVEGKPLYVGRA 371
+D +AERAC + N +++G+ V A
Sbjct: 84 KDRASAERACKDPN--PIIDGRKANVNLA 110
Score = 31.5 bits (68), Expect = 0.54
Identities = 20/66 (30%), Positives = 31/66 (46%), Gaps = 2/66 (3%)
Frame = +3
Query: 459 LYVKNLDDTIDDERLRKEFAPFGTITSAKVMLEDG--RSKGFGFVCFSSPEEATKAVTEM 632
++V L D+ L + F FG I A V+ + +S+G+GFV A +A +
Sbjct: 37 IFVGGLPYHTSDKTLHEYFEQFGDIEEAVVITDRNTQKSRGYGFVTMKDRASAERACKDP 96
Query: 633 NGRIVG 650
N I G
Sbjct: 97 NPIIDG 102
>Z81108-1|CAB03236.1| 83|Caenorhabditis elegans Hypothetical
protein R09B3.2 protein.
Length = 83
Score = 50.0 bits (114), Expect = 1e-06
Identities = 27/79 (34%), Positives = 45/79 (56%), Gaps = 1/79 (1%)
Frame = +3
Query: 144 NVYVKNFGEDFSDEMLKDMFEKYGRITSHKVMY-KDDGNSRGFGFVAFEDPDAAERACIE 320
+VYV N ++E L + F G+I + +++ ++ G RGF F+ F + +A+RA +
Sbjct: 6 SVYVGNAPFQTTEEELGNFFSSIGQINNVRIVCDRETGRPRGFAFIEFAEEGSAQRAVEQ 65
Query: 321 LNGKELVEGKPLYVGRAQK 377
+NG E G+PL V A K
Sbjct: 66 MNGAEF-NGRPLRVNLANK 83
Score = 40.7 bits (91), Expect = 9e-04
Identities = 21/63 (33%), Positives = 34/63 (53%), Gaps = 2/63 (3%)
Frame = +3
Query: 456 NLYVKNLDDTIDDERLRKEFAPFGTITSAKVML--EDGRSKGFGFVCFSSPEEATKAVTE 629
++YV N +E L F+ G I + +++ E GR +GF F+ F+ A +AV +
Sbjct: 6 SVYVGNAPFQTTEEELGNFFSSIGQINNVRIVCDRETGRPRGFAFIEFAEEGSAQRAVEQ 65
Query: 630 MNG 638
MNG
Sbjct: 66 MNG 68
>U55363-5|AAA97963.1| 351|Caenorhabditis elegans Spindle
orientation defective protein4 protein.
Length = 351
Score = 47.6 bits (108), Expect = 8e-06
Identities = 27/75 (36%), Positives = 44/75 (58%)
Frame = +3
Query: 147 VYVKNFGEDFSDEMLKDMFEKYGRITSHKVMYKDDGNSRGFGFVAFEDPDAAERACIELN 326
+YV N F ++ L MF YGR+ S +++ D G S+GFGFV + ++ E+A L+
Sbjct: 53 IYVSNIPFSFREQDLAAMFFAYGRVLSVEIVTNDRG-SKGFGFVTLDSIESCEKARAALH 111
Query: 327 GKELVEGKPLYVGRA 371
+ V+G+ + V RA
Sbjct: 112 -ESHVQGRIIEVRRA 125
Score = 40.7 bits (91), Expect = 9e-04
Identities = 19/54 (35%), Positives = 29/54 (53%)
Frame = +3
Query: 459 LYVKNLDDTIDDERLRKEFAPFGTITSAKVMLEDGRSKGFGFVCFSSPEEATKA 620
+YV N+ + ++ L F +G + S +++ D SKGFGFV S E KA
Sbjct: 53 IYVSNIPFSFREQDLAAMFFAYGRVLSVEIVTNDRGSKGFGFVTLDSIESCEKA 106
>AB052819-1|BAC65239.1| 351|Caenorhabditis elegans PIP-1 protein.
Length = 351
Score = 47.6 bits (108), Expect = 8e-06
Identities = 27/75 (36%), Positives = 44/75 (58%)
Frame = +3
Query: 147 VYVKNFGEDFSDEMLKDMFEKYGRITSHKVMYKDDGNSRGFGFVAFEDPDAAERACIELN 326
+YV N F ++ L MF YGR+ S +++ D G S+GFGFV + ++ E+A L+
Sbjct: 53 IYVSNIPFSFREQDLAAMFFAYGRVLSVEIVTNDRG-SKGFGFVTLDSIESCEKARAALH 111
Query: 327 GKELVEGKPLYVGRA 371
+ V+G+ + V RA
Sbjct: 112 -ESHVQGRIIEVRRA 125
Score = 40.7 bits (91), Expect = 9e-04
Identities = 19/54 (35%), Positives = 29/54 (53%)
Frame = +3
Query: 459 LYVKNLDDTIDDERLRKEFAPFGTITSAKVMLEDGRSKGFGFVCFSSPEEATKA 620
+YV N+ + ++ L F +G + S +++ D SKGFGFV S E KA
Sbjct: 53 IYVSNIPFSFREQDLAAMFFAYGRVLSVEIVTNDRGSKGFGFVTLDSIESCEKA 106
>EF523769-1|ABS18835.1| 327|Caenorhabditis elegans ELAV-type RNA
binding protein variantD protein.
Length = 327
Score = 47.2 bits (107), Expect = 1e-05
Identities = 44/165 (26%), Positives = 76/165 (46%), Gaps = 2/165 (1%)
Frame = +3
Query: 147 VYVKNFGEDFSDEMLKDMFEKYGRITSHKVMY-KDDGNSRGFGFVAFEDPDAAERACIEL 323
++V +++ + +FEKYG + S ++ K S+G FV F A A L
Sbjct: 57 MFVGQIPRQWNETDCRRLFEKYGSVFSCNILRDKSTQASKGCCFVTFYHRKDAIEAQGAL 116
Query: 324 NGKELVEGKPLYVGRAQKKAERQKELKRKFEQLKSERLTRYQGVNLYVKNLDDTIDDERL 503
+ +++EG ++ K A+ + +RK L++ L ++E L
Sbjct: 117 HNIKVIEG--MHHPVQMKPADTENRNERK----------------LFIGQLSKKHNEENL 158
Query: 504 RKEFAPFGTITSAKVMLE-DGRSKGFGFVCFSSPEEATKAVTEMN 635
R+ FA FG I V+ + DG+S+G FV F++ A A EM+
Sbjct: 159 REIFAKFGHIEDCSVLRDQDGKSRGCAFVTFTNRSCAVVATKEMH 203
Score = 41.1 bits (92), Expect = 7e-04
Identities = 19/66 (28%), Positives = 35/66 (53%)
Frame = +3
Query: 147 VYVKNFGEDFSDEMLKDMFEKYGRITSHKVMYKDDGNSRGFGFVAFEDPDAAERACIELN 326
+++ + ++E L+++F K+G I V+ DG SRG FV F + A A E++
Sbjct: 144 LFIGQLSKKHNEENLREIFAKFGHIEDCSVLRDQDGKSRGCAFVTFTNRSCAVVATKEMH 203
Query: 327 GKELVE 344
+ +E
Sbjct: 204 HSQTME 209
>EF523768-1|ABS18834.1| 378|Caenorhabditis elegans ELAV-type RNA
binding protein variantC protein.
Length = 378
Score = 47.2 bits (107), Expect = 1e-05
Identities = 44/165 (26%), Positives = 76/165 (46%), Gaps = 2/165 (1%)
Frame = +3
Query: 147 VYVKNFGEDFSDEMLKDMFEKYGRITSHKVMY-KDDGNSRGFGFVAFEDPDAAERACIEL 323
++V +++ + +FEKYG + S ++ K S+G FV F A A L
Sbjct: 57 MFVGQIPRQWNETDCRRLFEKYGSVFSCNILRDKSTQASKGCCFVTFYHRKDAIEAQGAL 116
Query: 324 NGKELVEGKPLYVGRAQKKAERQKELKRKFEQLKSERLTRYQGVNLYVKNLDDTIDDERL 503
+ +++EG ++ K A+ + +RK L++ L ++E L
Sbjct: 117 HNIKVIEG--MHHPVQMKPADTENRNERK----------------LFIGQLSKKHNEENL 158
Query: 504 RKEFAPFGTITSAKVMLE-DGRSKGFGFVCFSSPEEATKAVTEMN 635
R+ FA FG I V+ + DG+S+G FV F++ A A EM+
Sbjct: 159 REIFAKFGHIEDCSVLRDQDGKSRGCAFVTFTNRSCAVVATKEMH 203
Score = 46.4 bits (105), Expect = 2e-05
Identities = 27/90 (30%), Positives = 47/90 (52%), Gaps = 2/90 (2%)
Frame = +3
Query: 147 VYVKNFGEDFSDEMLKDMFEKYGRITSHKVMYKDDGNSRGFGFVAFEDPDAAERACIELN 326
+++ + ++E L+++F K+G I V+ DG SRG FV F + A A E++
Sbjct: 144 LFIGQLSKKHNEENLREIFAKFGHIEDCSVLRDQDGKSRGCAFVTFTNRSCAVVATKEMH 203
Query: 327 GKELVEG--KPLYVGRAQKKAERQKELKRK 410
+ +EG PL V A ++ K++K K
Sbjct: 204 HSQTMEGCSAPLVVKFAD--TQKDKDVKTK 231
>Z81106-3|CAB03222.1| 84|Caenorhabditis elegans Hypothetical
protein R06C1.4 protein.
Length = 84
Score = 45.6 bits (103), Expect = 3e-05
Identities = 26/79 (32%), Positives = 42/79 (53%), Gaps = 1/79 (1%)
Frame = +3
Query: 144 NVYVKNFGEDFSDEMLKDMFEKYGRITSHKVMY-KDDGNSRGFGFVAFEDPDAAERACIE 320
+VYV N ++E + + F G + + +++Y ++ G RGF FV F + A+RA +
Sbjct: 7 SVYVGNVPYQGTEEEIGNYFAAVGHVNNVRIVYDRETGRPRGFAFVEFSEEAGAQRAVEQ 66
Query: 321 LNGKELVEGKPLYVGRAQK 377
LNG G+ L V A K
Sbjct: 67 LNGVAF-NGRNLRVNYANK 84
Score = 44.0 bits (99), Expect = 9e-05
Identities = 23/66 (34%), Positives = 37/66 (56%), Gaps = 2/66 (3%)
Frame = +3
Query: 447 QGVNLYVKNLDDTIDDERLRKEFAPFGTITSAKVML--EDGRSKGFGFVCFSSPEEATKA 620
QG ++YV N+ +E + FA G + + +++ E GR +GF FV FS A +A
Sbjct: 4 QGFSVYVGNVPYQGTEEEIGNYFAAVGHVNNVRIVYDRETGRPRGFAFVEFSEEAGAQRA 63
Query: 621 VTEMNG 638
V ++NG
Sbjct: 64 VEQLNG 69
>AL117204-22|CAB55151.1| 331|Caenorhabditis elegans Hypothetical
protein Y116A8C.34 protein.
