Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fe100P05_F_K12
(651 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY569781-1|AAS75781.1| 461|Apis mellifera neuronal nicotinic ac... 25 0.84
DQ666693-1|ABG29167.1| 250|Apis mellifera MAX dimerization prot... 23 2.6
AM050259-1|CAJ18340.1| 683|Apis mellifera putative H3K9 methylt... 23 2.6
DQ325087-1|ABD14101.1| 179|Apis mellifera complementary sex det... 22 5.9
DQ325086-1|ABD14100.1| 179|Apis mellifera complementary sex det... 22 5.9
DQ325085-1|ABD14099.1| 179|Apis mellifera complementary sex det... 22 5.9
DQ325084-1|ABD14098.1| 179|Apis mellifera complementary sex det... 22 5.9
AY569717-1|AAS86670.1| 397|Apis mellifera complementary sex det... 22 5.9
AY569712-1|AAS86665.1| 408|Apis mellifera complementary sex det... 22 5.9
AY395072-1|AAQ96728.1| 593|Apis mellifera GABA neurotransmitter... 22 5.9
AY395071-1|AAQ96727.1| 646|Apis mellifera GABA neurotransmitter... 22 5.9
>AY569781-1|AAS75781.1| 461|Apis mellifera neuronal nicotinic
acetylcholine Apisa7-2 subunit protein.
Length = 461
Score = 24.6 bits (51), Expect = 0.84
Identities = 9/30 (30%), Positives = 17/30 (56%)
Frame = +3
Query: 177 WLSNRFEGYLIRLFNKTDSCEVNTASTNGE 266
W S ++GY + L +++ +V+ NGE
Sbjct: 149 WASWTYDGYQLELEKQSEQGDVSNYQANGE 178
Score = 21.8 bits (44), Expect = 5.9
Identities = 10/28 (35%), Positives = 15/28 (53%)
Frame = -2
Query: 383 VRSSTVIVVCLSKXPWWSHNLFRLSLKV 300
V ++ VIV + W SH +FR S +
Sbjct: 106 VINTNVIVSHTGEVVWLSHGIFRSSCDI 133
>DQ666693-1|ABG29167.1| 250|Apis mellifera MAX dimerization protein
protein.
Length = 250
Score = 23.0 bits (47), Expect = 2.6
Identities = 13/37 (35%), Positives = 18/37 (48%)
Frame = +2
Query: 425 LAEEHMALLRRCATYLATLLWLLRESQPHSTINLWNK 535
L + A LR C L L+ L E+ H+T+ L K
Sbjct: 56 LEKNRRAHLRNCLEKLKVLVPLGPETSRHTTLGLLTK 92
>AM050259-1|CAJ18340.1| 683|Apis mellifera putative H3K9
methyltransferase protein.
Length = 683
Score = 23.0 bits (47), Expect = 2.6
Identities = 9/17 (52%), Positives = 10/17 (58%)
Frame = +1
Query: 544 LMDLDVSMRASACPYTV 594
L DLD + CPYTV
Sbjct: 550 LFDLDYNESEEQCPYTV 566
>DQ325087-1|ABD14101.1| 179|Apis mellifera complementary sex
determiner protein.
Length = 179
Score = 21.8 bits (44), Expect = 5.9
Identities = 10/33 (30%), Positives = 18/33 (54%)
Frame = -2
Query: 110 ICNNSYMKTINFSMNDIFLYFNLFFTS*VPKPL 12
I NN+Y N + + LY+N+ + +P P+
Sbjct: 90 IHNNNYKYNYNNNNYNKKLYYNINYIEQIPIPV 122
>DQ325086-1|ABD14100.1| 179|Apis mellifera complementary sex
determiner protein.
Length = 179
Score = 21.8 bits (44), Expect = 5.9
Identities = 10/33 (30%), Positives = 18/33 (54%)
Frame = -2
Query: 110 ICNNSYMKTINFSMNDIFLYFNLFFTS*VPKPL 12
I NN+Y N + + LY+N+ + +P P+
Sbjct: 90 IHNNNYKYNYNNNNYNKKLYYNINYIEQIPIPV 122
>DQ325085-1|ABD14099.1| 179|Apis mellifera complementary sex
determiner protein.
Length = 179
Score = 21.8 bits (44), Expect = 5.9
Identities = 10/33 (30%), Positives = 18/33 (54%)
Frame = -2
Query: 110 ICNNSYMKTINFSMNDIFLYFNLFFTS*VPKPL 12
I NN+Y N + + LY+N+ + +P P+
Sbjct: 90 IHNNNYKYNYNNNNYNKKLYYNINYIEQIPIPV 122
>DQ325084-1|ABD14098.1| 179|Apis mellifera complementary sex
determiner protein.
Length = 179
Score = 21.8 bits (44), Expect = 5.9
Identities = 10/33 (30%), Positives = 18/33 (54%)
Frame = -2
Query: 110 ICNNSYMKTINFSMNDIFLYFNLFFTS*VPKPL 12
I NN+Y N + + LY+N+ + +P P+
Sbjct: 90 IHNNNYKYNYNNNNYNKKLYYNINYIEQIPIPV 122
>AY569717-1|AAS86670.1| 397|Apis mellifera complementary sex
determiner protein.
Length = 397
Score = 21.8 bits (44), Expect = 5.9
Identities = 10/31 (32%), Positives = 15/31 (48%)
Frame = -2
Query: 104 NNSYMKTINFSMNDIFLYFNLFFTS*VPKPL 12
NN K N + N LY+N+ +P P+
Sbjct: 307 NNYNYKNYNNNYNSKKLYYNIINIEQIPVPV 337
>AY569712-1|AAS86665.1| 408|Apis mellifera complementary sex
determiner protein.
Length = 408
Score = 21.8 bits (44), Expect = 5.9
Identities = 10/31 (32%), Positives = 15/31 (48%)
Frame = -2
Query: 104 NNSYMKTINFSMNDIFLYFNLFFTS*VPKPL 12
NN K N + N LY+N+ +P P+
Sbjct: 318 NNYNYKNYNNNYNSKKLYYNIINIEQIPVPV 348
>AY395072-1|AAQ96728.1| 593|Apis mellifera GABA neurotransmitter
transporter-1B protein.
Length = 593
Score = 21.8 bits (44), Expect = 5.9
Identities = 8/24 (33%), Positives = 11/24 (45%)
Frame = -2
Query: 392 TVNVRSSTVIVVCLSKXPWWSHNL 321
T N+ + + PWWSH L
Sbjct: 508 TFNIIKFVPVKYLTYEYPWWSHVL 531
>AY395071-1|AAQ96727.1| 646|Apis mellifera GABA neurotransmitter
transporter-1B protein.
Length = 646
Score = 21.8 bits (44), Expect = 5.9
Identities = 8/24 (33%), Positives = 11/24 (45%)
Frame = -2
Query: 392 TVNVRSSTVIVVCLSKXPWWSHNL 321
T N+ + + PWWSH L
Sbjct: 561 TFNIIKFVPVKYLTYEYPWWSHVL 584
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 181,902
Number of Sequences: 438
Number of extensions: 3918
Number of successful extensions: 17
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 16
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 17
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 19682733
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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