Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fe100P05_F_K03
         (657 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z77666-12|CAJ43911.2|  896|Caenorhabditis elegans Hypothetical p...    30   1.7  
Z77666-9|CAJ43912.1|  541|Caenorhabditis elegans Hypothetical pr...    30   1.7  
Z77666-8|CAJ43910.1|  493|Caenorhabditis elegans Hypothetical pr...    30   1.7  
Z77666-7|CAB01228.1| 1221|Caenorhabditis elegans Hypothetical pr...    30   1.7  
Z68217-1|CAA92465.1|  461|Caenorhabditis elegans Hypothetical pr...    30   1.7  
U80031-6|AAB37618.2|  491|Caenorhabditis elegans Hypothetical pr...    28   6.7  
AF098999-4|AAC68729.1|  659|Caenorhabditis elegans Hypothetical ...    27   8.9  

>Z77666-12|CAJ43911.2|  896|Caenorhabditis elegans Hypothetical
           protein K08E7.5c protein.
          Length = 896

 Score = 29.9 bits (64), Expect = 1.7
 Identities = 15/37 (40%), Positives = 19/37 (51%)
 Frame = +1

Query: 385 NGTETLSTKTTAKPVIIPSDVPLPLIVERNLTAVSPS 495
           +G E+   KTT+KP   P+  P    VE     VSPS
Sbjct: 103 SGAESGPKKTTSKPATTPTPEPTTTPVEEEKVKVSPS 139


>Z77666-9|CAJ43912.1|  541|Caenorhabditis elegans Hypothetical
           protein K08E7.5d protein.
          Length = 541

 Score = 29.9 bits (64), Expect = 1.7
 Identities = 15/37 (40%), Positives = 19/37 (51%)
 Frame = +1

Query: 385 NGTETLSTKTTAKPVIIPSDVPLPLIVERNLTAVSPS 495
           +G E+   KTT+KP   P+  P    VE     VSPS
Sbjct: 62  SGAESGPKKTTSKPATTPTPEPTTTPVEEEKVKVSPS 98


>Z77666-8|CAJ43910.1|  493|Caenorhabditis elegans Hypothetical
           protein K08E7.5b protein.
          Length = 493

 Score = 29.9 bits (64), Expect = 1.7
 Identities = 15/37 (40%), Positives = 19/37 (51%)
 Frame = +1

Query: 385 NGTETLSTKTTAKPVIIPSDVPLPLIVERNLTAVSPS 495
           +G E+   KTT+KP   P+  P    VE     VSPS
Sbjct: 62  SGAESGPKKTTSKPATTPTPEPTTTPVEEEKVKVSPS 98


>Z77666-7|CAB01228.1| 1221|Caenorhabditis elegans Hypothetical
           protein K08E7.5a protein.
          Length = 1221

 Score = 29.9 bits (64), Expect = 1.7
 Identities = 15/37 (40%), Positives = 19/37 (51%)
 Frame = +1

Query: 385 NGTETLSTKTTAKPVIIPSDVPLPLIVERNLTAVSPS 495
           +G E+   KTT+KP   P+  P    VE     VSPS
Sbjct: 62  SGAESGPKKTTSKPATTPTPEPTTTPVEEEKVKVSPS 98


>Z68217-1|CAA92465.1|  461|Caenorhabditis elegans Hypothetical
           protein F58G6.1 protein.
          Length = 461

 Score = 29.9 bits (64), Expect = 1.7
 Identities = 13/44 (29%), Positives = 26/44 (59%), Gaps = 1/44 (2%)
 Frame = +1

Query: 379 NENGTETLSTKTTAKPVIIPSDVPLPLIVER-NLTAVSPSLQPF 507
           ++N ++  S + T  P ++PS VP P+   R ++ +++ S  PF
Sbjct: 266 DQNKSDNSSLRQTPSPSVLPSPVPAPMAKPRESVVSMANSTNPF 309


>U80031-6|AAB37618.2|  491|Caenorhabditis elegans Hypothetical
           protein B0554.7 protein.
          Length = 491

 Score = 27.9 bits (59), Expect = 6.7
 Identities = 12/25 (48%), Positives = 16/25 (64%)
 Frame = -1

Query: 171 GKSKGNSSCINYLNNHSHKRSIINN 97
           GK+  N  C  YL +HS +RSI +N
Sbjct: 117 GKAFFNLGCTTYLTSHSTRRSIESN 141


>AF098999-4|AAC68729.1|  659|Caenorhabditis elegans Hypothetical
           protein W04C9.6 protein.
          Length = 659

 Score = 27.5 bits (58), Expect = 8.9
 Identities = 20/68 (29%), Positives = 34/68 (50%), Gaps = 2/68 (2%)
 Frame = +1

Query: 400 LSTKTTAKPVIIPSDVPLPLIVERNLTAVSPSLQPFLNLQWPLKDK--KSPPWSRKPPTK 573
           L    +  P + P   P+P IV  + +A+S S+Q  L  Q    +   ++P W R+ P  
Sbjct: 532 LQMMASQTPSMAPLPPPMPPIVGSS-SAIS-SIQNLLEKQQNQYETAPETPRWDRQEPEY 589

Query: 574 EEIDDAVL 597
           + ID+ V+
Sbjct: 590 QHIDEQVV 597


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,120,961
Number of Sequences: 27780
Number of extensions: 318556
Number of successful extensions: 1124
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 1068
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1123
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1465835342
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)