Length = 331
Score = 44.8 bits (101), Expect = 5e-05
Identities = 21/61 (34%), Positives = 33/61 (54%), Gaps = 2/61 (3%)
Frame = +3
Query: 459 LYVKNLDDTIDDERLRKEFAPFGTITSAKVML--EDGRSKGFGFVCFSSPEEATKAVTEM 632
LYV + + ++ L F PFG + + + + E G+ +GFGFV F E+A A+ M
Sbjct: 13 LYVGGFTEDVTEKVLMAAFIPFGDVVAISIPMDYESGKHRGFGFVEFDMAEDAAMAIDNM 72
Query: 633 N 635
N
Sbjct: 73 N 73
Score = 44.4 bits (100), Expect = 7e-05
Identities = 34/97 (35%), Positives = 49/97 (50%), Gaps = 4/97 (4%)
Frame = +3
Query: 147 VYVKNFGEDFSDEMLKDMFEKYGRITSHKV-MYKDDGNSRGFGFVAFEDPDAAERACIEL 323
+YV F ED ++++L F +G + + + M + G RGFGFV F+ + A A +
Sbjct: 13 LYVGGFTEDVTEKVLMAAFIPFGDVVAISIPMDYESGKHRGFGFVEFDMAEDAAMAIDNM 72
Query: 324 NGKELVEGKPLYV--GRAQKKAER-QKELKRKFEQLK 425
N EL GK + V R K ER QK + E LK
Sbjct: 73 NESELF-GKTIRVNFARPPKATERSQKPVWADDEWLK 108
>AL137227-1|CAB70238.2| 611|Caenorhabditis elegans Hypothetical
protein F58D5.1 protein.
Length = 611
Score = 44.4 bits (100), Expect = 7e-05
Identities = 25/73 (34%), Positives = 39/73 (53%), Gaps = 1/73 (1%)
Frame = +3
Query: 147 VYVKNFGEDFSDEMLKDMFEKYGRITSHKVMYKD-DGNSRGFGFVAFEDPDAAERACIEL 323
+YV + D ++ L +FEK G+I ++M G SRG+ FV + + + A A
Sbjct: 202 IYVGHIPTDVFEDTLVPLFEKSGKIWDLRLMMDPMSGASRGYAFVTYCNKEDAAAAAKTY 261
Query: 324 NGKELVEGKPLYV 362
+G E+ GKPL V
Sbjct: 262 DGHEISTGKPLKV 274
>Z83119-2|CAB05579.2| 608|Caenorhabditis elegans Hypothetical
protein R05H10.2 protein.
Length = 608
Score = 44.0 bits (99), Expect = 9e-05
Identities = 22/59 (37%), Positives = 34/59 (57%), Gaps = 1/59 (1%)
Frame = +3
Query: 147 VYVKNFGEDFSDEMLKDMFEKYGRITSHKVM-YKDDGNSRGFGFVAFEDPDAAERACIE 320
V+++N D +E++K+ K+G+I + YKD G+S+G FV F P A CIE
Sbjct: 265 VFLRNLSYDTKEELIKEELSKFGKIDLAIICKYKDSGHSKGTAFVHFSTPIEASN-CIE 322
Score = 41.5 bits (93), Expect = 5e-04
Identities = 26/90 (28%), Positives = 47/90 (52%), Gaps = 2/90 (2%)
Frame = +3
Query: 384 ERQKELKRKFEQLKSERLTRYQGVNLYVKNLDDTIDDERLRKEFAPFGTITSAKVML--E 557
E K+ K QLK++ +G ++++NL +E +++E + FG I A + +
Sbjct: 241 EPAKKPKNPKAQLKTDESIT-EGKVVFLRNLSYDTKEELIKEELSKFGKIDLAIICKYKD 299
Query: 558 DGRSKGFGFVCFSSPEEATKAVTEMNGRIV 647
G SKG FV FS+P EA+ + + ++
Sbjct: 300 SGHSKGTAFVHFSTPIEASNCIEGVEDGVI 329
Score = 31.1 bits (67), Expect = 0.71
Identities = 31/99 (31%), Positives = 45/99 (45%), Gaps = 13/99 (13%)
Frame = +3
Query: 378 KAERQKELKRKFEQLKSERLTRY-QGVNLYVKNLDDTIDDERLR----KEFAPFGTITSA 542
K ER E RK K E + V L + NL I+D +L+ K +P IT
Sbjct: 389 KRERIAEAMRK----KLENTNMFISPVRLCIHNLPQKINDVKLKELAQKFTSPGALITEC 444
Query: 543 KVMLE------DGRSK--GFGFVCFSSPEEATKAVTEMN 635
+V ++ DG+ K GFGFV F A + + ++N
Sbjct: 445 RVWMDKKRLTPDGKPKSSGFGFVAFKEHMHALECLKKLN 483
>Z81108-4|CAB03237.1| 85|Caenorhabditis elegans Hypothetical
protein R09B3.3 protein.
Length = 85
Score = 44.0 bits (99), Expect = 9e-05
Identities = 25/80 (31%), Positives = 45/80 (56%), Gaps = 1/80 (1%)
Frame = +3
Query: 144 NVYVKNFGEDFSDEMLKDMFEKYGRITSHKVMY-KDDGNSRGFGFVAFEDPDAAERACIE 320
+VYV N +++ L + F + G +++ +++ ++ G RGF FV F + AA+RA +
Sbjct: 5 SVYVGNAPFQTTEDDLGNYFSQAGNVSNVRIVCDRETGRPRGFAFVEFTEEAAAQRAVDQ 64
Query: 321 LNGKELVEGKPLYVGRAQKK 380
NG + G+ L V AQ +
Sbjct: 65 FNGVDF-NGRALRVNLAQNR 83
Score = 39.1 bits (87), Expect = 0.003
Identities = 20/65 (30%), Positives = 35/65 (53%), Gaps = 2/65 (3%)
Frame = +3
Query: 450 GVNLYVKNLDDTIDDERLRKEFAPFGTITSAKVML--EDGRSKGFGFVCFSSPEEATKAV 623
G ++YV N ++ L F+ G +++ +++ E GR +GF FV F+ A +AV
Sbjct: 3 GFSVYVGNAPFQTTEDDLGNYFSQAGNVSNVRIVCDRETGRPRGFAFVEFTEEAAAQRAV 62
Query: 624 TEMNG 638
+ NG
Sbjct: 63 DQFNG 67
>Z77669-6|CAB01243.2| 371|Caenorhabditis elegans Hypothetical
protein T07F10.3 protein.
Length = 371
Score = 43.6 bits (98), Expect = 1e-04
Identities = 27/98 (27%), Positives = 52/98 (53%), Gaps = 1/98 (1%)
Frame = +3
Query: 144 NVYVKNFGEDFSDEMLKDMFEKYGRITSHKVMYKDDGNSRGFGFVAFEDPDAAERACIEL 323
N++V + +D +D L +F+KY K+ DG+S+G GFV F + + A +E+
Sbjct: 157 NLHVSSVPDDMADAELYRIFDKYQSCRGAKMFRFVDGSSKGSGFVRFGNQTDQQMALVEM 216
Query: 324 NGKELVEGKPLYVGRAQKKAER-QKELKRKFEQLKSER 434
+ + V G + + A + ER + R+F+ +++R
Sbjct: 217 H-RTKVGGCRIILKLAGSRGERLDRGESRQFKSQRNDR 253
Score = 40.3 bits (90), Expect = 0.001
Identities = 40/171 (23%), Positives = 72/171 (42%), Gaps = 3/171 (1%)
Frame = +3
Query: 147 VYVKNFGEDFSDEMLKDMFEKYGRITSH--KVMYKDDGNSRGFGFVAFEDPDAAERACIE 320
+++ + D+++E L +F + G +V KD+ +G+ F+ F D A + +
Sbjct: 70 LWIGDVPTDWTEETLSQVFTECGHAPYKVKRVYVKDE--LKGYCFIEFITFDEARQTLYD 127
Query: 321 LNGKELVEGKPLYVGRAQKKAERQKELKRKFEQLKSERLTRYQGVNLYVKNLDDTIDDER 500
LNG + K + ++ NL+V ++ D + D
Sbjct: 128 LNGNRIPGFKDIRFNLC----------------FANDSYNPNSEFNLHVSSVPDDMADAE 171
Query: 501 LRKEFAPFGTITSAKVM-LEDGRSKGFGFVCFSSPEEATKAVTEMNGRIVG 650
L + F + + AK+ DG SKG GFV F + + A+ EM+ VG
Sbjct: 172 LYRIFDKYQSCRGAKMFRFVDGSSKGSGFVRFGNQTDQQMALVEMHRTKVG 222
>U39997-3|AAK68389.1| 498|Caenorhabditis elegans Human daz (deleted
in azoospermia)homolog protein 1 protein.
Length = 498
Score = 43.6 bits (98), Expect = 1e-04
Identities = 25/79 (31%), Positives = 43/79 (54%), Gaps = 1/79 (1%)
Frame = +3
Query: 147 VYVKNFGEDFSDEMLKDMFEKYGRITSHKVMYKDDGNSRGFGFVAFEDPDAAERACIELN 326
++V F ++ L++ FEK+ + K++ DG S+G+GF+ FE D AE +L
Sbjct: 68 IFVGGFPTSTTETELREHFEKFFAVKDVKMVKSLDGQSKGYGFITFETEDQAEE-IRKLT 126
Query: 327 GKEL-VEGKPLYVGRAQKK 380
K+L + L +G A +K
Sbjct: 127 PKQLEFRSRKLNLGPAIRK 145
Score = 35.1 bits (77), Expect = 0.044
Identities = 15/52 (28%), Positives = 29/52 (55%), Gaps = 1/52 (1%)
Frame = +3
Query: 459 LYVKNLDDTIDDERLRKEFAPFGTITSAKVMLE-DGRSKGFGFVCFSSPEEA 611
++V + + LR+ F F + K++ DG+SKG+GF+ F + ++A
Sbjct: 68 IFVGGFPTSTTETELREHFEKFFAVKDVKMVKSLDGQSKGYGFITFETEDQA 119
>AB025253-1|BAA88577.1| 499|Caenorhabditis elegans DAZ-1 protein.
Length = 499
Score = 43.6 bits (98), Expect = 1e-04
Identities = 25/79 (31%), Positives = 43/79 (54%), Gaps = 1/79 (1%)
Frame = +3
Query: 147 VYVKNFGEDFSDEMLKDMFEKYGRITSHKVMYKDDGNSRGFGFVAFEDPDAAERACIELN 326
++V F ++ L++ FEK+ + K++ DG S+G+GF+ FE D AE +L
Sbjct: 69 IFVGGFPTSTTETELREHFEKFFAVKDVKMVKSLDGQSKGYGFITFETEDQAEE-IRKLT 127
Query: 327 GKEL-VEGKPLYVGRAQKK 380
K+L + L +G A +K
Sbjct: 128 PKQLEFRSRKLNLGPAIRK 146
Score = 35.1 bits (77), Expect = 0.044
Identities = 15/52 (28%), Positives = 29/52 (55%), Gaps = 1/52 (1%)
Frame = +3
Query: 459 LYVKNLDDTIDDERLRKEFAPFGTITSAKVMLE-DGRSKGFGFVCFSSPEEA 611
++V + + LR+ F F + K++ DG+SKG+GF+ F + ++A
Sbjct: 69 IFVGGFPTSTTETELREHFEKFFAVKDVKMVKSLDGQSKGYGFITFETEDQA 120
>Z50044-2|CAA90354.1| 256|Caenorhabditis elegans Hypothetical
protein F22B5.2 protein.
Length = 256
Score = 42.7 bits (96), Expect = 2e-04
Identities = 23/59 (38%), Positives = 33/59 (55%), Gaps = 1/59 (1%)
Frame = +3
Query: 153 VKNFGEDFSDEMLKDMFEKYGRITSHKVMY-KDDGNSRGFGFVAFEDPDAAERACIELN 326
V N ++ +++ L+D+F K GR+ + K G +GF FV FE D A RA ELN
Sbjct: 180 VTNLPQEMNEDELRDLFGKIGRVIRIFIARDKVTGLPKGFAFVTFESRDDAARAIAELN 238
Score = 37.9 bits (84), Expect = 0.006
Identities = 19/59 (32%), Positives = 31/59 (52%), Gaps = 2/59 (3%)
Frame = +3
Query: 465 VKNLDDTIDDERLRKEFAPFGTITSAKVMLED--GRSKGFGFVCFSSPEEATKAVTEMN 635
V NL ++++ LR F G + + + G KGF FV F S ++A +A+ E+N
Sbjct: 180 VTNLPQEMNEDELRDLFGKIGRVIRIFIARDKVTGLPKGFAFVTFESRDDAARAIAELN 238
>U79157-1|AAC26982.1| 496|Caenorhabditis elegans splicing factor
U2AF65 protein.
