Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fe100P05_F_K03
         (657 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

06_03_1172 - 28147957-28148274,28149362-28149877                       34   0.11 
08_02_0638 + 19603399-19604679                                         31   0.61 
05_01_0248 - 1864092-1864204,1864570-1864608,1864661-1864730,186...    29   2.5  
04_04_1105 - 30942735-30942791,30943116-30943466,30943670-309437...    29   4.3  
07_01_0998 - 8414492-8415175                                           28   5.7  
04_04_0634 - 26777889-26778452,26778526-26778797,26778905-267791...    28   5.7  
08_01_0068 + 471729-472460,472578-472655,473270-473507,474130-47...    28   7.5  
06_02_0325 + 14428065-14428799,14428916-14428993,14429607-144298...    28   7.5  
02_01_0327 - 2241228-2242509,2243227-2243247,2243299-2243614,224...    28   7.5  
09_04_0595 - 18843708-18844110,18844237-18844241,18844362-18844451     27   9.9  
08_02_1151 - 24712200-24713750,24714587-24715009,24716076-24716201     27   9.9  

>06_03_1172 - 28147957-28148274,28149362-28149877
          Length = 277

 Score = 33.9 bits (74), Expect = 0.11
 Identities = 23/77 (29%), Positives = 35/77 (45%)
 Frame = +2

Query: 188 PLARSVRPWCSRCTCTTPVWAAYTRSDYSTFNVPYALYSSPSSGFHYW*PCPIISLRACS 367
           P   SV P+    T   P   A T   Y+  ++  +   SPSS  HYW     + L AC+
Sbjct: 16  PSPPSVYPFLPPATFIPPPPPAATAEPYAPPSLIISPPPSPSSVLHYWGLAVAVVLVACT 75

Query: 368 MTLKMKMVRRHCQRRPR 418
           +++ M  +    +RR R
Sbjct: 76  ISIWMGYMLAKFERRRR 92


>08_02_0638 + 19603399-19604679
          Length = 426

 Score = 31.5 bits (68), Expect = 0.61
 Identities = 13/24 (54%), Positives = 18/24 (75%)
 Frame = -2

Query: 590 ASSISSFVGGFRDHGGDFLSFKGH 519
           AS+ SS + G +DHGG +LSF+ H
Sbjct: 254 ASAPSSSLLGMQDHGGSYLSFQSH 277


>05_01_0248 -
           1864092-1864204,1864570-1864608,1864661-1864730,
           1864976-1865043,1866114-1866201,1866282-1866309,
           1866406-1866451,1866571-1866796
          Length = 225

 Score = 29.5 bits (63), Expect = 2.5
 Identities = 17/46 (36%), Positives = 21/46 (45%)
 Frame = +1

Query: 514 LQWPLKDKKSPPWSRKPPTKEEIDDAVLKGKAALKELIKVENLRKP 651
           LQ PL+   +PP  R PPT      A   G     E  KVE + +P
Sbjct: 48  LQRPLRVNHAPP-RRLPPTAARAQSAAAAGYQPESEFYKVEAILRP 92


>04_04_1105 - 30942735-30942791,30943116-30943466,30943670-30943762,
            30943869-30944072,30944155-30944399,30945019-30945877,
            30946070-30946936,30947113-30947562
          Length = 1041

 Score = 28.7 bits (61), Expect = 4.3
 Identities = 16/59 (27%), Positives = 26/59 (44%)
 Frame = -3

Query: 382  HFQCHRTRPQRDYRTRSPIVKSRGWR*VQRIWHIESAVIASGICGPHRSRTRTPAAPGA 206
            H+  H T  +R      P V    WR +   W+ E A  AS  C   R+++   ++ G+
Sbjct: 839  HYDSHITEEER-LADCDPRVLKEQWRFLVAFWNTEEAQAASARCKASRAKSTYISSTGS 896


>07_01_0998 - 8414492-8415175
          Length = 227

 Score = 28.3 bits (60), Expect = 5.7
 Identities = 17/78 (21%), Positives = 37/78 (47%)
 Frame = +1

