Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fe100P05_F_K06
(651 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
X63469-1|CAA45069.1| 291|Homo sapiens transcription factor TFII... 80 8e-15
S67861-1|AAB20414.1| 291|Homo sapiens general transcription fac... 80 8e-15
BC030572-1|AAH30572.1| 291|Homo sapiens general transcription f... 80 8e-15
AF292062-1|AAG39077.1| 291|Homo sapiens general transcription f... 77 5e-14
BC057225-1|AAH57225.1| 330|Homo sapiens ANKRD12 protein protein. 33 0.88
AY373757-1|AAR25662.1| 2062|Homo sapiens ankyrin repeat-containi... 33 0.88
AK024808-1|BAB15014.1| 492|Homo sapiens protein ( Homo sapiens ... 33 0.88
AF317425-1|AAG38609.1| 2062|Homo sapiens GAC-1 protein. 33 0.88
BC070234-1|AAH70234.1| 371|Homo sapiens ANKRD12 protein protein. 30 6.2
AY533564-1|AAS45545.2| 2039|Homo sapiens ankyrin repeat-containi... 30 6.2
>X63469-1|CAA45069.1| 291|Homo sapiens transcription factor TFIIE
beta protein.
Length = 291
Score = 79.8 bits (188), Expect = 8e-15
Identities = 35/53 (66%), Positives = 43/53 (81%)
Frame = +1
Query: 247 KTMTGSSSYRFGVLARIVRHMRARHQDGDDHPLSLDEILDETNQLDVGNKIKQ 405
K ++GSS Y+FGVLA+IV +M+ RHQ GD HPL+LDEILDET LD+G K KQ
Sbjct: 65 KALSGSSGYKFGVLAKIVNYMKTRHQRGDTHPLTLDEILDETQHLDIGLKQKQ 117
Score = 40.7 bits (91), Expect = 0.004
Identities = 17/23 (73%), Positives = 21/23 (91%)
Frame = +2
Query: 80 MDPALLREREAFKKKALATPSIE 148
MDP+LLRERE FKK+AL+TP +E
Sbjct: 1 MDPSLLRERELFKKRALSTPVVE 23
>S67861-1|AAB20414.1| 291|Homo sapiens general transcription factor
IIE 34 kda subunit protein.
Length = 291
Score = 79.8 bits (188), Expect = 8e-15
Identities = 35/53 (66%), Positives = 43/53 (81%)
Frame = +1
Query: 247 KTMTGSSSYRFGVLARIVRHMRARHQDGDDHPLSLDEILDETNQLDVGNKIKQ 405
K ++GSS Y+FGVLA+IV +M+ RHQ GD HPL+LDEILDET LD+G K KQ
Sbjct: 65 KALSGSSGYKFGVLAKIVNYMKTRHQRGDTHPLTLDEILDETQHLDIGLKQKQ 117
Score = 40.7 bits (91), Expect = 0.004
Identities = 17/23 (73%), Positives = 21/23 (91%)
Frame = +2
Query: 80 MDPALLREREAFKKKALATPSIE 148
MDP+LLRERE FKK+AL+TP +E
Sbjct: 1 MDPSLLRERELFKKRALSTPVVE 23
>BC030572-1|AAH30572.1| 291|Homo sapiens general transcription
factor IIE, polypeptide 2, beta 34kDa protein.
Length = 291
Score = 79.8 bits (188), Expect = 8e-15
Identities = 35/53 (66%), Positives = 43/53 (81%)
Frame = +1
Query: 247 KTMTGSSSYRFGVLARIVRHMRARHQDGDDHPLSLDEILDETNQLDVGNKIKQ 405
K ++GSS Y+FGVLA+IV +M+ RHQ GD HPL+LDEILDET LD+G K KQ
Sbjct: 65 KALSGSSGYKFGVLAKIVNYMKTRHQRGDTHPLTLDEILDETQHLDIGLKQKQ 117
Score = 40.7 bits (91), Expect = 0.004
Identities = 17/23 (73%), Positives = 21/23 (91%)
Frame = +2
Query: 80 MDPALLREREAFKKKALATPSIE 148
MDP+LLRERE FKK+AL+TP +E
Sbjct: 1 MDPSLLRERELFKKRALSTPVVE 23
>AF292062-1|AAG39077.1| 291|Homo sapiens general transcription
factor protein.
Length = 291
Score = 77.0 bits (181), Expect = 5e-14
Identities = 34/53 (64%), Positives = 42/53 (79%)
Frame = +1
Query: 247 KTMTGSSSYRFGVLARIVRHMRARHQDGDDHPLSLDEILDETNQLDVGNKIKQ 405
K ++GSS Y+FGVLA+IV +M+ RHQ G HPL+LDEILDET LD+G K KQ
Sbjct: 65 KALSGSSGYKFGVLAKIVNYMKTRHQRGXTHPLTLDEILDETQHLDIGLKQKQ 117
Score = 40.7 bits (91), Expect = 0.004
Identities = 17/23 (73%), Positives = 21/23 (91%)
Frame = +2
Query: 80 MDPALLREREAFKKKALATPSIE 148
MDP+LLRERE FKK+AL+TP +E
Sbjct: 1 MDPSLLRERELFKKRALSTPVVE 23
>BC057225-1|AAH57225.1| 330|Homo sapiens ANKRD12 protein protein.