Length = 496
Score = 42.7 bits (96), Expect = 2e-04
Identities = 41/183 (22%), Positives = 81/183 (44%), Gaps = 18/183 (9%)
Frame = +3
Query: 147 VYVKNFGEDFSDEMLKDMFEKYGRITSHKVMYKDDGNSRGFGFVAFEDPDAAERACIELN 326
+++ +++ +K++ +G + + + GNS+G+ F + DP ++A LN
Sbjct: 293 IFIGGLPNYLTEDQVKELLCSFGPLKAFSLNVDSQGNSKGYAFAEYLDPTLTDQAIAGLN 352
Query: 327 GKELVEGKPLYVGRAQKKAERQK-ELKRKFEQLKSERLTRYQG--------VNLYVKN-- 473
G +L + K L V A +R L + L++ G +N+ ++
Sbjct: 353 GMQLGD-KQLVVQLACANQQRHNTNLPNSASAIAGIDLSQGAGRATEILCLMNMVTEDEL 411
Query: 474 -LDDTIDD--ERLRKEFAPFGTITSAKV--MLEDGRSKGFG--FVCFSSPEEATKAVTEM 632
DD ++ E +R E + +G + S ++ ED G G FV F+S + +A +
Sbjct: 412 KADDEYEEILEDVRDECSKYGIVRSLEIPRPYEDHPVPGVGKVFVEFASTSDCQRAQAAL 471
Query: 633 NGR 641
GR
Sbjct: 472 TGR 474
Score = 31.5 bits (68), Expect = 0.54
Identities = 13/65 (20%), Positives = 35/65 (53%), Gaps = 1/65 (1%)
Frame = +3
Query: 459 LYVKNLDDTIDDERLRKEFAPFGTITSAKVMLED-GRSKGFGFVCFSSPEEATKAVTEMN 635
+++ L + + ++++++ FG + + + ++ G SKG+ F + P +A+ +N
Sbjct: 293 IFIGGLPNYLTEDQVKELLCSFGPLKAFSLNVDSQGNSKGYAFAEYLDPTLTDQAIAGLN 352
Query: 636 GRIVG 650
G +G
Sbjct: 353 GMQLG 357
>AC024875-3|AAK29989.1| 496|Caenorhabditis elegans U2af splicing
factor protein 1,isoform a protein.
Length = 496
Score = 42.7 bits (96), Expect = 2e-04
Identities = 41/183 (22%), Positives = 81/183 (44%), Gaps = 18/183 (9%)
Frame = +3
Query: 147 VYVKNFGEDFSDEMLKDMFEKYGRITSHKVMYKDDGNSRGFGFVAFEDPDAAERACIELN 326
+++ +++ +K++ +G + + + GNS+G+ F + DP ++A LN
Sbjct: 293 IFIGGLPNYLTEDQVKELLCSFGPLKAFSLNVDSQGNSKGYAFAEYLDPTLTDQAIAGLN 352
Query: 327 GKELVEGKPLYVGRAQKKAERQK-ELKRKFEQLKSERLTRYQG--------VNLYVKN-- 473
G +L + K L V A +R L + L++ G +N+ ++
Sbjct: 353 GMQLGD-KQLVVQLACANQQRHNTNLPNSASAIAGIDLSQGAGRATEILCLMNMVTEDEL 411
Query: 474 -LDDTIDD--ERLRKEFAPFGTITSAKV--MLEDGRSKGFG--FVCFSSPEEATKAVTEM 632
DD ++ E +R E + +G + S ++ ED G G FV F+S + +A +
Sbjct: 412 KADDEYEEILEDVRDECSKYGIVRSLEIPRPYEDHPVPGVGKVFVEFASTSDCQRAQAAL 471
Query: 633 NGR 641
GR
Sbjct: 472 TGR 474
Score = 31.5 bits (68), Expect = 0.54
Identities = 13/65 (20%), Positives = 35/65 (53%), Gaps = 1/65 (1%)
Frame = +3
Query: 459 LYVKNLDDTIDDERLRKEFAPFGTITSAKVMLED-GRSKGFGFVCFSSPEEATKAVTEMN 635
+++ L + + ++++++ FG + + + ++ G SKG+ F + P +A+ +N
Sbjct: 293 IFIGGLPNYLTEDQVKELLCSFGPLKAFSLNVDSQGNSKGYAFAEYLDPTLTDQAIAGLN 352
Query: 636 GRIVG 650
G +G
Sbjct: 353 GMQLG 357
>AC024875-2|AAM44400.1| 471|Caenorhabditis elegans U2af splicing
factor protein 1,isoform d protein.
Length = 471
Score = 42.7 bits (96), Expect = 2e-04
Identities = 41/183 (22%), Positives = 81/183 (44%), Gaps = 18/183 (9%)
Frame = +3
Query: 147 VYVKNFGEDFSDEMLKDMFEKYGRITSHKVMYKDDGNSRGFGFVAFEDPDAAERACIELN 326
+++ +++ +K++ +G + + + GNS+G+ F + DP ++A LN
Sbjct: 268 IFIGGLPNYLTEDQVKELLCSFGPLKAFSLNVDSQGNSKGYAFAEYLDPTLTDQAIAGLN 327
Query: 327 GKELVEGKPLYVGRAQKKAERQK-ELKRKFEQLKSERLTRYQG--------VNLYVKN-- 473
G +L + K L V A +R L + L++ G +N+ ++
Sbjct: 328 GMQLGD-KQLVVQLACANQQRHNTNLPNSASAIAGIDLSQGAGRATEILCLMNMVTEDEL 386
Query: 474 -LDDTIDD--ERLRKEFAPFGTITSAKV--MLEDGRSKGFG--FVCFSSPEEATKAVTEM 632
DD ++ E +R E + +G + S ++ ED G G FV F+S + +A +
Sbjct: 387 KADDEYEEILEDVRDECSKYGIVRSLEIPRPYEDHPVPGVGKVFVEFASTSDCQRAQAAL 446
Query: 633 NGR 641
GR
Sbjct: 447 TGR 449
Score = 31.5 bits (68), Expect = 0.54
Identities = 13/65 (20%), Positives = 35/65 (53%), Gaps = 1/65 (1%)
Frame = +3
Query: 459 LYVKNLDDTIDDERLRKEFAPFGTITSAKVMLED-GRSKGFGFVCFSSPEEATKAVTEMN 635
+++ L + + ++++++ FG + + + ++ G SKG+ F + P +A+ +N
Sbjct: 268 IFIGGLPNYLTEDQVKELLCSFGPLKAFSLNVDSQGNSKGYAFAEYLDPTLTDQAIAGLN 327
Query: 636 GRIVG 650
G +G
Sbjct: 328 GMQLG 332
>AC024875-1|AAL00879.1| 474|Caenorhabditis elegans U2af splicing
factor protein 1,isoform c protein.
Length = 474
Score = 42.7 bits (96), Expect = 2e-04
Identities = 41/183 (22%), Positives = 81/183 (44%), Gaps = 18/183 (9%)
Frame = +3
Query: 147 VYVKNFGEDFSDEMLKDMFEKYGRITSHKVMYKDDGNSRGFGFVAFEDPDAAERACIELN 326
+++ +++ +K++ +G + + + GNS+G+ F + DP ++A LN
Sbjct: 271 IFIGGLPNYLTEDQVKELLCSFGPLKAFSLNVDSQGNSKGYAFAEYLDPTLTDQAIAGLN 330
Query: 327 GKELVEGKPLYVGRAQKKAERQK-ELKRKFEQLKSERLTRYQG--------VNLYVKN-- 473
G +L + K L V A +R L + L++ G +N+ ++
Sbjct: 331 GMQLGD-KQLVVQLACANQQRHNTNLPNSASAIAGIDLSQGAGRATEILCLMNMVTEDEL 389
Query: 474 -LDDTIDD--ERLRKEFAPFGTITSAKV--MLEDGRSKGFG--FVCFSSPEEATKAVTEM 632
DD ++ E +R E + +G + S ++ ED G G FV F+S + +A +
Sbjct: 390 KADDEYEEILEDVRDECSKYGIVRSLEIPRPYEDHPVPGVGKVFVEFASTSDCQRAQAAL 449
Query: 633 NGR 641
GR
Sbjct: 450 TGR 452
Score = 31.5 bits (68), Expect = 0.54
Identities = 13/65 (20%), Positives = 35/65 (53%), Gaps = 1/65 (1%)
Frame = +3
Query: 459 LYVKNLDDTIDDERLRKEFAPFGTITSAKVMLED-GRSKGFGFVCFSSPEEATKAVTEMN 635
+++ L + + ++++++ FG + + + ++ G SKG+ F + P +A+ +N
Sbjct: 271 IFIGGLPNYLTEDQVKELLCSFGPLKAFSLNVDSQGNSKGYAFAEYLDPTLTDQAIAGLN 330
Query: 636 GRIVG 650
G +G
Sbjct: 331 GMQLG 335
>Z49910-5|CAA90120.1| 411|Caenorhabditis elegans Hypothetical
protein F44G4.4a protein.
Length = 411
Score = 42.3 bits (95), Expect = 3e-04
Identities = 45/172 (26%), Positives = 76/172 (44%), Gaps = 10/172 (5%)
Frame = +3
Query: 165 GEDF--SDEMLKDMFEKYGRITSHKVMYKDDGNSRGFGFVAFEDPDAAERACIELNGKEL 338
G DF +DE + FE G + ++ K DGNS+GFGFV E+ + + +
Sbjct: 179 GVDFKTTDECFQKYFEDIGTVVFCEIKRKSDGNSKGFGFVRMS--SVGEQNKVLAIPQHM 236
Query: 339 VEGKPLYVGRAQKKAERQKELKRKFEQLKSERLTRYQGVNLYVKNLDDTIDDERLRKEFA 518
++G+ R K ++ + + ++R ++V L D +D+ +LRK F
Sbjct: 237 IDGR-----RCDVKVPDGRDKQGR------PSISR-----IFVGRLTDKVDEHQLRKVFG 280
Query: 519 PFGTITSAKVMLED----GRSKGFGFVCFSSPEEATKAVTE----MNGRIVG 650
++ D +GF FV SS E A + V++ +NG VG
Sbjct: 281 DEAKSYIETAVVTDVFIPKPFRGFAFVTLSSAEAAERIVSKGSLTVNGLSVG 332
Score = 41.5 bits (93), Expect = 5e-04
Identities = 24/60 (40%), Positives = 32/60 (53%), Gaps = 1/60 (1%)
Frame = +3
Query: 447 QGVNLYVKNLDDTIDDERLRKEFAPFGTITSAKVMLE-DGRSKGFGFVCFSSPEEATKAV 623
Q V+L V +D DE +K F GT+ ++ + DG SKGFGFV SS E K +
Sbjct: 171 QPVDLIVLGVDFKTTDECFQKYFEDIGTVVFCEIKRKSDGNSKGFGFVRMSSVGEQNKVL 230
>Z75552-9|CAA99945.2| 705|Caenorhabditis elegans Hypothetical
protein W04D2.6a protein.
