Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fe100P05_F_K16
         (651 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ435328-1|ABD92643.1|  143|Apis mellifera OBP11 protein.              26   0.36 
AB264313-1|BAF43600.1|  900|Apis mellifera ecdysone-induced prot...    25   0.84 
AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precurso...    23   3.4  
AY569717-1|AAS86670.1|  397|Apis mellifera complementary sex det...    21   7.8  
AY569712-1|AAS86665.1|  408|Apis mellifera complementary sex det...    21   7.8  
AJ973401-1|CAJ01448.1|  130|Apis mellifera hypothetical protein ...    21   7.8  

>DQ435328-1|ABD92643.1|  143|Apis mellifera OBP11 protein.
          Length = 143

 Score = 25.8 bits (54), Expect = 0.36
 Identities = 22/80 (27%), Positives = 35/80 (43%)
 Frame = +3

Query: 84  RFIPRKEREKELGEKAKLFTNVYVKNFGEDFSDEMLKDMFEKYGRITSHKVMYKDDGNSR 263
           R +  K R+K +GE      +V    +GE   DE LK  F     +    VM K +G  R
Sbjct: 33  REMTSKYRKKCIGETKTTIEDVEATEYGEFPEDEKLKCYFNCV--LEKFNVMDKKNGKIR 90

Query: 264 GFGFVAFEDPDAAERACIEL 323
            +  +    P+A +   +E+
Sbjct: 91  -YNLLKKVIPEAFKEIGVEM 109


>AB264313-1|BAF43600.1|  900|Apis mellifera ecdysone-induced protein
           75 protein.
          Length = 900

 Score = 24.6 bits (51), Expect = 0.84
 Identities = 11/22 (50%), Positives = 16/22 (72%)
 Frame = -3

Query: 328 PFNSMQALSAASGSSKATKPKP 263
           P +S + LSAA+ SS +T P+P
Sbjct: 823 PASSPRYLSAAATSSTSTSPRP 844


>AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precursor
           protein.
          Length = 1770

 Score = 22.6 bits (46), Expect = 3.4
 Identities = 12/36 (33%), Positives = 18/36 (50%)
 Frame = -3

Query: 433 RSDFSCSNLRFNSF*RSAFFCARPT*RGLPSTSSLP 326
           R+D S S+   +S   + F+  +PT    P  S LP
Sbjct: 368 RTDISSSSSSISSSEENDFWQPKPTLEDAPQNSLLP 403


>AY569717-1|AAS86670.1|  397|Apis mellifera complementary sex
           determiner protein.
          Length = 397

 Score = 21.4 bits (43), Expect = 7.8
 Identities = 11/37 (29%), Positives = 17/37 (45%)
 Frame = +3

Query: 81  GRFIPRKEREKELGEKAKLFTNVYVKNFGEDFSDEML 191
           GR   R ERE+    K     N   KN+  +++ + L
Sbjct: 287 GRSRDRTERERSKETKIISSNNYNYKNYNNNYNSKKL 323


>AY569712-1|AAS86665.1|  408|Apis mellifera complementary sex
           determiner protein.
          Length = 408

 Score = 21.4 bits (43), Expect = 7.8
 Identities = 11/37 (29%), Positives = 17/37 (45%)
 Frame = +3

Query: 81  GRFIPRKEREKELGEKAKLFTNVYVKNFGEDFSDEML 191
           GR   R ERE+    K     N   KN+  +++ + L
Sbjct: 298 GRSRDRTERERSKETKIISSNNYNYKNYNNNYNSKKL 334


>AJ973401-1|CAJ01448.1|  130|Apis mellifera hypothetical protein
           protein.
          Length = 130

 Score = 21.4 bits (43), Expect = 7.8
 Identities = 13/39 (33%), Positives = 19/39 (48%)
 Frame = +3

Query: 303 ERACIELNGKELVEGKPLYVGRAQKKAERQKELKRKFEQ 419
           +R  I+   K LVE KP        K +  K+ + KFE+
Sbjct: 83  QREVIKKVIKFLVENKPELWDSLANKYDPDKKFRVKFEE 121


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 153,213
Number of Sequences: 438
Number of extensions: 2964
Number of successful extensions: 8
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 19682733
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)