BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fe100P05_F_K12
(651 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPBC409.07c |wis1|spc2, smf2|MAP kinase kinase Wis1|Schizosaccha... 76 4e-15
SPAC1D4.13 |byr1|ste1, ste3|MAP kinase kinase Byr1|Schizosacchar... 41 2e-04
SPBC543.07 |pek1|skh1, mkk1|MAP kinase kinase Pek1 |Schizosaccha... 40 3e-04
SPBC19C2.05 |ran1|pat1|serine/threonine protein kinase Ran1|Schi... 39 7e-04
SPBC1604.14c |shk1|pak1, orb2|PAK-related kinase Shk1|Schizosacc... 33 0.036
SPBC11B10.09 |cdc2|swo2|cyclin-dependent protein kinase Cdc2|Sch... 33 0.047
SPAC9G1.09 |sid1||PAK-related kinase Sid1|Schizosaccharomyces po... 32 0.062
SPBC119.08 |pmk1|spm1|MAP kinase Pmk1 |Schizosaccharomyces pombe... 32 0.062
SPCC417.06c |ppk35|mug27|serine/threonine protein kinase Ppk35|S... 32 0.083
SPAC31G5.09c |spk1||MAP kinase Spk1|Schizosaccharomyces pombe|ch... 30 0.33
SPAC821.12 |orb6||serine/threonine protein kinase Orb6|Schizosac... 29 0.58
SPAC24B11.11c |sid2||Sid2p-Mob1p kinase complex|Schizosaccharomy... 29 0.77
SPAC222.07c |hri2||eIF2 alpha kinase Hri2|Schizosaccharomyces po... 29 0.77
SPAC1071.06 |arp9||SWI/SNF and RSC complex subunit Arp9|Schizosa... 27 1.8
SPAC1687.15 |gsk3|skp1|serine/threonine protein kinase Gsk3|Schi... 27 2.3
SPAC3H1.13 |ppk13||serine/threonine protein kinase Ppk13 |Schizo... 27 3.1
SPAC2F3.15 |lsk1||latrunculin sensitive kinase Lsk1 |Schizosacch... 27 3.1
SPAC823.03 |ppk15||serine/threonine protein kinase Ppk15 |Schizo... 27 3.1
SPBC29A3.08 |pof4||elongin-A, F-box protein Pof4|Schizosaccharom... 26 4.1
SPBC18H10.15 |ppk23||serine/threonine protein kinase Ppk23|Schiz... 25 7.2
SPAC22E12.14c |sck2||serine/threonine protein kinase Sck2|Schizo... 25 7.2
SPAC3H1.04c |mdm31||mitochondrial inner membrane protein Mdm31|S... 25 7.2
SPBC36B7.09 |gcn2|ppk28, ppk28, SPBP18G5.01|eIF2 alpha kinase Gc... 25 7.2
SPBC15D4.11c |||sequence orphan|Schizosaccharomyces pombe|chr 2|... 25 9.5
SPAC25B8.16 |||RNase P and RNase MRP subunit |Schizosaccharomyce... 25 9.5
SPBC2D10.17 |clr1||cryptic loci regulator Clr1|Schizosaccharomyc... 25 9.5
SPAC20G4.03c |hri1||eIF2 alpha kinase Hri1|Schizosaccharomyces p... 25 9.5
SPAC11H11.04 |mam2||pheromone p-factor receptor|Schizosaccharomy... 25 9.5
>SPBC409.07c |wis1|spc2, smf2|MAP kinase kinase
Wis1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 605
Score = 76.2 bits (179), Expect = 4e-15
Identities = 35/90 (38%), Positives = 56/90 (62%)