Length = 705
Score = 40.7 bits (91), Expect = 9e-04
Identities = 37/150 (24%), Positives = 69/150 (46%), Gaps = 2/150 (1%)
Frame = +3
Query: 63 GKMVYVGRFIPRKEREKELGEKAKLFTNVYVKNFGEDFSDEMLKDMFEKYGRITSHKVMY 242
G+M G+ P ++ ++ + + +F V N + SDE ++ + + G + S K +
Sbjct: 25 GQMRMPGQHTPAQQSSQQKPDSSPVF----VGNISDKCSDEFIRKILNECGNVASWKRIK 80
Query: 243 KDDGNSRGFGFVAFEDPDAAERACIELNGKELVEGKPLYVGRAQKKAE--RQKELKRKFE 416
+G +GFGF F D + RA L+ L + K L V +K + R+ ++ +
Sbjct: 81 GSNGKLQGFGFCHFTDLEGTLRALRILHEFHLGD-KKLTVKPDEKVRDDLRKNAIENRKR 139
Query: 417 QLKSERLTRYQGVNLYVKNLDDTIDDERLR 506
Q K E ++ + + DD DE +R
Sbjct: 140 QGKKELKLKHDEL---PADEDDLKKDEEIR 166
>Z75551-6|CAA99937.2| 705|Caenorhabditis elegans Hypothetical
protein W04D2.6a protein.
Length = 705
Score = 40.7 bits (91), Expect = 9e-04
Identities = 37/150 (24%), Positives = 69/150 (46%), Gaps = 2/150 (1%)
Frame = +3
Query: 63 GKMVYVGRFIPRKEREKELGEKAKLFTNVYVKNFGEDFSDEMLKDMFEKYGRITSHKVMY 242
G+M G+ P ++ ++ + + +F V N + SDE ++ + + G + S K +
Sbjct: 25 GQMRMPGQHTPAQQSSQQKPDSSPVF----VGNISDKCSDEFIRKILNECGNVASWKRIK 80
Query: 243 KDDGNSRGFGFVAFEDPDAAERACIELNGKELVEGKPLYVGRAQKKAE--RQKELKRKFE 416
+G +GFGF F D + RA L+ L + K L V +K + R+ ++ +
Sbjct: 81 GSNGKLQGFGFCHFTDLEGTLRALRILHEFHLGD-KKLTVKPDEKVRDDLRKNAIENRKR 139
Query: 417 QLKSERLTRYQGVNLYVKNLDDTIDDERLR 506
Q K E ++ + + DD DE +R
Sbjct: 140 QGKKELKLKHDEL---PADEDDLKKDEEIR 166
>AL132904-14|CAC35847.2| 258|Caenorhabditis elegans Hypothetical
protein Y111B2A.18 protein.
Length = 258
Score = 40.3 bits (90), Expect = 0.001
Identities = 27/72 (37%), Positives = 37/72 (51%)
Frame = +3
Query: 147 VYVKNFGEDFSDEMLKDMFEKYGRITSHKVMYKDDGNSRGFGFVAFEDPDAAERACIELN 326
VYV N D ++ ++D+F KYGRI K + G F FV FED AE A +
Sbjct: 11 VYVGNLPGDVREKEVEDIFHKYGRI---KYVDIKSGRGPAFAFVEFEDHRDAEDAVRARD 67
Query: 327 GKELVEGKPLYV 362
G E +G+ + V
Sbjct: 68 GYEF-DGRRIRV 78
>AF242767-1|AAG36874.1| 258|Caenorhabditis elegans SF2 protein.
Length = 258
Score = 40.3 bits (90), Expect = 0.001
Identities = 27/72 (37%), Positives = 37/72 (51%)
Frame = +3
Query: 147 VYVKNFGEDFSDEMLKDMFEKYGRITSHKVMYKDDGNSRGFGFVAFEDPDAAERACIELN 326
VYV N D ++ ++D+F KYGRI K + G F FV FED AE A +
Sbjct: 11 VYVGNLPGDVREKEVEDIFHKYGRI---KYVDIKSGRGPAFAFVEFEDHRDAEDAVRARD 67
Query: 327 GKELVEGKPLYV 362
G E +G+ + V
Sbjct: 68 GYEF-DGRRIRV 78
>U23484-3|AAK68298.1| 126|Caenorhabditis elegans Sr protein
(splicing factor) protein4, isoform b protein.
Length = 126
Score = 39.9 bits (89), Expect = 0.002
Identities = 28/79 (35%), Positives = 40/79 (50%), Gaps = 1/79 (1%)
Frame = +3
Query: 141 TNVYVKNFGEDFSDEMLKDMFEKYGRITS-HKVMYKDDGNSRGFGFVAFEDPDAAERACI 317
T++ + N + L+ FE+YG I H K S+GFGFV F + AE A
Sbjct: 19 TSLKIDNLSYQTTPNDLRRTFERYGDIGDVHIPRDKYSRQSKGFGFVRFYERRDAEHALD 78
Query: 318 ELNGKELVEGKPLYVGRAQ 374
+GK LV+G+ L V A+
Sbjct: 79 RTDGK-LVDGRELRVTLAK 96
Score = 33.5 bits (73), Expect = 0.13
Identities = 20/66 (30%), Positives = 32/66 (48%), Gaps = 2/66 (3%)
Frame = +3
Query: 456 NLYVKNLDDTIDDERLRKEFAPFGTITSAKVMLE--DGRSKGFGFVCFSSPEEATKAVTE 629
+L + NL LR+ F +G I + + +SKGFGFV F +A A+
Sbjct: 20 SLKIDNLSYQTTPNDLRRTFERYGDIGDVHIPRDKYSRQSKGFGFVRFYERRDAEHALDR 79
Query: 630 MNGRIV 647
+G++V
Sbjct: 80 TDGKLV 85
>U23484-2|AAC46767.1| 196|Caenorhabditis elegans Sr protein
(splicing factor) protein4, isoform a protein.
Length = 196
Score = 39.9 bits (89), Expect = 0.002
Identities = 28/79 (35%), Positives = 40/79 (50%), Gaps = 1/79 (1%)
Frame = +3
Query: 141 TNVYVKNFGEDFSDEMLKDMFEKYGRITS-HKVMYKDDGNSRGFGFVAFEDPDAAERACI 317
T++ + N + L+ FE+YG I H K S+GFGFV F + AE A
Sbjct: 19 TSLKIDNLSYQTTPNDLRRTFERYGDIGDVHIPRDKYSRQSKGFGFVRFYERRDAEHALD 78
Query: 318 ELNGKELVEGKPLYVGRAQ 374
+GK LV+G+ L V A+
Sbjct: 79 RTDGK-LVDGRELRVTLAK 96
Score = 33.5 bits (73), Expect = 0.13
Identities = 20/66 (30%), Positives = 32/66 (48%), Gaps = 2/66 (3%)
Frame = +3
Query: 456 NLYVKNLDDTIDDERLRKEFAPFGTITSAKVMLE--DGRSKGFGFVCFSSPEEATKAVTE 629
+L + NL LR+ F +G I + + +SKGFGFV F +A A+
Sbjct: 20 SLKIDNLSYQTTPNDLRRTFERYGDIGDVHIPRDKYSRQSKGFGFVRFYERRDAEHALDR 79
Query: 630 MNGRIV 647
+G++V
Sbjct: 80 TDGKLV 85
>U21320-5|AAA62536.2| 332|Caenorhabditis elegans Rnp (rrm rna
binding domain) containingprotein 7 protein.
Length = 332
Score = 39.9 bits (89), Expect = 0.002
Identities = 24/84 (28%), Positives = 42/84 (50%), Gaps = 4/84 (4%)
Frame = +3
Query: 138 FTNVYVKNFGEDFSDEMLKDMFEKYGRITSHKVMYKDDGNSRGFGFVAFEDPDAAERACI 317
+ ++V + S+ L+ FE YG+I +++ + G RG+ F+ + D A
Sbjct: 103 YRTLFVGRINYETSESKLRREFEAYGKIKKLTMVHDEAGKPRGYAFIEYSDKAEMHTAYK 162
Query: 318 ELNGKELVEGKPLYV----GRAQK 377
+ +G + V+GK L V GR QK
Sbjct: 163 KADGIK-VDGKRLVVDYERGRTQK 185
>AC084197-11|AAM44397.1| 305|Caenorhabditis elegans Homologous to
drosophila sqd (squid)protein protein 1, isoform a
protein.
Length = 305
Score = 39.5 bits (88), Expect = 0.002
Identities = 37/164 (22%), Positives = 68/164 (41%), Gaps = 3/164 (1%)
Frame = +3
Query: 147 VYVKNFGEDFSDEMLKDMFEKYGRITSHKVMY-KDDGNSRGFGFVAFEDPDAAERACIEL 323
++V + ++E L F +YG + +V Y + +G SRGF FV F + + A
Sbjct: 31 IFVGGISPEVNNEDLSSHFTQYGEVAQAQVKYDRTNGRSRGFAFVEFTTGEGCKLALAA- 89
Query: 324 NGKELVEGKPLYVGRAQKKAERQKELKRKFEQLKSERLTRYQGVNLYVKNLDDTIDDERL 503
++ ++GK + V K + +E K+ ++V L ++ L
Sbjct: 90 -REQTIKGKSVEV-----KPAKSRENKK-----------------VFVGGLPSDYSEQDL 126
Query: 504 RKEFAPFGTITSAKVMLEDGRS--KGFGFVCFSSPEEATKAVTE 629
R F FG + + + + F F+ F E A KA ++
Sbjct: 127 RSHFEQFGKVDDIEWPFDKQTKARRNFAFIVFEEEESADKASSQ 170
Score = 37.1 bits (82), Expect = 0.011
Identities = 17/63 (26%), Positives = 36/63 (57%), Gaps = 1/63 (1%)
Frame = +3
Query: 126 KAKLFTNVYVKNFGEDFSDEMLKDMFEKYGRITSHKVMY-KDDGNSRGFGFVAFEDPDAA 302
K++ V+V D+S++ L+ FE++G++ + + K R F F+ FE+ ++A
Sbjct: 105 KSRENKKVFVGGLPSDYSEQDLRSHFEQFGKVDDIEWPFDKQTKARRNFAFIVFEEEESA 164
Query: 303 ERA 311
++A
Sbjct: 165 DKA 167
Score = 36.3 bits (80), Expect = 0.019
Identities = 19/66 (28%), Positives = 34/66 (51%), Gaps = 2/66 (3%)
Frame = +3
Query: 459 LYVKNLDDTIDDERLRKEFAPFGTITSAKVMLE--DGRSKGFGFVCFSSPEEATKAVTEM 632
++V + +++E L F +G + A+V + +GRS+GF FV F++ E A+
Sbjct: 31 IFVGGISPEVNNEDLSSHFTQYGEVAQAQVKYDRTNGRSRGFAFVEFTTGEGCKLALAAR 90
Query: 633 NGRIVG 650
I G
Sbjct: 91 EQTIKG 96
>AC084197-10|AAY43984.1| 308|Caenorhabditis elegans Homologous to
drosophila sqd (squid)protein protein 1, isoform b
protein.