Query: 256 YQKRLQHFQCAICVVLIAILGISLLVTVSYNLAEGVFDDIENENGTETLSTKTTAKPVII 435
           Y  R   F CA+C++L+A + +  ++  +Y     V   +E+ + T   +  + ++   +
Sbjct: 28  YDTRETIFYCAVCLLLVAAVVLLAVLLAAYGFIRHVSITVESASLTR-FNLSSPSEATAL 86

Query: 436 PSDVPLPLIVERNLTAVS 489
             ++ L L V     A+S
Sbjct: 87  AYNLSLTLAVRNKNWAMS 104


>04_04_0634 -
           26777889-26778452,26778526-26778797,26778905-26779117,
           26779497-26779578
          Length = 376

 Score = 28.3 bits (60), Expect = 5.7
 Identities = 20/58 (34%), Positives = 28/58 (48%), Gaps = 5/58 (8%)
 Frame = +1

Query: 466 ERNLTAVSPSLQPFLNLQWPLKDKKS-----PPWSRKPPTKEEIDDAVLKGKAALKEL 624
           ER   +V  +L P   L +  + K       PP  R  PT EE+ D  L+ K ALK++
Sbjct: 22  ERESASVHINLLPVRELYFDPRKKMDAFSHVPPGFRFHPTDEELVDYYLRKKVALKKI 79


>08_01_0068 +
           471729-472460,472578-472655,473270-473507,474130-474205,
           474820-474961,475326-475619,476037-476249
          Length = 590

 Score = 27.9 bits (59), Expect = 7.5
 Identities = 16/40 (40%), Positives = 18/40 (45%)
 Frame = +1

Query: 382 ENGTETLSTKTTAKPVIIPSDVPLPLIVERNLTAVSPSLQ 501
           ENGT     +    PVI P  VP P   E    AVS  +Q
Sbjct: 48  ENGTSPAHHQADNAPVIAPPPVPEPAPPEPEKPAVSTDVQ 87


>06_02_0325 +
           14428065-14428799,14428916-14428993,14429607-14429844,
           14431199-14431296,14431770-14432063,14432418-14432702
          Length = 575

 Score = 27.9 bits (59), Expect = 7.5
 Identities = 16/40 (40%), Positives = 18/40 (45%)
 Frame = +1

Query: 382 ENGTETLSTKTTAKPVIIPSDVPLPLIVERNLTAVSPSLQ 501
           ENGT     +    PVI P  VP P   E    AVS  +Q
Sbjct: 48  ENGTSPAHHQADNAPVIAPPPVPEPAPPEPEKPAVSTDVQ 87


>02_01_0327 -
           2241228-2242509,2243227-2243247,2243299-2243614,
           2244232-2244496,2245887-2245985
          Length = 660

 Score = 27.9 bits (59), Expect = 7.5
 Identities = 16/37 (43%), Positives = 20/37 (54%)
 Frame = +3

Query: 231 VRLRCGPHIPEAITALSMCHMRCTHRHPRDFTIGDRV 341
           +  +CG H   A+  L   HMR T R P  FT+GD V
Sbjct: 341 ILFKCGAH---AVRLLP--HMRATKRCPIAFTVGDGV 372


>09_04_0595 - 18843708-18844110,18844237-18844241,18844362-18844451
          Length = 165

 Score = 27.5 bits (58), Expect = 9.9
 Identities = 13/32 (40%), Positives = 19/32 (59%)
 Frame = +1

Query: 508 LNLQWPLKDKKSPPWSRKPPTKEEIDDAVLKG 603
           LNL+ P+K++K     RK  T  E++DA   G
Sbjct: 124 LNLRLPMKEEKRHHSRRKGGTMAEVEDAATGG 155


>08_02_1151 - 24712200-24713750,24714587-24715009,24716076-24716201
          Length = 699

 Score = 27.5 bits (58), Expect = 9.9
 Identities = 12/23 (52%), Positives = 15/23 (65%), Gaps = 2/23 (8%)
 Frame = +1

Query: 517 QWPLKDKKSPPWSRKPP--TKEE 579
           +W L +K+ P W RKP   TKEE
Sbjct: 259 EWSLVNKQKPIWMRKPEEITKEE 281


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,843,427
Number of Sequences: 37544
Number of extensions: 381581
Number of successful extensions: 1067
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 1039
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1065
length of database: 14,793,348
effective HSP length: 79
effective length of database: 11,827,372
effective search space used: 1644004708
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)