Frame = +1
Query: 382 TFTVHADDLVKICDLGRGAYGIVEKMRHLPSNTIMAVKRITATFNNQSLEQKRLLMDLDV 561
+F ++ +++K+ +LG+G YG+V K H P+ MA+K I + + Q ++M+LD+
Sbjct: 312 SFRINMSEIIKLEELGKGNYGVVYKALHQPTGVTMALKEIRLSLEEATFNQ--IIMELDI 369
Query: 562 SMRASACPYTVHFYGAMFREGDVWICMEVM 651
+ + PY V FYGA F EG V+ICME M
Sbjct: 370 -LHKAVSPYIVDFYGAFFVEGSVFICMEYM 398
>SPAC1D4.13 |byr1|ste1, ste3|MAP kinase kinase
Byr1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 340
Score = 40.7 bits (91), Expect = 2e-04
Identities = 28/76 (36%), Positives = 39/76 (51%)
Frame = +1
Query: 424 LGRGAYGIVEKMRHLPSNTIMAVKRITATFNNQSLEQKRLLMDLDVSMRASACPYTVHFY 603
LG G G V ++H N MA K T + S QK++L +L V + PY V FY
Sbjct: 72 LGEGNGGAVSLVKH--RNIFMARK--TVYVGSDSKLQKQILRELGV-LHHCRSPYIVGFY 126
Query: 604 GAMFREGDVWICMEVM 651
GA + ++ +CME M
Sbjct: 127 GAFQYKNNISLCMEYM 142
>SPBC543.07 |pek1|skh1, mkk1|MAP kinase kinase Pek1
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 363
Score = 39.9 bits (89), Expect = 3e-04
Identities = 24/68 (35%), Positives = 35/68 (51%)
Frame = +1
Query: 424 LGRGAYGIVEKMRHLPSNTIMAVKRITATFNNQSLEQKRLLMDLDVSMRASACPYTVHFY 603
LG G G V K R + I A+K + A N QK+LL +L ++ R+ PY V +Y
Sbjct: 85 LGEGVSGSVRKCRIRGTQMIFAMKTVLAAPNTAL--QKQLLRELKIN-RSCTSPYIVKYY 141
Query: 604 GAMFREGD 627
GA + +
Sbjct: 142 GACYNNAE 149
>SPBC19C2.05 |ran1|pat1|serine/threonine protein kinase
Ran1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 470
Score = 38.7 bits (86), Expect = 7e-04
Identities = 22/85 (25%), Positives = 42/85 (49%)
Frame = +1
Query: 391 VHADDLVKICDLGRGAYGIVEKMRHLPSNTIMAVKRITATFNNQSLEQKRLLMDLDVSMR 570
V D L + +G GAYG+V K + T+ AVK + N+ ++K +L + R
Sbjct: 13 VLGDSLRFVSIIGAGAYGVVYKAEDIYDGTLYAVKALCKDGLNEK-QKKLQARELALHAR 71
Query: 571 ASACPYTVHFYGAMFREGDVWICME 645
S+ PY + + + E +++ ++
Sbjct: 72 VSSHPYIITLHRVLETEDAIYVVLQ 96
>SPBC1604.14c |shk1|pak1, orb2|PAK-related kinase
Shk1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 658
Score = 33.1 bits (72), Expect = 0.036
Identities = 20/76 (26%), Positives = 40/76 (52%)
Frame = +1
Query: 424 LGRGAYGIVEKMRHLPSNTIMAVKRITATFNNQSLEQKRLLMDLDVSMRASACPYTVHFY 603
+G+GA G V R + +N +A+K++ N Q +K +++ + M++ V+F
Sbjct: 392 IGQGASGDVYSARQVGTNLSVAIKKM--NINQQ--PKKEFIVNEILVMKSHHHKNIVNFI 447
Query: 604 GAMFREGDVWICMEVM 651
F + ++W+ ME M
Sbjct: 448 DTFFYKSELWMVMEYM 463
>SPBC11B10.09 |cdc2|swo2|cyclin-dependent protein kinase
Cdc2|Schizosaccharomyces pombe|chr 2|||Manual
Length = 297