Length = 308
Score = 39.5 bits (88), Expect = 0.002
Identities = 37/164 (22%), Positives = 68/164 (41%), Gaps = 3/164 (1%)
Frame = +3
Query: 147 VYVKNFGEDFSDEMLKDMFEKYGRITSHKVMY-KDDGNSRGFGFVAFEDPDAAERACIEL 323
++V + ++E L F +YG + +V Y + +G SRGF FV F + + A
Sbjct: 31 IFVGGISPEVNNEDLSSHFTQYGEVAQAQVKYDRTNGRSRGFAFVEFTTGEGCKLALAA- 89
Query: 324 NGKELVEGKPLYVGRAQKKAERQKELKRKFEQLKSERLTRYQGVNLYVKNLDDTIDDERL 503
++ ++GK + V K + +E K+ ++V L ++ L
Sbjct: 90 -REQTIKGKSVEV-----KPAKSRENKK-----------------VFVGGLPSDYSEQDL 126
Query: 504 RKEFAPFGTITSAKVMLEDGRS--KGFGFVCFSSPEEATKAVTE 629
R F FG + + + + F F+ F E A KA ++
Sbjct: 127 RSHFEQFGKVDDIEWPFDKQTKARRNFAFIVFEEEESADKASSQ 170
Score = 37.1 bits (82), Expect = 0.011
Identities = 17/63 (26%), Positives = 36/63 (57%), Gaps = 1/63 (1%)
Frame = +3
Query: 126 KAKLFTNVYVKNFGEDFSDEMLKDMFEKYGRITSHKVMY-KDDGNSRGFGFVAFEDPDAA 302
K++ V+V D+S++ L+ FE++G++ + + K R F F+ FE+ ++A
Sbjct: 105 KSRENKKVFVGGLPSDYSEQDLRSHFEQFGKVDDIEWPFDKQTKARRNFAFIVFEEEESA 164
Query: 303 ERA 311
++A
Sbjct: 165 DKA 167
Score = 36.3 bits (80), Expect = 0.019
Identities = 19/66 (28%), Positives = 34/66 (51%), Gaps = 2/66 (3%)
Frame = +3
Query: 459 LYVKNLDDTIDDERLRKEFAPFGTITSAKVMLE--DGRSKGFGFVCFSSPEEATKAVTEM 632
++V + +++E L F +G + A+V + +GRS+GF FV F++ E A+
Sbjct: 31 IFVGGISPEVNNEDLSSHFTQYGEVAQAQVKYDRTNGRSRGFAFVEFTTGEGCKLALAAR 90
Query: 633 NGRIVG 650
I G
Sbjct: 91 EQTIKG 96
>Z92826-4|CAB07322.1| 309|Caenorhabditis elegans Hypothetical
protein C18D11.4 protein.
Length = 309
Score = 39.1 bits (87), Expect = 0.003
Identities = 24/68 (35%), Positives = 41/68 (60%), Gaps = 6/68 (8%)
Frame = +3
Query: 153 VKNFGEDFSDEMLKDMFEKYGRITSHKVMY-KDDGNSRGFGFVAF---EDPDAA-ERAC- 314
V N +++ L+D+F ++G I ++Y + GNSRGFGF+ F ED AA ++ C
Sbjct: 80 VFNLSSYTTEKDLRDVFGEFGEINKCDLVYDRPSGNSRGFGFIYFNLIEDATAARDKLCN 139
Query: 315 IELNGKEL 338
+L+G ++
Sbjct: 140 TDLDGHKI 147
Score = 37.1 bits (82), Expect = 0.011
Identities = 21/56 (37%), Positives = 30/56 (53%), Gaps = 2/56 (3%)
Frame = +3
Query: 459 LYVKNLDDTIDDERLRKEFAPFGTITSAKVMLE--DGRSKGFGFVCFSSPEEATKA 620
L V NL ++ LR F FG I ++ + G S+GFGF+ F+ E+AT A
Sbjct: 78 LGVFNLSSYTTEKDLRDVFGEFGEINKCDLVYDRPSGNSRGFGFIYFNLIEDATAA 133
>Z66521-4|CAD59160.1| 150|Caenorhabditis elegans Hypothetical
protein W02B12.3c protein.
Length = 150
Score = 39.1 bits (87), Expect = 0.003
Identities = 24/64 (37%), Positives = 35/64 (54%)
Frame = +3
Query: 147 VYVKNFGEDFSDEMLKDMFEKYGRITSHKVMYKDDGNSRGFGFVAFEDPDAAERACIELN 326
+Y+ S++ ++ F YG+I V+ K+ GFGFV F+D AE A +LN
Sbjct: 5 IYIGRLTSRVSEKDIEHFFRGYGQIRD--VLLKN-----GFGFVEFDDKRDAEDAVHDLN 57
Query: 327 GKEL 338
GKEL
Sbjct: 58 GKEL 61
Score = 32.7 bits (71), Expect = 0.23
Identities = 19/64 (29%), Positives = 34/64 (53%)
Frame = +3
Query: 459 LYVKNLDDTIDDERLRKEFAPFGTITSAKVMLEDGRSKGFGFVCFSSPEEATKAVTEMNG 638
+Y+ L + ++ + F +G I V+L++G FGFV F +A AV ++NG
Sbjct: 5 IYIGRLTSRVSEKDIEHFFRGYGQIRD--VLLKNG----FGFVEFDDKRDAEDAVHDLNG 58
Query: 639 RIVG 650
+ +G
Sbjct: 59 KELG 62
>Z66521-3|CAD59159.1| 148|Caenorhabditis elegans Hypothetical
protein W02B12.3b protein.
Length = 148
Score = 39.1 bits (87), Expect = 0.003
Identities = 24/64 (37%), Positives = 35/64 (54%)
Frame = +3
Query: 147 VYVKNFGEDFSDEMLKDMFEKYGRITSHKVMYKDDGNSRGFGFVAFEDPDAAERACIELN 326
+Y+ S++ ++ F YG+I V+ K+ GFGFV F+D AE A +LN
Sbjct: 5 IYIGRLTSRVSEKDIEHFFRGYGQIRD--VLLKN-----GFGFVEFDDKRDAEDAVHDLN 57
Query: 327 GKEL 338
GKEL
Sbjct: 58 GKEL 61
Score = 32.7 bits (71), Expect = 0.23
Identities = 19/64 (29%), Positives = 34/64 (53%)
Frame = +3
Query: 459 LYVKNLDDTIDDERLRKEFAPFGTITSAKVMLEDGRSKGFGFVCFSSPEEATKAVTEMNG 638
+Y+ L + ++ + F +G I V+L++G FGFV F +A AV ++NG
Sbjct: 5 IYIGRLTSRVSEKDIEHFFRGYGQIRD--VLLKNG----FGFVEFDDKRDAEDAVHDLNG 58
Query: 639 RIVG 650
+ +G
Sbjct: 59 KELG 62
>Z66521-2|CAA91395.1| 312|Caenorhabditis elegans Hypothetical
protein W02B12.3a protein.
Length = 312
Score = 39.1 bits (87), Expect = 0.003
Identities = 24/64 (37%), Positives = 35/64 (54%)
Frame = +3
Query: 147 VYVKNFGEDFSDEMLKDMFEKYGRITSHKVMYKDDGNSRGFGFVAFEDPDAAERACIELN 326
+Y+ S++ ++ F YG+I V+ K+ GFGFV F+D AE A +LN
Sbjct: 5 IYIGRLTSRVSEKDIEHFFRGYGQIRD--VLLKN-----GFGFVEFDDKRDAEDAVHDLN 57
Query: 327 GKEL 338
GKEL
Sbjct: 58 GKEL 61
Score = 32.7 bits (71), Expect = 0.23
Identities = 19/64 (29%), Positives = 34/64 (53%)
Frame = +3
Query: 459 LYVKNLDDTIDDERLRKEFAPFGTITSAKVMLEDGRSKGFGFVCFSSPEEATKAVTEMNG 638
+Y+ L + ++ + F +G I V+L++G FGFV F +A AV ++NG
Sbjct: 5 IYIGRLTSRVSEKDIEHFFRGYGQIRD--VLLKNG----FGFVEFDDKRDAEDAVHDLNG 58
Query: 639 RIVG 650
+ +G
Sbjct: 59 KELG 62
>AC024844-6|AAK29956.1| 442|Caenorhabditis elegans Hypothetical
protein Y65B4A.1 protein.
Length = 442
Score = 39.1 bits (87), Expect = 0.003
Identities = 37/135 (27%), Positives = 60/135 (44%), Gaps = 8/135 (5%)
Frame = +3
Query: 66 KMVYVGRFIPRKEREKELGEKAKLFTNVYVKNFGEDFSDEMLKDMFEKYGRITSH----- 230
K V +G KE +LG+K VYV N ED +DE + K G I
Sbjct: 157 KKVGLGAGEDAKEGWLDLGDKVHA---VYVSNLPEDITDEEFQKFMSKCGVIQPDIRTNK 213
Query: 231 ---KVMYKDDGNSRGFGFVAFEDPDAAERACIELNGKELVEGKPLYVGRAQKKAERQKEL 401
K+ +++G +G G + ++ E AC L+G L G+ + V A+ + + +
Sbjct: 214 PKCKLYREENGKLKGDGRCCYIKKESVELACNILDGANL-NGREVKVEEARFEMKGDFDP 272
Query: 402 KRKFEQLKSERLTRY 446
RK +L + + RY
Sbjct: 273 ARKRRKLTAAQKKRY 287
Score = 32.7 bits (71), Expect = 0.23
Identities = 34/108 (31%), Positives = 47/108 (43%), Gaps = 17/108 (15%)
Frame = +3
Query: 366 RAQKKAERQKELKRK-------FEQLKSERLTRYQGVN-LYVKNLDDTIDDERLRKEFAP 521
+AQK+ E +KE KRK E K L V+ +YV NL + I DE +K +
Sbjct: 142 KAQKEDEEKKEKKRKKKVGLGAGEDAKEGWLDLGDKVHAVYVSNLPEDITDEEFQKFMSK 201
Query: 522 FGTI------TSAKVML---EDGRSKGFGFVCFSSPEEATKAVTEMNG 638
G I K L E+G+ KG G C+ E A ++G
Sbjct: 202 CGVIQPDIRTNKPKCKLYREENGKLKGDGRCCYIKKESVELACNILDG 249
>Z69384-5|CAA93419.2| 408|Caenorhabditis elegans Hypothetical
protein T11G6.8 protein.
Length = 408
Score = 38.7 bits (86), Expect = 0.004
Identities = 25/87 (28%), Positives = 43/87 (49%), Gaps = 4/87 (4%)
Frame = +3
Query: 141 TNVYVKNFG----EDFSDEMLKDMFEKYGRITSHKVMYKDDGNSRGFGFVAFEDPDAAER 308
T +Y+ N G + +++ L D F +YG I +V+ +G F+ F +AAER
Sbjct: 235 TTLYIGNLGPSGAQQVTEKDLNDFFYQYGDIRCLRVL-----TEKGCAFIEFTTREAAER 289
Query: 309 ACIELNGKELVEGKPLYVGRAQKKAER 389
A K ++GK L + + +A+R
Sbjct: 290 AAERSFNKTFIKGKRLTIRWGEPQAKR 316
>Z66521-8|CAA91394.1| 281|Caenorhabditis elegans Hypothetical
protein W02B12.2 protein.
Length = 281
Score = 38.3 bits (85), Expect = 0.005
Identities = 24/64 (37%), Positives = 35/64 (54%)
Frame = +3
Query: 147 VYVKNFGEDFSDEMLKDMFEKYGRITSHKVMYKDDGNSRGFGFVAFEDPDAAERACIELN 326
VY+ SD ++ F YG+++ V+ K+ GFGFV F+D A+ A +LN
Sbjct: 4 VYIGRLPNRASDRDVEHFFRGYGKLSD--VIMKN-----GFGFVDFQDQRDADDAVHDLN 56
Query: 327 GKEL 338
GKEL
Sbjct: 57 GKEL 60
Score = 31.1 bits (67), Expect = 0.71
Identities = 18/63 (28%), Positives = 33/63 (52%)
Frame = +3
Query: 453 VNLYVKNLDDTIDDERLRKEFAPFGTITSAKVMLEDGRSKGFGFVCFSSPEEATKAVTEM 632
V +Y+ L + D + F +G ++ V++++G FGFV F +A AV ++
Sbjct: 2 VRVYIGRLPNRASDRDVEHFFRGYGKLSD--VIMKNG----FGFVDFQDQRDADDAVHDL 55
Query: 633 NGR 641
NG+
Sbjct: 56 NGK 58
>AL032626-17|CAA21536.1| 282|Caenorhabditis elegans Hypothetical
protein Y37D8A.21 protein.
