Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fe100P05_F_K03
         (657 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ277892-2|CAD12456.1|30017|Homo sapiens Titin protein.                33   0.68 
X90569-1|CAA62189.1| 7962|Homo sapiens elastic titin protein.          33   0.90 
AF525413-1|AAP80791.1|  962|Homo sapiens cardiac titin N2BA isof...    33   0.90 
BC032586-1|AAH32586.1|  363|Homo sapiens MXD3 protein protein.         31   3.6  

>AJ277892-2|CAD12456.1|30017|Homo sapiens Titin protein.
          Length = 30000

 Score = 33.5 bits (73), Expect = 0.68
 Identities = 28/89 (31%), Positives = 42/89 (47%), Gaps = 4/89 (4%)
 Frame = +1

Query: 397   TLSTKTTAKPVIIP-SDVPLPLIVERNLTA--VSPSLQPFLNLQWPLKDKKSPPWSRKPP 567
             T   K   KP  IP S VP+P +  R +    + P + P + L  P  ++K PP  R   
Sbjct: 9852  TKEIKLELKPPDIPDSRVPIPTMPIRAVPPEEIPPVVAPPIPLLLPTPEEKKPPPKRIEV 9911

Query: 568   TKEEIDDAVLKGKAALKELI-KVENLRKP 651
             TK+ +     K  A  KE+  + E ++KP
Sbjct: 9912  TKKAVKKDAKKVVAKPKEMTPREEIVKKP 9940


>X90569-1|CAA62189.1| 7962|Homo sapiens elastic titin protein.
          Length = 7962

 Score = 33.1 bits (72), Expect = 0.90
 Identities = 28/89 (31%), Positives = 42/89 (47%), Gaps = 4/89 (4%)
 Frame = +1

Query: 397  TLSTKTTAKPVIIP-SDVPLPLIVERNLTA--VSPSLQPFLNLQWPLKDKKSPPWSRKPP 567
            T   K   KP  IP S VP+P +  R +    + P + P + L  P  ++K PP  R   
Sbjct: 5590 TKEIKLELKPPDIPDSRVPIPTMPIRAVPPEEIPPVVAPPVPLLLPTPEEKKPPPKRIEV 5649

Query: 568  TKEEIDDAVLKGKAALKELI-KVENLRKP 651
            TK+ +     K  A  KE+  + E ++KP
Sbjct: 5650 TKKAVKKDAKKVVAKPKEMTPREEIVKKP 5678


>AF525413-1|AAP80791.1|  962|Homo sapiens cardiac titin N2BA isoform
           protein.
          Length = 962

 Score = 33.1 bits (72), Expect = 0.90
 Identities = 28/89 (31%), Positives = 42/89 (47%), Gaps = 4/89 (4%)
 Frame = +1

Query: 397 TLSTKTTAKPVIIP-SDVPLPLIVERNLTA--VSPSLQPFLNLQWPLKDKKSPPWSRKPP 567
           T   K   KP  IP S VP+P +  R +    + P + P + L  P  ++K PP  R   
Sbjct: 47  TKEIKLELKPPDIPDSRVPIPTMPIRAVPPEEIPPVVAPPVPLLLPTPEEKKPPPKRIEV 106

Query: 568 TKEEIDDAVLKGKAALKELI-KVENLRKP 651
           TK+ +     K  A  KE+  + E ++KP
Sbjct: 107 TKKAVKKDAKKVVAKPKEMTPREEIVKKP 135


>BC032586-1|AAH32586.1|  363|Homo sapiens MXD3 protein protein.
          Length = 363

 Score = 31.1 bits (67), Expect = 3.6
 Identities = 17/42 (40%), Positives = 20/42 (47%), Gaps = 1/42 (2%)
 Frame = -3

Query: 331 PIVKSRGWR*VQRIWHIESAVIASGICGPHRS-RTRTPAAPG 209
           P+   R WR + R W +       G   P RS  TRT AAPG
Sbjct: 190 PLPAQRSWRWMWRAWCLGVRPSCCGASSPARSTATRTAAAPG 231


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 95,830,914
Number of Sequences: 237096
Number of extensions: 2038319
Number of successful extensions: 9260
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 8923
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9249
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 7366354010
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)