Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fe100P05_F_K11
         (655 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB253415-1|BAE86926.1|  588|Apis mellifera alpha-glucosidase pro...    25   0.64 
AB204558-1|BAD89803.1| 1143|Apis mellifera nitric oxide synthase...    24   1.1  
AY898652-1|AAX83121.1|  349|Apis mellifera AKH receptor protein.       22   4.5  

>AB253415-1|BAE86926.1|  588|Apis mellifera alpha-glucosidase
           protein.
          Length = 588

 Score = 25.0 bits (52), Expect = 0.64
 Identities = 15/44 (34%), Positives = 24/44 (54%), Gaps = 1/44 (2%)
 Frame = -2

Query: 600 IFTRSARSFLSSSDKPNPSSITSPGTTRTL-D*NTPGFSLRSLS 472
           I+T S  S L+ +   NP +I  PG T  + D +T G ++ + S
Sbjct: 530 IYTSSVNSNLTVNQTVNPVAINIPGDTSIIVDSSTSGATIVNYS 573


>AB204558-1|BAD89803.1| 1143|Apis mellifera nitric oxide synthase
            protein.
          Length = 1143

 Score = 24.2 bits (50), Expect = 1.1
 Identities = 10/26 (38%), Positives = 14/26 (53%)
 Frame = -2

Query: 600  IFTRSARSFLSSSDKPNPSSITSPGT 523
            +F RSA +F   S+   P  +  PGT
Sbjct: 950  VFVRSAPNFYMPSEPKAPMILVGPGT 975


>AY898652-1|AAX83121.1|  349|Apis mellifera AKH receptor protein.
          Length = 349

 Score = 22.2 bits (45), Expect = 4.5
 Identities = 8/22 (36%), Positives = 13/22 (59%)
 Frame = +2

Query: 377 CTDLDRIYLLMRPKKSVSPDKR 442
           C  +DR Y +++P +    DKR
Sbjct: 131 CISMDRYYAVIKPLQLWDVDKR 152


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 181,701
Number of Sequences: 438
Number of extensions: 3902
Number of successful extensions: 7
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 19804986
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)