Length = 282
Score = 37.1 bits (82), Expect = 0.011
Identities = 23/66 (34%), Positives = 38/66 (57%), Gaps = 2/66 (3%)
Frame = +3
Query: 147 VYVKNFGEDFSDEMLKDMFEKYGRITSHKVMYKD--DGNSRGFGFVAFEDPDAAERACIE 320
+YV NF E+ +E+L+++F + G + KV+ +D D N++ F V FED + A
Sbjct: 15 IYVANFSEEVDEELLEELFIQAGPVV--KVILRDVRDSNAK-FALVEFEDELSVLFAIEL 71
Query: 321 LNGKEL 338
+NG L
Sbjct: 72 MNGVRL 77
Score = 30.3 bits (65), Expect = 1.2
Identities = 20/62 (32%), Positives = 28/62 (45%), Gaps = 2/62 (3%)
Frame = +3
Query: 459 LYVKNLDDTIDDERLRKEFAPFGTITSAKVMLEDGRSKG--FGFVCFSSPEEATKAVTEM 632
+YV N + +D+E L + F G + KV+L D R F V F A+ M
Sbjct: 15 IYVANFSEEVDEELLEELFIQAGPV--VKVILRDVRDSNAKFALVEFEDELSVLFAIELM 72
Query: 633 NG 638
NG
Sbjct: 73 NG 74
>AF040642-5|AAN73870.2| 138|Caenorhabditis elegans Hypothetical
protein C50D2.5 protein.
Length = 138
Score = 36.7 bits (81), Expect = 0.014
Identities = 19/61 (31%), Positives = 33/61 (54%)
Frame = +3
Query: 147 VYVKNFGEDFSDEMLKDMFEKYGRITSHKVMYKDDGNSRGFGFVAFEDPDAAERACIELN 326
+Y+KN + E + ++F K+G + +V + +RG FV +ED A+ AC L+
Sbjct: 21 LYIKNLPYKITTEEMYEIFGKFGAVRQIRV--GNTAETRGTAFVVYEDIFDAKTACEHLS 78
Query: 327 G 329
G
Sbjct: 79 G 79
Score = 30.7 bits (66), Expect = 0.94
Identities = 17/60 (28%), Positives = 28/60 (46%)
Frame = +3
Query: 459 LYVKNLDDTIDDERLRKEFAPFGTITSAKVMLEDGRSKGFGFVCFSSPEEATKAVTEMNG 638
LY+KNL I E + + F FG + +V ++G FV + +A A ++G
Sbjct: 21 LYIKNLPYKITTEEMYEIFGKFGAVRQIRVG-NTAETRGTAFVVYEDIFDAKTACEHLSG 79
>Z81038-2|CAB02757.1| 454|Caenorhabditis elegans Hypothetical
protein C25A1.4 protein.
Length = 454
Score = 35.9 bits (79), Expect = 0.025
Identities = 18/62 (29%), Positives = 36/62 (58%), Gaps = 1/62 (1%)
Frame = +3
Query: 459 LYVKNLDDTIDDERLRKEFAPFGTITSAKVMLE-DGRSKGFGFVCFSSPEEATKAVTEMN 635
+++ NL + ++L + F G IT ++ +G+SKG + ++ P EA +AV+ +N
Sbjct: 190 IFIANLAFNVGTDKLYEVFGMAGKITWMDFRIDKEGKSKGVCVIQYTHPIEAVQAVSMLN 249
Query: 636 GR 641
G+
Sbjct: 250 GQ 251
Score = 31.9 bits (69), Expect = 0.41
Identities = 17/70 (24%), Positives = 32/70 (45%)
Frame = +3
Query: 135 LFTNVYVKNFGEDFSDEMLKDMFEKYGRITSHKVMYKDDGNSRGFGFVAFEDPDAAERAC 314
L +++ N + + L ++F G+IT +G S+G + + P A +A
Sbjct: 186 LCERIFIANLAFNVGTDKLYEVFGMAGKITWMDFRIDKEGKSKGVCVIQYTHPIEAVQAV 245
Query: 315 IELNGKELVE 344
LNG+ L +
Sbjct: 246 SMLNGQRLFD 255
>U80455-3|AAO38606.1| 145|Caenorhabditis elegans Elav-type rna
binding protein familyprotein 1, isoform c protein.
Length = 145
Score = 35.9 bits (79), Expect = 0.025
Identities = 20/46 (43%), Positives = 25/46 (54%), Gaps = 2/46 (4%)
Frame = +3
Query: 450 GVNLYVKNLDDTIDDERLRKEFAPFGTITSAKVMLE--DGRSKGFG 581
G NL++ +L D L FAPFG I SAKV ++ SK FG
Sbjct: 75 GANLFIYHLPQDFGDSDLINTFAPFGGILSAKVFIDKVTNLSKCFG 120
>U23450-2|AAK31468.1| 302|Caenorhabditis elegans Hypothetical
protein C30B5.4 protein.
Length = 302
Score = 35.5 bits (78), Expect = 0.033
Identities = 21/87 (24%), Positives = 38/87 (43%), Gaps = 2/87 (2%)
Frame = +3
Query: 384 ERQKELKRKFEQLKSERLTRYQGVNLYVKNLDDTIDDERLRKEFAPFGTITSAKVMLED- 560
ER+ L + KS T +Y+ L + + + F+ +G + + ++ +
Sbjct: 15 ERELSLGYAGDLKKSWHQTYKDSAWIYIGGLSYALSEGDVIAVFSQYGEVMNINLIRDKD 74
Query: 561 -GRSKGFGFVCFSSPEEATKAVTEMNG 638
G+SKGF F+C+ AV NG
Sbjct: 75 TGKSKGFAFLCYKDQRSTILAVDNFNG 101
Score = 33.1 bits (72), Expect = 0.18
Identities = 17/65 (26%), Positives = 32/65 (49%), Gaps = 1/65 (1%)
Frame = +3
Query: 147 VYVKNFGEDFSDEMLKDMFEKYGRITS-HKVMYKDDGNSRGFGFVAFEDPDAAERACIEL 323
+Y+ S+ + +F +YG + + + + KD G S+GF F+ ++D + A
Sbjct: 40 IYIGGLSYALSEGDVIAVFSQYGEVMNINLIRDKDTGKSKGFAFLCYKDQRSTILAVDNF 99
Query: 324 NGKEL 338
NG L
Sbjct: 100 NGISL 104
>AC006833-6|AAF60950.1| 491|Caenorhabditis elegans Hypothetical
protein ZK616.1 protein.
Length = 491
Score = 35.5 bits (78), Expect = 0.033
Identities = 25/93 (26%), Positives = 46/93 (49%)
Frame = +3
Query: 141 TNVYVKNFGEDFSDEMLKDMFEKYGRITSHKVMYKDDGNSRGFGFVAFEDPDAAERACIE 320
+NV+V+ D D ++++ +G IT V + G+GFV F+ A++ +E
Sbjct: 96 SNVFVRGISRDMPDT---ELYQAFGGITDGVVQCHV---ADGYGFVLFDTRANAQKKIVE 149
Query: 321 LNGKELVEGKPLYVGRAQKKAERQKELKRKFEQ 419
++GK L GK + V A+ +K + E+
Sbjct: 150 MDGKTL-NGKLISVSWARPDTVGRKRKRPMSEE 181
Score = 32.7 bits (71), Expect = 0.23
Identities = 19/62 (30%), Positives = 31/62 (50%)
Frame = +3
Query: 456 NLYVKNLDDTIDDERLRKEFAPFGTITSAKVMLEDGRSKGFGFVCFSSPEEATKAVTEMN 635
N++V+ + + D L + FG IT V + G+GFV F + A K + EM+
Sbjct: 97 NVFVRGISRDMPDTEL---YQAFGGITDGVVQCHV--ADGYGFVLFDTRANAQKKIVEMD 151
Query: 636 GR 641
G+
Sbjct: 152 GK 153
>Z81120-1|CAB03342.1| 207|Caenorhabditis elegans Hypothetical
protein T12D8.2 protein.
Length = 207
Score = 34.3 bits (75), Expect = 0.076
Identities = 19/59 (32%), Positives = 30/59 (50%)
Frame = +3
Query: 204 EKYGRITSHKVMYKDDGNSRGFGFVAFEDPDAAERACIELNGKELVEGKPLYVGRAQKK 380
E+ + H V +D G+ +GF +V FE+ A LNG + + L V RAQ++
Sbjct: 34 EELKKFDIHLVHDRDSGSFKGFAYVTFENEQQMNTAISGLNGADF-GNRVLKVNRAQQR 91
>U41007-10|AAL32214.1| 118|Caenorhabditis elegans Sr protein
(splicing factor) protein6, isoform c protein.
Length = 118
Score = 33.9 bits (74), Expect = 0.10
Identities = 20/64 (31%), Positives = 33/64 (51%)
Frame = +3
Query: 147 VYVKNFGEDFSDEMLKDMFEKYGRITSHKVMYKDDGNSRGFGFVAFEDPDAAERACIELN 326
VYV D + + L+++F+++GRI V + GF FV ++D AE A L+
Sbjct: 5 VYVGGLPSDATSQELEEIFDRFGRIRKVWVARRPP----GFAFVEYDDVRDAEDAVRALD 60
Query: 327 GKEL 338
G +
Sbjct: 61 GSRI 64
>U41007-9|AAL32213.1| 153|Caenorhabditis elegans Sr protein
(splicing factor) protein6, isoform b protein.
Length = 153
Score = 33.9 bits (74), Expect = 0.10
Identities = 20/64 (31%), Positives = 33/64 (51%)
Frame = +3
Query: 147 VYVKNFGEDFSDEMLKDMFEKYGRITSHKVMYKDDGNSRGFGFVAFEDPDAAERACIELN 326
VYV D + + L+++F+++GRI V + GF FV ++D AE A L+
Sbjct: 5 VYVGGLPSDATSQELEEIFDRFGRIRKVWVARRPP----GFAFVEYDDVRDAEDAVRALD 60
Query: 327 GKEL 338
G +
Sbjct: 61 GSRI 64
>U41007-8|AAA82270.1| 179|Caenorhabditis elegans Sr protein
(splicing factor) protein6, isoform a protein.
Length = 179
Score = 33.9 bits (74), Expect = 0.10
Identities = 20/64 (31%), Positives = 33/64 (51%)
Frame = +3
Query: 147 VYVKNFGEDFSDEMLKDMFEKYGRITSHKVMYKDDGNSRGFGFVAFEDPDAAERACIELN 326
VYV D + + L+++F+++GRI V + GF FV ++D AE A L+
Sbjct: 5 VYVGGLPSDATSQELEEIFDRFGRIRKVWVARRPP----GFAFVEYDDVRDAEDAVRALD 60
Query: 327 GKEL 338
G +
Sbjct: 61 GSRI 64
>AL117204-23|CAB55137.1| 285|Caenorhabditis elegans Hypothetical
protein Y116A8C.35 protein.
Length = 285
Score = 33.1 bits (72), Expect = 0.18
Identities = 19/68 (27%), Positives = 34/68 (50%)
Frame = +3
Query: 156 KNFGEDFSDEMLKDMFEKYGRITSHKVMYKDDGNSRGFGFVAFEDPDAAERACIELNGKE 335
+ + +DF +E+ +M KYG + V + G +V F + AE+A +LN +
Sbjct: 84 QRYFDDFYEEVFVEMERKYGEVEEINVCENIGEHMVGNVYVKFMKEEDAEKAKNDLNNR- 142
Query: 336 LVEGKPLY 359
G+P+Y
Sbjct: 143 WFNGQPIY 150
>U28738-11|AAK68399.3| 166|Caenorhabditis elegans Sr protein
(splicing factor) protein5, isoform b protein.
Length = 166
Score = 32.3 bits (70), Expect = 0.31
Identities = 20/49 (40%), Positives = 27/49 (55%)
Frame = +3
Query: 210 YGRITSHKVMYKDDGNSRGFGFVAFEDPDAAERACIELNGKELVEGKPL 356
YG+I + + Y GF FV FED AE AC +L+GK + EG +
Sbjct: 25 YGKINNISMKY-------GFAFVDFEDSRDAEDACHDLDGKTM-EGSSM 65
>U28738-10|AAK72066.3| 208|Caenorhabditis elegans Sr protein
(splicing factor) protein5, isoform d protein.