Score = 32.7 bits (71), Expect = 0.047
Identities = 14/30 (46%), Positives = 20/30 (66%)
Frame = +1
Query: 412 KICDLGRGAYGIVEKMRHLPSNTIMAVKRI 501
K+ +G G YG+V K RH S I+A+K+I
Sbjct: 6 KVEKIGEGTYGVVYKARHKLSGRIVAMKKI 35
>SPAC9G1.09 |sid1||PAK-related kinase Sid1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 471
Score = 32.3 bits (70), Expect = 0.062
Identities = 22/90 (24%), Positives = 42/90 (46%), Gaps = 1/90 (1%)
Frame = +1
Query: 385 FTVHADDLVKICDLGRGAYGIVEKMRHLPSNTIMAVKRITATFNNQSLEQKRLLMDLDVS 564
+ ++A+ + LG G++G+V K R S I+A+K+I + ++ +V
Sbjct: 2 YPLNANSYTLLRKLGSGSFGVVWKARENVSGDIIAIKQIDLETGIDDITD----IEQEVF 57
Query: 565 MRASA-CPYTVHFYGAMFREGDVWICMEVM 651
M ++ + +YG +WI ME M
Sbjct: 58 MLSNCNSSNVIQYYGCFVDGYTLWILMEHM 87
>SPBC119.08 |pmk1|spm1|MAP kinase Pmk1 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 422
Score = 32.3 bits (70), Expect = 0.062
Identities = 19/47 (40%), Positives = 31/47 (65%), Gaps = 2/47 (4%)
Frame = +1
Query: 421 DLGRGAYGIVEKMRHLPS--NTIMAVKRITATFNNQSLEQKRLLMDL 555
+LG+GAYGIV R++ S +A+K+IT F ++S+ KR L ++
Sbjct: 26 ELGQGAYGIVCAARNVASKDQEAVAIKKITNVF-SKSILTKRALREI 71
>SPCC417.06c |ppk35|mug27|serine/threonine protein kinase
Ppk35|Schizosaccharomyces pombe|chr 3|||Manual
Length = 624
Score = 31.9 bits (69), Expect = 0.083
Identities = 24/84 (28%), Positives = 42/84 (50%)
Frame = +1
Query: 394 HADDLVKICDLGRGAYGIVEKMRHLPSNTIMAVKRITATFNNQSLEQKRLLMDLDVSMRA 573
H D LVK LG+G YG V + ++ ++A+K + + Q E K +L + D+
Sbjct: 161 HFDLLVK---LGQGGYGSVWLAKKRNTHELLAMKMMKKSTLQQLNEVKHILNERDILTNT 217
Query: 574 SACPYTVHFYGAMFREGDVWICME 645
++ + V Y A + V++ ME
Sbjct: 218 NS-EWLVKLYYAFQDKEKVYLAME 240
>SPAC31G5.09c |spk1||MAP kinase Spk1|Schizosaccharomyces pombe|chr
1|||Manual
Length = 372
Score = 29.9 bits (64), Expect = 0.33
Identities = 13/26 (50%), Positives = 18/26 (69%)
Frame = +1
Query: 424 LGRGAYGIVEKMRHLPSNTIMAVKRI 501
+G+GAYG+V H PS +AVK+I
Sbjct: 45 IGQGAYGVVCAALHKPSGLKVAVKKI 70
>SPAC821.12 |orb6||serine/threonine protein kinase
Orb6|Schizosaccharomyces pombe|chr 1|||Manual
Length = 469
Score = 29.1 bits (62), Expect = 0.58
Identities = 24/86 (27%), Positives = 39/86 (45%), Gaps = 2/86 (2%)
Frame = +1
Query: 400 DDLVKICDLGRGAYGIVEKMRHLPSNTIMAVKRI--TATFNNQSLEQKRLLMDLDVSMRA 573
+D I +G+GA+G V ++ L + I A+K + T F L + DL V
Sbjct: 91 EDFSTIKVIGKGAFGEVRLVQKLDTGKIYAMKSLLKTEMFKRDQLAHVKAERDLLVE--- 147
Query: 574 SACPYTVHFYGAMFREGDVWICMEVM 651
S P+ V Y A +++ ME +
Sbjct: 148 SDSPWVVSLYYAFQDSLYLYLIMEFL 173
