Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fe100P05_F_J20
         (651 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

10_01_0240 - 2506901-2507008,2507950-2508322,2508418-2508612,250...   121   4e-28
01_06_0065 + 26107522-26107700,26110875-26111253                       28   5.6  
10_08_0355 - 17131178-17131268,17131376-17131429,17131521-171316...    28   7.4  
01_07_0154 - 41532220-41533252,41533786-41533971,41534759-415350...    27   9.8  

>10_01_0240 -
           2506901-2507008,2507950-2508322,2508418-2508612,
           2508771-2508885,2510027-2510132,2510253-2510366,
           2510521-2510538
          Length = 342

 Score =  121 bits (292), Expect = 4e-28
 Identities = 61/115 (53%), Positives = 81/115 (70%), Gaps = 2/115 (1%)
 Frame = +2

Query: 77  LESTMICVDNSDYMRNGDFLPTRLQAQQDAVNLVCHSKTRSNPENNVGLLTLA--NVEVL 250
           LE+T+ICVD+S++MRNGD+ PTRLQAQ+DA NLV  +K  SNPEN VG+L +A   V VL
Sbjct: 5   LEATVICVDDSEWMRNGDYPPTRLQAQEDAANLVVGTKMTSNPENTVGVLAMAGDRVRVL 64

Query: 251 ATLTSDVGRIMSKLHRVQPNGDINLLTGIRIAHLALKHRQGKNHKMRIVVFVGSP 415
              TSD  + ++ +H ++ +G+ NL   + IA L LK+R  K    RIVVFVGSP
Sbjct: 65  LAPTSDPVKFLACMHGLEASGEANLTATLNIAELVLKNRPDKRLSQRIVVFVGSP 119



 Score = 32.7 bits (71), Expect = 0.26
 Identities = 16/32 (50%), Positives = 20/32 (62%)
 Frame = +3

Query: 426 DEKELVKLAKRLKKEKVNCDVVSFGEDSENNP 521
           DEK L  + K+LKK  V+ DVV FGE  +  P
Sbjct: 122 DEK-LETIGKKLKKYNVSLDVVEFGESDDEKP 152


>01_06_0065 + 26107522-26107700,26110875-26111253
          Length = 185

 Score = 28.3 bits (60), Expect = 5.6
 Identities = 9/16 (56%), Positives = 9/16 (56%)
 Frame = +3

Query: 582 PCVCAXWRLCCASEAL 629
           PC C  WRLCC    L
Sbjct: 20  PCPCPAWRLCCTPARL 35


>10_08_0355 -
           17131178-17131268,17131376-17131429,17131521-17131663,
           17131812-17132096,17132168-17132301,17132383-17132556,
           17132639-17132707,17132814-17132878,17133441-17133589,
           17133747-17133989,17134119-17134255,17134340-17134561,
           17134661-17134827,17136680-17136819
          Length = 690

 Score = 27.9 bits (59), Expect = 7.4
 Identities = 19/54 (35%), Positives = 23/54 (42%)
 Frame = +3

Query: 486 VVSFGEDSENNPLLTTFVNTLNGKDTSTGGKSPCVCAXWRLCCASEALITSPLI 647
           VV+ G D+   PL+ T  N   GK    G K  C       C   +A I  PLI
Sbjct: 553 VVAIGRDTRLGPLMATIGNVKRGK---KGCKLDCKDLKLSTCKIKKAGIGGPLI 603


>01_07_0154 -
           41532220-41533252,41533786-41533971,41534759-41535039,
           41535184-41535318,41535427-41535573,41535841-41536010,
           41536110-41536197,41536999-41537219,41537725-41537810,
           41537916-41537962
          Length = 797

 Score = 27.5 bits (58), Expect = 9.8
 Identities = 13/39 (33%), Positives = 25/39 (64%), Gaps = 2/39 (5%)
 Frame = +2

Query: 50  VC*KNTKMVLESTM--ICVDNSDYMRNGDFLPTRLQAQQ 160
           +C ++  + L S++  I  D+S Y  NG+FLP + +A++
Sbjct: 331 ICYESEILELASSLGVIMKDDSGYWINGEFLPNKAEAEK 369


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,018,520
Number of Sequences: 37544
Number of extensions: 342682
Number of successful extensions: 718
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 704
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 717
length of database: 14,793,348
effective HSP length: 79
effective length of database: 11,827,372
effective search space used: 1620349964
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)