Length = 330
Score = 33.1 bits (72), Expect = 0.88
Identities = 24/67 (35%), Positives = 33/67 (49%), Gaps = 5/67 (7%)
Frame = +3
Query: 45 RTFSDCV*KTKIWTRRSYGNGKRLKRRHLRPRALKKRKGMTLNSKMTAKRNR-----NHP 209
RT+S+ K T++ GN K L L +RK M L +MTA+ N NHP
Sbjct: 98 RTYSEKEGPEKKKTKKEAGNKKSTPVSILFGYPLSERKQMALLMQMTARDNSPDSTPNHP 157
Query: 210 AQSAPDQ 230
+Q+ P Q
Sbjct: 158 SQTTPAQ 164
>AY373757-1|AAR25662.1| 2062|Homo sapiens ankyrin repeat-containing
protein protein.
Length = 2062
Score = 33.1 bits (72), Expect = 0.88
Identities = 24/67 (35%), Positives = 33/67 (49%), Gaps = 5/67 (7%)
Frame = +3
Query: 45 RTFSDCV*KTKIWTRRSYGNGKRLKRRHLRPRALKKRKGMTLNSKMTAKRNR-----NHP 209
RT+S+ K T++ GN K L L +RK M L +MTA+ N NHP
Sbjct: 98 RTYSEKEGPEKKKTKKEAGNKKSTPVSILFGYPLSERKQMALLMQMTARDNSPDSTPNHP 157
Query: 210 AQSAPDQ 230
+Q+ P Q
Sbjct: 158 SQTTPAQ 164
>AK024808-1|BAB15014.1| 492|Homo sapiens protein ( Homo sapiens
cDNA: FLJ21155 fis, clone CAS09757. ).
Length = 492
Score = 33.1 bits (72), Expect = 0.88
Identities = 24/67 (35%), Positives = 33/67 (49%), Gaps = 5/67 (7%)
Frame = +3
Query: 45 RTFSDCV*KTKIWTRRSYGNGKRLKRRHLRPRALKKRKGMTLNSKMTAKRNR-----NHP 209
RT+S+ K T++ GN K L L +RK M L +MTA+ N NHP
Sbjct: 98 RTYSEKEGPEKKKTKKEAGNKKSTPVSILFGYPLSERKQMALLMQMTARDNSPDSTPNHP 157
Query: 210 AQSAPDQ 230
+Q+ P Q
Sbjct: 158 SQTTPAQ 164
>AF317425-1|AAG38609.1| 2062|Homo sapiens GAC-1 protein.
Length = 2062
Score = 33.1 bits (72), Expect = 0.88
Identities = 24/67 (35%), Positives = 33/67 (49%), Gaps = 5/67 (7%)
Frame = +3
Query: 45 RTFSDCV*KTKIWTRRSYGNGKRLKRRHLRPRALKKRKGMTLNSKMTAKRNR-----NHP 209
RT+S+ K T++ GN K L L +RK M L +MTA+ N NHP
Sbjct: 98 RTYSEKEGPEKKKTKKEAGNKKSTPVSILFGYPLSERKQMALLMQMTARDNSPDSTPNHP 157
Query: 210 AQSAPDQ 230
+Q+ P Q
Sbjct: 158 SQTTPAQ 164
>BC070234-1|AAH70234.1| 371|Homo sapiens ANKRD12 protein protein.
Length = 371
Score = 30.3 bits (65), Expect = 6.2
Identities = 20/54 (37%), Positives = 27/54 (50%), Gaps = 5/54 (9%)
Frame = +3
Query: 84 TRRSYGNGKRLKRRHLRPRALKKRKGMTLNSKMTAKRNR-----NHPAQSAPDQ 230
T++ GN K L L +RK M L +MTA+ N NHP+Q+ P Q
Sbjct: 88 TKKEAGNKKSTPVSILFGYPLSERKQMALLMQMTARDNSPDSTPNHPSQTTPAQ 141
>AY533564-1|AAS45545.2| 2039|Homo sapiens ankyrin repeat-containing
cofactor-2 protein.
Length = 2039
Score = 30.3 bits (65), Expect = 6.2
Identities = 20/54 (37%), Positives = 27/54 (50%), Gaps = 5/54 (9%)
Frame = +3
Query: 84 TRRSYGNGKRLKRRHLRPRALKKRKGMTLNSKMTAKRNR-----NHPAQSAPDQ 230
T++ GN K L L +RK M L +MTA+ N NHP+Q+ P Q
Sbjct: 88 TKKEAGNKKSTPVSILFGYPLSERKQMALLMQMTARDNSPDSTPNHPSQTTPAQ 141
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 82,027,343
Number of Sequences: 237096
Number of extensions: 1522381
Number of successful extensions: 2687
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 2637
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2687
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 7253890590
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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