Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fe100P05_F_K04
         (630 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AC025716-1|AAK39606.1|  788|Caenorhabditis elegans Hypothetical ...    27   8.4  

>AC025716-1|AAK39606.1|  788|Caenorhabditis elegans Hypothetical
           protein Y39G10AR.11 protein.
          Length = 788

 Score = 27.5 bits (58), Expect = 8.4
 Identities = 20/72 (27%), Positives = 38/72 (52%), Gaps = 6/72 (8%)
 Frame = +3

Query: 345 QHVLEDASDSEILNLTYSFKLQTDDEALQNAYSCFQNCKQ------LEADSVKQNDLNIK 506
           ++V  +A   +ILN T + +   + E L+N  + F+  K       + AD     +  +K
Sbjct: 169 ENVKLEAQKEDILNHTKNSEKMWN-ERLENITADFERLKSSSKPSGIRADQKMFQENEMK 227

Query: 507 LQELNKKLLESI 542
           +QELN+KL +++
Sbjct: 228 IQELNRKLKDAL 239


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,187,242
Number of Sequences: 27780
Number of extensions: 234523
Number of successful extensions: 632
Number of sequences better than 10.0: 1
Number of HSP's better than 10.0 without gapping: 611
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 632
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1385109898
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)