>SPAC24B11.11c |sid2||Sid2p-Mob1p kinase complex|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 607
Score = 28.7 bits (61), Expect = 0.77
Identities = 22/89 (24%), Positives = 42/89 (47%)
Frame = +1
Query: 379 RTFTVHADDLVKICDLGRGAYGIVEKMRHLPSNTIMAVKRITATFNNQSLEQKRLLMDLD 558
RT H D I +G+G YG V R + I+A+K + + ++ E + +L + D
Sbjct: 200 RTRISHGD-FQTITQVGQGGYGSVWLARKRDTKEIVALKIMNKSVLHKMDEIRHVLTERD 258
Query: 559 VSMRASACPYTVHFYGAMFREGDVWICME 645
+ A++ + V A ++++ ME
Sbjct: 259 ILTTANS-EWLVRLLYAFQDTSNIYLAME 286
>SPAC222.07c |hri2||eIF2 alpha kinase Hri2|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 639
Score = 28.7 bits (61), Expect = 0.77
Identities = 14/44 (31%), Positives = 23/44 (52%)
Frame = +1
Query: 394 HADDLVKICDLGRGAYGIVEKMRHLPSNTIMAVKRITATFNNQS 525
+ +D + LGRG +G V +R+ A+K+I +TF S
Sbjct: 167 YIEDFEEYSLLGRGGFGSVYHVRNKIDGAEYAMKKINSTFQQMS 210
>SPAC1071.06 |arp9||SWI/SNF and RSC complex subunit
Arp9|Schizosaccharomyces pombe|chr 1|||Manual
Length = 523
Score = 27.5 bits (58), Expect = 1.8
Identities = 20/68 (29%), Positives = 29/68 (42%), Gaps = 1/68 (1%)
Frame = +1
Query: 340 GNLDKQTTITVDDRTFTVHADDLVKICDLGRGAYGIVEKMRHLPSN-TIMAVKRITATFN 516
G +K D F A + + C +GR + I E + H PSN T+ + I T
Sbjct: 326 GESEKDEKPDNTDVEFQTIAIEPLGDCIVGRERFKICEPIFHRPSNETVSLPEAIYITIK 385
Query: 517 NQSLEQKR 540
N + KR
Sbjct: 386 NYAANYKR 393
>SPAC1687.15 |gsk3|skp1|serine/threonine protein kinase
Gsk3|Schizosaccharomyces pombe|chr 1|||Manual
Length = 387
Score = 27.1 bits (57), Expect = 2.3
Identities = 12/43 (27%), Positives = 27/43 (62%), Gaps = 2/43 (4%)
Frame = +1
Query: 424 LGRGAYGIVEKMRHLPSNTIMAVKRI--TATFNNQSLEQKRLL 546
+G G++G+V ++ + S++ A+KR+ F N+ L+ R++
Sbjct: 38 VGSGSFGVVMQVHLIESDSKAAIKRVLQDKRFKNRELQIMRIM 80
>SPAC3H1.13 |ppk13||serine/threonine protein kinase Ppk13
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 344
Score = 26.6 bits (56), Expect = 3.1
Identities = 9/37 (24%), Positives = 23/37 (62%)
Frame = +1
Query: 424 LGRGAYGIVEKMRHLPSNTIMAVKRITATFNNQSLEQ 534
LG G + V ++++ + + A+K+I +F N+ +++
Sbjct: 38 LGEGGFAFVYLVQNVSNEKLYALKKIKCSFGNKGIKK 74
>SPAC2F3.15 |lsk1||latrunculin sensitive kinase Lsk1
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 593
Score = 26.6 bits (56), Expect = 3.1
Identities = 14/40 (35%), Positives = 21/40 (52%)
Frame = +1
Query: 382 TFTVHADDLVKICDLGRGAYGIVEKMRHLPSNTIMAVKRI 501
T+T KI +G G YG V K + + ++A+KRI
Sbjct: 269 TYTYPKPAYEKIDQIGEGTYGKVYKAINTVTGDLVALKRI 308
