Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fe100P05_F_K06
         (651 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

12_02_0890 + 24040981-24041125,24041264-24041317,24042675-240428...    30   1.8  
02_01_0767 - 5709733-5709789,5709845-5709871,5710374-5710449,571...    29   3.2  
07_03_0633 + 20120560-20123464,20123608-20123672                       27   9.8  

>12_02_0890 +
           24040981-24041125,24041264-24041317,24042675-24042872,
           24043367-24043635
          Length = 221

 Score = 29.9 bits (64), Expect = 1.8
 Identities = 19/51 (37%), Positives = 31/51 (60%), Gaps = 1/51 (1%)
 Frame = +3

Query: 45  RTFSDCV*KTKIWTRRSYGNGKRLKRRHLRPRALKKRKGMTLN-SKMTAKR 194
           +  + CV  +K++T +S  NG    RRHL  + L KRKG+T   +K+T+ +
Sbjct: 167 KDMATCVHCSKVYTAKST-NGTSHLRRHLTSKCL-KRKGLTEELAKLTSTK 215


>02_01_0767 - 5709733-5709789,5709845-5709871,5710374-5710449,
            5710542-5710661,5711321-5711421,5711618-5711743,
            5713504-5713596,5713694-5713816,5713889-5714032,
            5714539-5714672,5714893-5715002,5715315-5715430,
            5716438-5716572,5716650-5716820,5717545-5717709,
            5718165-5718242,5718313-5718445,5718551-5718741,
            5718842-5718914,5719001-5719056,5719142-5719300,
            5719383-5719496,5719562-5719654,5720544-5720726,
            5720801-5720878,5720966-5721052,5721135-5721216,
            5721288-5721400,5721486-5721636,5721759-5721877,
            5721966-5722163,5722377-5722442,5723837-5723957,
            5724224-5724343,5724412-5724542,5725210-5725341,
            5725418-5725519,5726231-5726437,5726510-5726626,
            5727468-5727623,5727721-5727810,5728624-5728848,
            5728969-5729091,5729202-5729284,5729459-5729618,
            5730264-5730374,5730652-5730751,5731375-5731454,
            5731752-5731847,5731961-5732110
          Length = 1991

 Score = 29.1 bits (62), Expect = 3.2
 Identities = 12/33 (36%), Positives = 19/33 (57%)
 Frame = +1

Query: 295  IVRHMRARHQDGDDHPLSLDEILDETNQLDVGN 393
            ++R +    Q+GDD  L L ++L E N+L   N
Sbjct: 1380 VLRFLLLEEQEGDDDELGLQKVLKEQNELARSN 1412


>07_03_0633 + 20120560-20123464,20123608-20123672
          Length = 989

 Score = 27.5 bits (58), Expect = 9.8
 Identities = 13/36 (36%), Positives = 22/36 (61%), Gaps = 1/36 (2%)
 Frame = -1

Query: 495 HLSSAIRKCVCCCNYY-*GNLFIISILIKRYLFYFI 391
           HL   +RKC+C C+ +  G LF  ++LI  ++  F+
Sbjct: 403 HLCDHLRKCLCYCSIFPSGYLFEKNMLIHMWIASFM 438


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,714,619
Number of Sequences: 37544
Number of extensions: 256107
Number of successful extensions: 601
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 587
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 601
length of database: 14,793,348
effective HSP length: 79
effective length of database: 11,827,372
effective search space used: 1620349964
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)