Length = 208
Score = 32.3 bits (70), Expect = 0.31
Identities = 20/49 (40%), Positives = 27/49 (55%)
Frame = +3
Query: 210 YGRITSHKVMYKDDGNSRGFGFVAFEDPDAAERACIELNGKELVEGKPL 356
YG+I + + Y GF FV FED AE AC +L+GK + EG +
Sbjct: 25 YGKINNISMKY-------GFAFVDFEDSRDAEDACHDLDGKTM-EGSSM 65
>U28738-9|AAA68314.3| 208|Caenorhabditis elegans Sr protein
(splicing factor) protein5, isoform a protein.
Length = 208
Score = 32.3 bits (70), Expect = 0.31
Identities = 20/49 (40%), Positives = 27/49 (55%)
Frame = +3
Query: 210 YGRITSHKVMYKDDGNSRGFGFVAFEDPDAAERACIELNGKELVEGKPL 356
YG+I + + Y GF FV FED AE AC +L+GK + EG +
Sbjct: 25 YGKINNISMKY-------GFAFVDFEDSRDAEDACHDLDGKTM-EGSSM 65
>U23172-15|AAN63408.1| 374|Caenorhabditis elegans Hypothetical
protein F25B5.7d protein.
Length = 374
Score = 31.5 bits (68), Expect = 0.54
Identities = 18/63 (28%), Positives = 31/63 (49%)
Frame = +3
Query: 459 LYVKNLDDTIDDERLRKEFAPFGTITSAKVMLEDGRSKGFGFVCFSSPEEATKAVTEMNG 638
L+V NL + + + L++ F+P G I + KGF F+ + A A ++G
Sbjct: 118 LFVGNLPNEVKETELKELFSPHGDIAECYLS-----GKGFAFLRLDTRAHAESAKEAIDG 172
Query: 639 RIV 647
RI+
Sbjct: 173 RII 175
>U23172-12|ABH03526.1| 562|Caenorhabditis elegans Hypothetical
protein F25B5.7a protein.
Length = 562
Score = 31.5 bits (68), Expect = 0.54
Identities = 18/63 (28%), Positives = 31/63 (49%)
Frame = +3
Query: 459 LYVKNLDDTIDDERLRKEFAPFGTITSAKVMLEDGRSKGFGFVCFSSPEEATKAVTEMNG 638
L+V NL + + + L++ F+P G I + KGF F+ + A A ++G
Sbjct: 118 LFVGNLPNEVKETELKELFSPHGDIAECYLS-----GKGFAFLRLDTRAHAESAKEAIDG 172
Query: 639 RIV 647
RI+
Sbjct: 173 RII 175
>EF523767-1|ABS18833.1| 193|Caenorhabditis elegans ELAV-type RNA
binding protein variantB protein.
Length = 193
Score = 31.5 bits (68), Expect = 0.54
Identities = 12/40 (30%), Positives = 23/40 (57%)
Frame = +3
Query: 147 VYVKNFGEDFSDEMLKDMFEKYGRITSHKVMYKDDGNSRG 266
+++ + ++E L+++F K+G I V+ DG SRG
Sbjct: 144 LFIGQLSKKHNEENLREIFAKFGHIEDCSVLRDQDGKSRG 183
>AF125462-4|AAD12859.1| 1219|Caenorhabditis elegans Heavy chain,
unconventional myosinprotein 8, isoform a protein.
Length = 1219
Score = 31.5 bits (68), Expect = 0.54
Identities = 18/39 (46%), Positives = 26/39 (66%)
Frame = +3
Query: 303 ERACIELNGKELVEGKPLYVGRAQKKAERQKELKRKFEQ 419
E A IE +E E + L + A+K+AERQ+E+KRK E+
Sbjct: 945 ELAEIERKRRESEEKERLEI-EAKKEAERQREIKRKLEE 982
>Z49910-7|CAA90124.4| 384|Caenorhabditis elegans Hypothetical
protein F44G4.1 protein.
Length = 384
Score = 31.1 bits (67), Expect = 0.71
Identities = 31/129 (24%), Positives = 53/129 (41%), Gaps = 1/129 (0%)
Frame = +3
Query: 171 DFSDEMLKDMFEKYGRITSHKVMYKDDGNSRGFGFVAFEDPDAAERACIELNGKELVEGK 350
+ +DE L+++ EKY + KDD F + A + + K +G+
Sbjct: 66 ELTDEKLQELLEKYEASKATATKTKDD-----FKHLPKSQRGKALKRALR-KDKRARQGE 119
Query: 351 PLYVGRAQKKAERQKELKRKFEQLKSERLTRYQGVNLYVKNLDDTIDDERLRKEFAP-FG 527
+ ++ QKE+ + E ++ T V DD ++ + EFAP F
Sbjct: 120 RAQIRDELGESAPQKEVPKTIESMREYDAT-------MVNEEDDEVEHDEANDEFAPYFN 172
Query: 528 TITSAKVML 554
TS KVM+
Sbjct: 173 RETSPKVMI 181
>U00052-10|AAK21429.2| 289|Caenorhabditis elegans Rnp (rrm rna
binding domain) containingprotein 5 protein.
Length = 289
Score = 31.1 bits (67), Expect = 0.71
Identities = 23/95 (24%), Positives = 46/95 (48%), Gaps = 2/95 (2%)
Frame = +3
Query: 84 RFIPRKEREKELGEKAKLFTNVYVKNFGEDFSDEMLKDMFEKYGRITSHKVMYKDDGNS- 260
R PR+ AK V +KN + L+++F YG I + + N
Sbjct: 117 RASPRRSPAARSASPAK---RVVIKNLSRNVLKTHLEEIFSIYGAIKNVDLPPDRFHNHV 173
Query: 261 -RGFGFVAFEDPDAAERACIELNGKELVEGKPLYV 362
RG+G+V +++ + AE++ ++G + ++G ++V
Sbjct: 174 HRGYGYVEYDNLEDAEKSIKHMDGGQ-IDGMAVHV 207
Score = 29.1 bits (62), Expect = 2.9
Identities = 15/61 (24%), Positives = 32/61 (52%), Gaps = 3/61 (4%)
Frame = +3
Query: 465 VKNLDDTIDDERLRKEFAPFGTITSAKV---MLEDGRSKGFGFVCFSSPEEATKAVTEMN 635
+KNL + L + F+ +G I + + + +G+G+V + + E+A K++ M+
Sbjct: 137 IKNLSRNVLKTHLEEIFSIYGAIKNVDLPPDRFHNHVHRGYGYVEYDNLEDAEKSIKHMD 196
Query: 636 G 638
G
Sbjct: 197 G 197
>U28944-8|AAK68193.1| 103|Caenorhabditis elegans Hypothetical
protein C18A3.5c protein.
Length = 103
Score = 30.7 bits (66), Expect = 0.94
Identities = 12/34 (35%), Positives = 21/34 (61%)
Frame = +3
Query: 459 LYVKNLDDTIDDERLRKEFAPFGTITSAKVMLED 560
LYV NLD T+ ++ + F G++T KV+ ++
Sbjct: 48 LYVGNLDSTVTEDFIATLFNQIGSVTKTKVIFDE 81
>U64859-3|AAC69093.2| 447|Caenorhabditis elegans Innexin protein 5
protein.
Length = 447
Score = 30.3 bits (65), Expect = 1.2
Identities = 17/60 (28%), Positives = 28/60 (46%)
Frame = +3
Query: 81 GRFIPRKEREKELGEKAKLFTNVYVKNFGEDFSDEMLKDMFEKYGRITSHKVMYKDDGNS 260
G F+P +K L + + +N G+ F+ ML +MF Y + K KDD ++
Sbjct: 336 GSFVPANFVDKCLTPDGVFISRLVQQNSGDLFTSIMLGEMFSLYRAREAEKAHKKDDDSA 395
>AF098993-1|AAC67471.2| 367|Caenorhabditis elegans Zinc finger
transcription factorfamily protein 4 protein.
Length = 367
Score = 29.9 bits (64), Expect = 1.6
Identities = 11/23 (47%), Positives = 16/23 (69%)
Frame = +3
Query: 261 RGFGFVAFEDPDAAERACIELNG 329
+GFGFV F + +A+ +C LNG
Sbjct: 119 QGFGFVQFNEAGSADESCRSLNG 141
>Z35637-3|CAA84689.1| 244|Caenorhabditis elegans Hypothetical
protein C03C10.4 protein.
Length = 244
Score = 28.7 bits (61), Expect = 3.8
Identities = 19/71 (26%), Positives = 29/71 (40%), Gaps = 2/71 (2%)
Frame = +3
Query: 294 DAAERACIELNGKELVEGKPLYVGR--AQKKAERQKELKRKFEQLKSERLTRYQGVNLYV 467
+ A R C+E NG + + +P Y + + Q EL E ER Y +
Sbjct: 157 EMALRKCLEENGSAIKKSRPYYERKEVLTRTMNSQLELMSILEHEVQERKDSYSDSMRAL 216
Query: 468 KNLDDTIDDER 500
+ + D I ER
Sbjct: 217 EQISDQIHQER 227
>AF106582-4|AAC78219.1| 456|Caenorhabditis elegans Hypothetical
protein W05F2.6 protein.
Length = 456
Score = 28.7 bits (61), Expect = 3.8
Identities = 20/88 (22%), Positives = 37/88 (42%)
Frame = +3
Query: 87 FIPRKEREKELGEKAKLFTNVYVKNFGEDFSDEMLKDMFEKYGRITSHKVMYKDDGNSRG 266
++ ++ EK + KLF D+S E L++ +++ +++Y GN+
Sbjct: 355 YMRTRDAEKHKNSEVKLFVEKL-----PDWSTEQLEEKLRNEFKLSDFQLLYDYKGNNLR 409
Query: 267 FGFVAFEDPDAAERACIELNGKELVEGK 350
V + PDA C + V GK
Sbjct: 410 SAIVLLKYPDAI-NLCNSIRSNPTVFGK 436
>AF040648-3|AAL06034.2| 453|Caenorhabditis elegans Hypothetical
protein H19M22.3c protein.
Length = 453
Score = 28.7 bits (61), Expect = 3.8
Identities = 16/45 (35%), Positives = 23/45 (51%)
Frame = +3
Query: 60 NGKMVYVGRFIPRKEREKELGEKAKLFTNVYVKNFGEDFSDEMLK 194
+GK + V R I E +KE EK L + + +F E+F E K
Sbjct: 409 SGKSIAVRRLIRHAEHQKERSEKGPLDPDYFDDDFFENFFMEYSK 453
>AF040648-1|AAK21412.1| 519|Caenorhabditis elegans Hypothetical
protein H19M22.3a protein.
Length = 519
Score = 28.7 bits (61), Expect = 3.8
Identities = 16/45 (35%), Positives = 23/45 (51%)
Frame = +3
Query: 60 NGKMVYVGRFIPRKEREKELGEKAKLFTNVYVKNFGEDFSDEMLK 194
+GK + V R I E +KE EK L + + +F E+F E K
Sbjct: 475 SGKSIAVRRLIRHAEHQKERSEKGPLDPDYFDDDFFENFFMEYSK 519
>AB007816-1|BAA28352.1| 394|Caenorhabditis elegans matrix
metalloproteinase protein.
Length = 394
Score = 28.7 bits (61), Expect = 3.8
Identities = 16/45 (35%), Positives = 23/45 (51%)
Frame = +3
Query: 60 NGKMVYVGRFIPRKEREKELGEKAKLFTNVYVKNFGEDFSDEMLK 194
+GK + V R I E +KE EK L + + +F E+F E K
Sbjct: 350 SGKSIAVRRLIRHAEHQKERSEKGPLDPDYFDDDFFENFFMEYSK 394
>AF068711-1|AAC17775.2| 1121|Caenorhabditis elegans Hypothetical
protein R09A1.1 protein.
