Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fe100P05_F_K02
         (652 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U23452-4|ABE73334.1| 1316|Caenorhabditis elegans Hypothetical pr...    41   9e-04
U23452-3|AAU87818.1| 1982|Caenorhabditis elegans Hypothetical pr...    41   9e-04
U23452-2|AAU87819.1| 1987|Caenorhabditis elegans Hypothetical pr...    41   9e-04
Z73424-4|CAA97778.2|  954|Caenorhabditis elegans Hypothetical pr...    32   0.41 
U58726-1|AAB00575.2|  215|Caenorhabditis elegans Hypothetical pr...    29   2.9  

>U23452-4|ABE73334.1| 1316|Caenorhabditis elegans Hypothetical
           protein R07G3.3c protein.
          Length = 1316

 Score = 40.7 bits (91), Expect = 9e-04
 Identities = 30/96 (31%), Positives = 49/96 (51%), Gaps = 7/96 (7%)
 Frame = +2

Query: 107 EIKMPVNLQSV-RQYLSELRNSGGLHKDQAEKYRNVLME---ILKSTEQELSESLKAFIE 274
           EI+    LQ V +  + E +N+  L KDQ E   NVL+E   +L+  + E+     A  +
Sbjct: 259 EIRCQTELQRVMKSSMEESKNAADLFKDQLEAQENVLVEVRKVLQEHQDEMERENLAHAD 318

Query: 275 AIVNENVSLVISRQLLTDVSTHLALLAD---NVSQE 373
           AI + +  L  +R  L  V+  +  ++D   NVS+E
Sbjct: 319 AIKHRDEELAQTRAELVKVTEMMKSMSDVKLNVSEE 354


>U23452-3|AAU87818.1| 1982|Caenorhabditis elegans Hypothetical
           protein R07G3.3a protein.
          Length = 1982

 Score = 40.7 bits (91), Expect = 9e-04
 Identities = 30/96 (31%), Positives = 49/96 (51%), Gaps = 7/96 (7%)
 Frame = +2

Query: 107 EIKMPVNLQSV-RQYLSELRNSGGLHKDQAEKYRNVLME---ILKSTEQELSESLKAFIE 274
           EI+    LQ V +  + E +N+  L KDQ E   NVL+E   +L+  + E+     A  +
Sbjct: 259 EIRCQTELQRVMKSSMEESKNAADLFKDQLEAQENVLVEVRKVLQEHQDEMERENLAHAD 318

Query: 275 AIVNENVSLVISRQLLTDVSTHLALLAD---NVSQE 373
           AI + +  L  +R  L  V+  +  ++D   NVS+E
Sbjct: 319 AIKHRDEELAQTRAELVKVTEMMKSMSDVKLNVSEE 354


>U23452-2|AAU87819.1| 1987|Caenorhabditis elegans Hypothetical
           protein R07G3.3b protein.
          Length = 1987

 Score = 40.7 bits (91), Expect = 9e-04
 Identities = 30/96 (31%), Positives = 49/96 (51%), Gaps = 7/96 (7%)
 Frame = +2

Query: 107 EIKMPVNLQSV-RQYLSELRNSGGLHKDQAEKYRNVLME---ILKSTEQELSESLKAFIE 274
           EI+    LQ V +  + E +N+  L KDQ E   NVL+E   +L+  + E+     A  +
Sbjct: 259 EIRCQTELQRVMKSSMEESKNAADLFKDQLEAQENVLVEVRKVLQEHQDEMERENLAHAD 318

Query: 275 AIVNENVSLVISRQLLTDVSTHLALLAD---NVSQE 373
           AI + +  L  +R  L  V+  +  ++D   NVS+E
Sbjct: 319 AIKHRDEELAQTRAELVKVTEMMKSMSDVKLNVSEE 354


>Z73424-4|CAA97778.2|  954|Caenorhabditis elegans Hypothetical
           protein C44B9.1 protein.
          Length = 954

 Score = 31.9 bits (69), Expect = 0.41
 Identities = 18/43 (41%), Positives = 27/43 (62%), Gaps = 2/43 (4%)
 Frame = +2

Query: 191 AEKYRNVLM--EILKSTEQELSESLKAFIEAIVNENVSLVISR 313
           +EKYR V    E+L+ TEQ   + L AF+EAI     ++V+S+
Sbjct: 273 SEKYRFVYTAYEMLEKTEQVAEKLLTAFVEAIETTTSAVVLSK 315


>U58726-1|AAB00575.2|  215|Caenorhabditis elegans Hypothetical
           protein T01C8.3 protein.
          Length = 215

 Score = 29.1 bits (62), Expect = 2.9
 Identities = 13/37 (35%), Positives = 16/37 (43%)
 Frame = -2

Query: 405 GCITSSAKWETSCETLSASSAKCVLTSVKSCLEITRL 295
           GC TS       C T S  S  C+  S   C E+T +
Sbjct: 7   GCFTSPTDLPLGCSTNSRGSIFCICNSTDYCNEMTNV 43


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,203,892
Number of Sequences: 27780
Number of extensions: 244024
Number of successful extensions: 689
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 665
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 689
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1444744186
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)