>SPAC823.03 |ppk15||serine/threonine protein kinase Ppk15
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 534
Score = 26.6 bits (56), Expect = 3.1
Identities = 21/105 (20%), Positives = 44/105 (41%), Gaps = 2/105 (1%)
Frame = +1
Query: 343 NLDKQTTITVDDRTFTVHADDLVKICDLGRGAYGIVEKMRHLPSNTIMAVKRI--TATFN 516
N++ + V+D T + + LG G +G V + + L + I+A+K I F
Sbjct: 109 NVNHDYVLYVNDLLGTDEGRKYLILDTLGHGTFGQVARCQDLKTQQIVAIKVIKNKPAFY 168
Query: 517 NQSLEQKRLLMDLDVSMRASACPYTVHFYGAMFREGDVWICMEVM 651
NQ + + +L L+ + + Y + + + E++
Sbjct: 169 NQCVMEVSILELLNNKYDPEDKRHLIRLYDQFMHKNHLCLVFELL 213
>SPBC29A3.08 |pof4||elongin-A, F-box protein
Pof4|Schizosaccharomyces pombe|chr 2|||Manual
Length = 199
Score = 26.2 bits (55), Expect = 4.1
Identities = 18/52 (34%), Positives = 26/52 (50%)
Frame = +1
Query: 430 RGAYGIVEKMRHLPSNTIMAVKRITATFNNQSLEQKRLLMDLDVSMRASACP 585
RG YG ++K R+ N A R T QS + KR ++ L+ RA+ P
Sbjct: 85 RGLYGKLKKKRNAHYNVASAKLRSAYTKLEQSKQNKR-IVPLEREPRAARPP 135
>SPBC18H10.15 |ppk23||serine/threonine protein kinase
Ppk23|Schizosaccharomyces pombe|chr 2|||Manual
Length = 398
Score = 25.4 bits (53), Expect = 7.2
Identities = 12/34 (35%), Positives = 21/34 (61%)
Frame = +1
Query: 400 DDLVKICDLGRGAYGIVEKMRHLPSNTIMAVKRI 501
DD + + G+YGIV + +NT++A+K+I
Sbjct: 72 DDYEILEKIEEGSYGIVYRGLDKSTNTLVALKKI 105
>SPAC22E12.14c |sck2||serine/threonine protein kinase
Sck2|Schizosaccharomyces pombe|chr 1|||Manual
Length = 646
Score = 25.4 bits (53), Expect = 7.2
Identities = 18/86 (20%), Positives = 40/86 (46%), Gaps = 2/86 (2%)
Frame = +1
Query: 400 DDLVKICDLGRGAYGIVEKMRHLPSNTIMAVKRITATFNNQSLEQKRLLMDLDVSMRASA 579
DD V + +G+G +G V +R + + A+K ++ + E + + D+ ++ SA
Sbjct: 264 DDFVPLKLIGKGTFGQVYLVRKKDTERVYAMKVLSKKVIVRRKEVAHTVGERDILVQTSA 323
Query: 580 C--PYTVHFYGAMFREGDVWICMEVM 651
P+ V + D+++ + M
Sbjct: 324 ADSPFIVALRFSFQTPKDLYLVTDYM 349
>SPAC3H1.04c |mdm31||mitochondrial inner membrane protein
Mdm31|Schizosaccharomyces pombe|chr 1|||Manual
Length = 601
Score = 25.4 bits (53), Expect = 7.2
Identities = 16/29 (55%), Positives = 18/29 (62%), Gaps = 2/29 (6%)
Frame = +3
Query: 99 IIAYINALCTFII*LC--NS*LSYNHGSW 179
IIAYIN+ TFI LC + LS GSW
Sbjct: 507 IIAYINSTRTFIPILCHVSKPLSDFDGSW 535
>SPBC36B7.09 |gcn2|ppk28, ppk28, SPBP18G5.01|eIF2 alpha kinase Gcn2
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1576
Score = 25.4 bits (53), Expect = 7.2
Identities = 16/62 (25%), Positives = 33/62 (53%)
Frame = +1
