Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fe100P05_F_K04
         (630 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ535206-1|CAD59406.1| 1376|Anopheles gambiae SMC4 protein protein.    25   2.0  
U42429-1|AAB54088.1|  596|Anopheles gambiae engrailed protein.         23   8.0  
U42214-1|AAB58461.1|  596|Anopheles gambiae engrailed protein.         23   8.0  

>AJ535206-1|CAD59406.1| 1376|Anopheles gambiae SMC4 protein protein.
          Length = 1376

 Score = 25.0 bits (52), Expect = 2.0
 Identities = 18/74 (24%), Positives = 34/74 (45%)
 Frame = +3

Query: 306  KMDKYALPNLPTPQHVLEDASDSEILNLTYSFKLQTDDEALQNAYSCFQNCKQLEADSVK 485
            ++D Y LP+L     +LE+  ++   NL+        DE L+   +       LE  + K
Sbjct: 1059 ELDSYKLPDLQYQISILEEKLNANKPNLS------VIDEFLKKREAYLMRVAVLEEITAK 1112

Query: 486  QNDLNIKLQELNKK 527
            +N++     ++ KK
Sbjct: 1113 RNEMRQLYDDVRKK 1126


>U42429-1|AAB54088.1|  596|Anopheles gambiae engrailed protein.
          Length = 596

 Score = 23.0 bits (47), Expect = 8.0
 Identities = 10/21 (47%), Positives = 12/21 (57%)
 Frame = +3

Query: 333 LPTPQHVLEDASDSEILNLTY 395
           LP PQHVL  A    +L+  Y
Sbjct: 172 LPYPQHVLHPAHHPALLHPAY 192


>U42214-1|AAB58461.1|  596|Anopheles gambiae engrailed protein.
          Length = 596

 Score = 23.0 bits (47), Expect = 8.0
 Identities = 10/21 (47%), Positives = 12/21 (57%)
 Frame = +3

Query: 333 LPTPQHVLEDASDSEILNLTY 395
           LP PQHVL  A    +L+  Y
Sbjct: 172 LPYPQHVLHPAHHPALLHPAY 192


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 539,387
Number of Sequences: 2352
Number of extensions: 10869
Number of successful extensions: 15
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 14
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 15
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 61468785
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)