Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fe100P05_F_K04
         (630 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

04_01_0271 + 3612066-3614056,3614666-3614780                           33   0.25 
05_01_0324 + 2549354-2549482,2550092-2550493,2550789-2551727           29   3.0  
04_02_0017 - 8572400-8572732,8572818-8572919,8573138-8573230,857...    28   5.3  
05_06_0084 - 25435650-25436600                                         28   7.0  
04_04_1249 - 32067644-32067787,32068245-32068346,32068415-320684...    28   7.0  
03_02_0902 + 12278770-12281448                                         27   9.3  

>04_01_0271 + 3612066-3614056,3614666-3614780
          Length = 701

 Score = 32.7 bits (71), Expect = 0.25
 Identities = 17/45 (37%), Positives = 25/45 (55%)
 Frame = +3

Query: 414 DDEALQNAYSCFQNCKQLEADSVKQNDLNIKLQELNKKLLESIAN 548
           D+  LQ A+S F  CK+   DSV   D++    E+ +KL+  I N
Sbjct: 195 DEFLLQRAHSLFHICKRGIVDSVINVDMDKTEAEITRKLINQIRN 239


>05_01_0324 + 2549354-2549482,2550092-2550493,2550789-2551727
          Length = 489

 Score = 29.1 bits (62), Expect = 3.0
 Identities = 10/22 (45%), Positives = 15/22 (68%)
 Frame = +3

Query: 285 KIIKITSKMDKYALPNLPTPQH 350
           K+  +  K+ KY LP+LP P+H
Sbjct: 47  KVALLLQKLKKYELPDLPAPRH 68


>04_02_0017 -
           8572400-8572732,8572818-8572919,8573138-8573230,
           8573391-8573519,8573781-8574025,8574184-8574453,
           8574590-8574752,8575965-8576063
          Length = 477

 Score = 28.3 bits (60), Expect = 5.3
 Identities = 13/27 (48%), Positives = 20/27 (74%)
 Frame = +3

Query: 459 KQLEADSVKQNDLNIKLQELNKKLLES 539
           +QL A+ + ++DL  ++QEL KKL ES
Sbjct: 419 EQLAAEKLAKDDLKSQVQELAKKLQES 445


>05_06_0084 - 25435650-25436600
          Length = 316

 Score = 27.9 bits (59), Expect = 7.0
 Identities = 13/32 (40%), Positives = 18/32 (56%), Gaps = 2/32 (6%)
 Frame = +1

Query: 340 HHNMYLKTLPTVKF*I--LHIHLSYKRMMKHC 429
           HH+  +K    V F    LH+HLS +R  +HC
Sbjct: 285 HHDCIVKVFRQVWFEYINLHLHLSRRRRARHC 316


>04_04_1249 -
           32067644-32067787,32068245-32068346,32068415-32068438,
           32068439-32068543,32068625-32068729,32068885-32068966,
           32069254-32069456,32069534-32069692,32070045-32070154,
           32070264-32070405,32070544-32070690,32070773-32070847,
           32070923-32071132,32071223-32071426,32071514-32071633,
           32071743-32071852,32072033-32072177,32072266-32072499,
           32072611-32072646
          Length = 818

 Score = 27.9 bits (59), Expect = 7.0
 Identities = 15/51 (29%), Positives = 29/51 (56%), Gaps = 1/51 (1%)
 Frame = +3

Query: 405 LQTDDEALQNAYSCFQNCKQ-LEADSVKQNDLNIKLQELNKKLLESIANMK 554
           +Q  ++ LQ   +  Q     L+AD+ K  D+  KLQ+    ++E++A++K
Sbjct: 219 VQDTNKRLQEYNTSLQQYNSNLQADASKSGDIISKLQKEKSAMMETMASLK 269


>03_02_0902 + 12278770-12281448
          Length = 892

 Score = 27.5 bits (58), Expect = 9.3
 Identities = 12/34 (35%), Positives = 17/34 (50%)
 Frame = -3

Query: 418 SSVCNLNEYVRFKISLSEASSSTCCGVGKFGKAY 317
           S++C    +V  K + +    S   GVG FGK Y
Sbjct: 521 SNLCRHFSFVEIKAATNNFDESLLLGVGGFGKVY 554


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,595,752
Number of Sequences: 37544
Number of extensions: 218768
Number of successful extensions: 478
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 472
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 478
length of database: 14,793,348
effective HSP length: 79
effective length of database: 11,827,372
effective search space used: 1537558360
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)