Query: 424 LGRGAYGIVEKMRHLPSNTIMAVKRITATFNNQSLEQKRLLMDLDVSMRASACPYTVHFY 603
LGRG +G V K+++ AVK++ +++ E R+L ++ +++ + V +Y
Sbjct: 562 LGRGGFGEVVKVKNRIDGRFYAVKKLVLLSDDK--ENSRILREV-MTLSRLHHEHVVRYY 618
Query: 604 GA 609
A
Sbjct: 619 TA 620
>SPBC15D4.11c |||sequence orphan|Schizosaccharomyces pombe|chr
2|||Manual
Length = 263
Score = 25.0 bits (52), Expect = 9.5
Identities = 13/47 (27%), Positives = 25/47 (53%)
Frame = -3
Query: 247 VLTSQLSVLLNNRIKYPSKRFDNQDPWL*LSHELHNYMINVHNALIY 107
+LT QL++ L++ + Y + D P LH+++I+ +L Y
Sbjct: 39 ILTEQLALKLDSELGYVKQVLDETLPKKGYEKALHSFIIHEDPSLNY 85
>SPAC25B8.16 |||RNase P and RNase MRP subunit |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 698
Score = 25.0 bits (52), Expect = 9.5
Identities = 16/48 (33%), Positives = 26/48 (54%), Gaps = 3/48 (6%)
Frame = +1
Query: 466 LPSNTIMAVKRITATFNNQSLEQK---RLLMDLDVSMRASACPYTVHF 600
LP ++VK + T +++L +K LL + S+ ASA Y+ HF
Sbjct: 380 LPMGASISVKALVNTRCDKNLSEKGEKSLLDSAENSLPASANQYSTHF 427
>SPBC2D10.17 |clr1||cryptic loci regulator Clr1|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 1238
Score = 25.0 bits (52), Expect = 9.5
Identities = 11/28 (39%), Positives = 17/28 (60%)
Frame = -3
Query: 274 LDISPLVLAVLTSQLSVLLNNRIKYPSK 191
LD+SP + L Q V +N R+ YP++
Sbjct: 465 LDLSPDKVIQLREQNGVAVNGRVCYPTR 492
>SPAC20G4.03c |hri1||eIF2 alpha kinase Hri1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 704
Score = 25.0 bits (52), Expect = 9.5
Identities = 13/36 (36%), Positives = 20/36 (55%)
Frame = +1
Query: 394 HADDLVKICDLGRGAYGIVEKMRHLPSNTIMAVKRI 501
+A D ++ LG+G YG V K R+ A+K+I
Sbjct: 220 YASDFEELELLGKGGYGSVYKARNKFDGVEYALKKI 255
>SPAC11H11.04 |mam2||pheromone p-factor receptor|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 348
Score = 25.0 bits (52), Expect = 9.5
Identities = 10/28 (35%), Positives = 18/28 (64%), Gaps = 2/28 (7%)
Frame = -2
Query: 116 INICNNSYMKTIN--FSMNDIFLYFNLF 39
+ IC+NSY +N F +N + +Y ++F
Sbjct: 99 VTICSNSYSILVNYGFILNMVHMYVHVF 126
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,681,754
Number of Sequences: 5004
Number of extensions: 53729
Number of successful extensions: 197
Number of sequences better than 10.0: 28
Number of HSP's better than 10.0 without gapping: 185
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 195
length of database: 2,362,478
effective HSP length: 70
effective length of database: 2,012,198
effective search space used: 293780908
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -