Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fe100P05_F_K02
         (652 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

03_02_0026 - 5086596-5086755,5087035-5087105,5087407-5087466,508...    90   1e-18
08_01_0319 + 2848751-2848762,2849516-2850449,2850476-2851234,285...    29   4.2  
01_03_0076 - 12241408-12241545,12241719-12241790,12242173-122422...    28   7.4  
10_05_0068 + 8774712-8774787,8774812-8774852,8774895-8775743,877...    27   9.8  
07_01_1167 + 11030200-11031165,11031273-11031407,11031509-11031874     27   9.8  
07_01_0068 - 495582-497981                                             27   9.8  

>03_02_0026 -
           5086596-5086755,5087035-5087105,5087407-5087466,
           5087625-5087684,5088012-5088054,5088130-5088221,
           5088304-5088372,5088458-5088502,5089209-5089317,
           5089579-5089679,5089769-5089861,5089936-5089996,
           5090084-5090187,5091592-5091972
          Length = 482

 Score = 90.2 bits (214), Expect = 1e-18
 Identities = 47/106 (44%), Positives = 64/106 (60%)
 Frame = +2

Query: 275 AIVNENVSLVISRQLLTDVSTHLALLADNVSQEVSHFALDVIQPRVISFEEQVAXIXXHL 454
           A+V++ V LV+SRQLL   +  L  L     +EV+H+AL  IQPRV+SFEEQV  I   L
Sbjct: 76  AVVSDEVPLVVSRQLLQTFAQELGRLEPEAQKEVAHYALTQIQPRVVSFEEQVVVIREKL 135

Query: 455 XXIYXRXXXWXEAANVLXGIPLETGQKQYSVDYKLETYLKIARLYL 592
             +Y     W +AA +L GI L++G +      KL   ++IARLYL
Sbjct: 136 AELYESEQQWSKAAQMLSGIDLDSGIRMLDDTNKLSKCVQIARLYL 181



 Score = 29.5 bits (63), Expect = 2.4
 Identities = 13/19 (68%), Positives = 15/19 (78%)
 Frame = +3

Query: 591 LEVDDPVQAEAFVNRASLL 647
           LE DD V AEAF+N+AS L
Sbjct: 181 LEDDDSVNAEAFINKASFL 199


>08_01_0319 +
           2848751-2848762,2849516-2850449,2850476-2851234,
           2851793-2851850,2851900-2852179
          Length = 680

 Score = 28.7 bits (61), Expect = 4.2
 Identities = 12/31 (38%), Positives = 15/31 (48%)
 Frame = +3

Query: 345 HCWLIMFHRRFPTLHLMLYNPELFHLKNRWP 437
           H WL++ H    T   ML   +LFHL    P
Sbjct: 481 HVWLLLAHAGMETFPEMLQRRQLFHLPTEEP 511


>01_03_0076 -
           12241408-12241545,12241719-12241790,12242173-12242289,
           12243307-12245127,12245361-12245810
          Length = 865

 Score = 27.9 bits (59), Expect = 7.4
 Identities = 11/34 (32%), Positives = 19/34 (55%)
 Frame = -3

Query: 632 VDECLSLHRIVHFQGTVWLSLGTFPVCNQLNIVS 531
           +DECL    + H QG++   + T P   ++ I+S
Sbjct: 271 IDECLDEAHLQHLQGSLHAFVDTLPPTARIGIIS 304


>10_05_0068 +
           8774712-8774787,8774812-8774852,8774895-8775743,
           8776210-8776582,8776814-8777484
          Length = 669

 Score = 27.5 bits (58), Expect = 9.8
 Identities = 20/78 (25%), Positives = 36/78 (46%), Gaps = 2/78 (2%)
 Frame = -2

Query: 336 VLTSVKSCLEITRLTFSLTIASMNAF--NDSDNSCSVLFSISIRTLRYFSA*SLCKPPEF 163
           ++ S+      TRL  S  ++ ++ F  N  D+    L     R +RY    ++     +
Sbjct: 569 IIGSLMYLASATRLDISFAVSKLSRFTSNPGDDHWRALE----RVMRYLKG-TMELGLHY 623

Query: 162 LNSLKYWRTLCKLTGILI 109
           +  L+YWR +  LTG L+
Sbjct: 624 IGILRYWRVIVILTGSLM 641


>07_01_1167 + 11030200-11031165,11031273-11031407,11031509-11031874
          Length = 488

 Score = 27.5 bits (58), Expect = 9.8
 Identities = 11/25 (44%), Positives = 15/25 (60%)
 Frame = -3

Query: 206 CDTFQLDLYANHPNFSTRLSTGEHF 132
           CD + +D Y NH   S +LS G+ F
Sbjct: 462 CDGYFMDYYYNHSQRSHQLSVGDPF 486


>07_01_0068 - 495582-497981
          Length = 799

 Score = 27.5 bits (58), Expect = 9.8
 Identities = 20/79 (25%), Positives = 37/79 (46%), Gaps = 2/79 (2%)
 Frame = +2

Query: 146 YLSELRN--SGGLHKDQAEKYRNVLMEILKSTEQELSESLKAFIEAIVNENVSLVISRQL 319
           YL +LR     G   D    +RN+ ME+ K+T +EL+      +     E+ S    ++ 
Sbjct: 508 YLKKLRGYRGEGTLLDDEGLFRNIKMELTKATREELN------LRLTEEESSSSTTKKKE 561

Query: 320 LTDVSTHLALLADNVSQEV 376
             +++  +  LAD   +E+
Sbjct: 562 AEEITHDVLQLADKKKKEI 580


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,649,032
Number of Sequences: 37544
Number of extensions: 249193
Number of successful extensions: 616
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 602
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 616
length of database: 14,793,348
effective HSP length: 79
effective length of database: 11,827,372
effective search space used: 1620349964
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)