Length = 1121
Score = 28.3 bits (60), Expect = 5.0
Identities = 15/55 (27%), Positives = 28/55 (50%), Gaps = 3/55 (5%)
Frame = +3
Query: 171 DFS---DEMLKDMFEKYGRITSHKVMYKDDGNSRGFGFVAFEDPDAAERACIELN 326
DFS DE + + + G+ +H V+Y+D + F FE+ E C++++
Sbjct: 902 DFSKEIDERIGEFIDHTGKRPAHIVVYRDGLSEGDFQKYLFEERVCIEERCLKID 956
>AF016422-6|AAY86271.1| 128|Caenorhabditis elegans Hypothetical
protein R09E12.9 protein.
Length = 128
Score = 28.3 bits (60), Expect = 5.0
Identities = 12/41 (29%), Positives = 23/41 (56%)
Frame = +3
Query: 177 SDEMLKDMFEKYGRITSHKVMYKDDGNSRGFGFVAFEDPDA 299
++ +LK FEKYG++ +V + +G G + +D +A
Sbjct: 9 AEALLKPQFEKYGKLVDDEVWAEVEGYYHPNGVLVHKDKEA 49
>Z77654-1|CAB01127.1| 114|Caenorhabditis elegans Hypothetical
protein C50B8.1 protein.
Length = 114
Score = 27.9 bits (59), Expect = 6.6
Identities = 15/62 (24%), Positives = 29/62 (46%), Gaps = 2/62 (3%)
Frame = +3
Query: 450 GVNLYVKNLDDTIDDERLRKEFAPFGTITSAKVMLED--GRSKGFGFVCFSSPEEATKAV 623
G +Y+ ++ +L F +G+I S + + G +GF + F S + A KA+
Sbjct: 24 GQTVYLTHVKWVTGKSQLEHYFKRYGSIQSVNMFYDPDTGLHRGFASITFDSKDGANKAI 83
Query: 624 TE 629
+
Sbjct: 84 EQ 85
>U97010-1|AAB52322.1| 334|Caenorhabditis elegans Hypothetical
protein W08A12.4 protein.
Length = 334
Score = 27.9 bits (59), Expect = 6.6
Identities = 24/111 (21%), Positives = 50/111 (45%), Gaps = 1/111 (0%)
Frame = +3
Query: 96 RKEREKELGEKAKLFTNVYVKN-FGEDFSDEMLKDMFEKYGRITSHKVMYKDDGNSRGFG 272
RK RE EL + F N + D + + ++ + ++K+ +K++ R
Sbjct: 86 RKNREDELAIETMKFENSQRNTEVYSPYLDSLKEKSLKQDEQFRNNKIRFKNEEMDRTLK 145
Query: 273 FVAFEDPDAAERACIELNGKELVEGKPLYVGRAQKKAERQKELKRKFEQLK 425
+ ++ R I+ E E K + ++ +RQ+E+ R+FE++K
Sbjct: 146 YQQAQEEHTLRRQKID----EEFEEKCQKLN--EEAQQRQREMNRQFEEIK 190
>U39653-1|AAM69065.2| 2471|Caenorhabditis elegans Hypothetical protein
T13H2.5a protein.
Length = 2471
Score = 27.9 bits (59), Expect = 6.6
Identities = 15/27 (55%), Positives = 19/27 (70%), Gaps = 1/27 (3%)
Frame = +3
Query: 366 RAQKKAERQKEL-KRKFEQLKSERLTR 443
RAQ+KA+ QKEL R+ EQ + E L R
Sbjct: 1257 RAQQKAQTQKELAARQAEQARVEELAR 1283
>AC006663-2|AAF39900.2| 603|Caenorhabditis elegans Hypothetical
protein H24K24.4 protein.
Length = 603
Score = 27.9 bits (59), Expect = 6.6
Identities = 16/61 (26%), Positives = 31/61 (50%), Gaps = 1/61 (1%)
Frame = +3
Query: 459 LYVKNLDDTIDDERLRKEFAPF-GTITSAKVMLEDGRSKGFGFVCFSSPEEATKAVTEMN 635
+++KN+ I ++ +K G + S KV + +V F +PE+A KA+ ++
Sbjct: 29 IHIKNIPTFIGFKQFKKVLEKILGDVKSKKVR----HMSDYAYVTFETPEDAQKAINLVD 84
Query: 636 G 638
G
Sbjct: 85 G 85
>Z77132-4|CAB00862.3| 536|Caenorhabditis elegans Hypothetical
protein F54D1.4 protein.
Length = 536
Score = 27.5 bits (58), Expect = 8.7
Identities = 16/37 (43%), Positives = 22/37 (59%), Gaps = 1/37 (2%)
Frame = -3
Query: 349 LPSTSSLPFNSMQALSAASGSSKATKPK-PLELPSSL 242
+PSTSS P NS S +S ++ PK PLE+ S+
Sbjct: 447 MPSTSSYPANSSPFQSPYRPNSLSSFPKIPLEMTKSI 483
>Z75711-3|CAB00035.3| 1204|Caenorhabditis elegans Hypothetical
protein K02B12.5 protein.
Length = 1204
Score = 27.5 bits (58), Expect = 8.7
Identities = 20/81 (24%), Positives = 35/81 (43%), Gaps = 1/81 (1%)
Frame = +3
Query: 408 KFEQLKSERLTRYQGVNLYVKNLDDTIDDERLRKEFAPFGTITSA-KVMLEDGRSKGFGF 584
+F++ + L YQG+ L +LD+ + K T A + + D R FG
Sbjct: 351 RFKRNDEDALRAYQGMALVYSDLDEHSKSLEMFKNLLELLMKTGATEEKILDTRVSIFGC 410
Query: 585 VCFSSPEEATKAVTEMNGRIV 647
+C + E+NG+I+
Sbjct: 411 MCKLDFTDLEPMFNELNGKIL 431
>Z73906-2|CAA98115.1| 586|Caenorhabditis elegans Hypothetical
protein D2030.2a protein.
Length = 586
Score = 27.5 bits (58), Expect = 8.7
Identities = 15/47 (31%), Positives = 23/47 (48%)
Frame = -3
Query: 340 TSSLPFNSMQALSAASGSSKATKPKPLELPSSLYITL*LVMRPYFSN 200
T++ P ++Q+ SK KP P PS+ YI + YF+N
Sbjct: 61 TNAPPNKAVQSFGQCRHCSKPLKPLPTLTPSNRYIHCDSCNKLYFAN 107
>Z70750-1|CAA94736.2| 362|Caenorhabditis elegans Hypothetical
protein C50F4.1 protein.
Length = 362
Score = 27.5 bits (58), Expect = 8.7
Identities = 13/45 (28%), Positives = 27/45 (60%)
Frame = +3
Query: 123 EKAKLFTNVYVKNFGEDFSDEMLKDMFEKYGRITSHKVMYKDDGN 257
EK + T+ Y++++ ++ +DE K +GR+T+ + +DGN
Sbjct: 190 EKVGILTH-YLEDWKDEDADEKEKHNVIAHGRLTAEICRFDEDGN 233
>U55857-6|AAA98032.2| 206|Caenorhabditis elegans Rnp (rrm rna
binding domain) containingprotein 2 protein.
Length = 206
Score = 27.5 bits (58), Expect = 8.7
Identities = 20/64 (31%), Positives = 29/64 (45%), Gaps = 4/64 (6%)
Frame = +3
Query: 459 LYVKNLDDTIDDERLRKE----FAPFGTITSAKVMLEDGRSKGFGFVCFSSPEEATKAVT 626
LY+ NL++ I + LRK F FG I S + + +G V F A+ A
Sbjct: 10 LYINNLNEKIKIDELRKSLVAVFKQFGEIVSV-MCFRTLKMRGQAHVIFKELPAASAARE 68
Query: 627 EMNG 638
+NG
Sbjct: 69 ALNG 72
>U32305-18|AAK18852.2| 719|Caenorhabditis elegans Hypothetical
protein B0336.3 protein.
Length = 719
Score = 27.5 bits (58), Expect = 8.7
Identities = 30/124 (24%), Positives = 53/124 (42%), Gaps = 1/124 (0%)
Frame = +3
Query: 126 KAKLFTNVYVKNFGEDFSDEMLKDMFEKYGRITSHKVMYKDDG-NSRGFGFVAFEDPDAA 302
++K+ + V V+ ++ +++ M EK+G + H V DDG + F F D A
Sbjct: 606 QSKMSSVVIVRGVTDELVTDLMAHM-EKFGEVFDHSVKADDDGLITAVFPFRKTGDALKA 664
Query: 303 ERACIELNGKELVEGKPLYVGRAQKKAERQKELKRKFEQLKSERLTRYQGVNLYVKNLDD 482
LNG +L + K ER +E+ + +++L NL DD
Sbjct: 665 MADGKVLNGVDL---------EMELKTERIEEIPSTDTNMSADQLLAAIPSNLESDEEDD 715
Query: 483 TIDD 494
++D
Sbjct: 716 LLND 719
>AF083225-1|AAD03683.1| 536|Caenorhabditis elegans nuclear receptor
NHR-7 protein.
Length = 536
Score = 27.5 bits (58), Expect = 8.7
Identities = 16/37 (43%), Positives = 22/37 (59%), Gaps = 1/37 (2%)
Frame = -3
Query: 349 LPSTSSLPFNSMQALSAASGSSKATKPK-PLELPSSL 242
+PSTSS P NS S +S ++ PK PLE+ S+
Sbjct: 447 MPSTSSYPANSSPFQSPYRPNSLSSFPKIPLEMTKSI 483
>AF040657-1|AAB95054.1| 758|Caenorhabditis elegans Hypothetical
protein T20H9.6 protein.
Length = 758
Score = 27.5 bits (58), Expect = 8.7
Identities = 14/33 (42%), Positives = 18/33 (54%)
Frame = +3
Query: 450 GVNLYVKNLDDTIDDERLRKEFAPFGTITSAKV 548
G++L TID E L EF FGT T A++
Sbjct: 81 GIHLRHGITKGTIDSEELISEFLNFGTTTPAQI 113
>AF016449-13|AAG24003.1| 350|Caenorhabditis elegans Serpentine
receptor, class t protein8 protein.
Length = 350
Score = 27.5 bits (58), Expect = 8.7
Identities = 11/60 (18%), Positives = 31/60 (51%)
Frame = -2
Query: 332 FAIQFNASSFSSIWVFKSNKTKASRIAIIFVHNFVTCNATIFLKHIF*HFIRKVFSKVLY 153
+ + F +SIW++K+ + + ++ V + + C F+K+++ + S++L+
Sbjct: 219 YHLLFKFGYSTSIWLYKTRRQIIFQALMLCVFHGIVCGIYEFMKYVYFSHTLVILSQLLW 278
>AC006757-3|AAF60541.2| 916|Caenorhabditis elegans Hypothetical
protein Y40C7B.1 protein.
Length = 916
Score = 27.5 bits (58), Expect = 8.7
Identities = 15/47 (31%), Positives = 26/47 (55%)
Frame = +3
Query: 372 QKKAERQKELKRKFEQLKSERLTRYQGVNLYVKNLDDTIDDERLRKE 512
Q+ ER+K++ FE+ K E+L R + L+ KN + E+ +E
Sbjct: 256 QQNQEREKQINDDFEKRKLEKLQREK---LFEKNKQAKLQREKAHQE 299
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,980,432
Number of Sequences: 27780
Number of extensions: 256947
Number of successful extensions: 1362
Number of sequences better than 10.0: 128
Number of HSP's better than 10.0 without gapping: 1052
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1246
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1444744186
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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