BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fe100P05_F_J17
(570 letters)
Database: mosquito
2352 sequences; 563,979 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY183375-1|AAO24765.1| 679|Anopheles gambiae NADPH cytochrome P... 32 0.015
AJ441131-1|CAD29630.1| 567|Anopheles gambiae putative chitin bi... 24 3.0
AF281078-1|AAF82131.1| 2051|Anopheles gambiae vitellogenin 1 pro... 23 5.3
AY146756-1|AAO12071.1| 282|Anopheles gambiae odorant-binding pr... 23 7.0
DQ370045-1|ABD18606.1| 285|Anopheles gambiae putative TIL domai... 23 9.3
AY146759-1|AAO12074.1| 356|Anopheles gambiae odorant-binding pr... 23 9.3
>AY183375-1|AAO24765.1| 679|Anopheles gambiae NADPH cytochrome P450
reductase protein.
Length = 679
Score = 31.9 bits (69), Expect = 0.015
Identities = 14/31 (45%), Positives = 17/31 (54%), Gaps = 1/31 (3%)
Frame = -1
Query: 237 KQPYPCPLFDKNILRHYQEVQTLTR-HFSKE 148
K P+PCP + L HY E+ L R H KE
Sbjct: 361 KHPFPCPTTYRTALTHYLEITALPRTHILKE 391
>AJ441131-1|CAD29630.1| 567|Anopheles gambiae putative chitin
binding protein protein.
Length = 567
Score = 24.2 bits (50), Expect = 3.0
Identities = 8/14 (57%), Positives = 13/14 (92%)
Frame = +3
Query: 294 APNRQIIYQQEKMQ 335
APN+QIIY+++ +Q
Sbjct: 187 APNQQIIYKEQNLQ 200
>AF281078-1|AAF82131.1| 2051|Anopheles gambiae vitellogenin 1
protein.
Length = 2051
Score = 23.4 bits (48), Expect = 5.3
Identities = 10/29 (34%), Positives = 14/29 (48%)
Frame = +3
Query: 336 YDSHQFTALASGDYKVCFSNEFSTFSHKL 422
Y + F LA DYK+ F+H+L
Sbjct: 700 YPVYSFGRLADADYKIVAHKVVPWFAHQL 728
>AY146756-1|AAO12071.1| 282|Anopheles gambiae odorant-binding
protein AgamOBP40 protein.
Length = 282
Score = 23.0 bits (47), Expect = 7.0
Identities = 11/41 (26%), Positives = 15/41 (36%)
Frame = -3
Query: 454 CSGPTFSSIYTSLCENVLNSLLKHTL*SPDARAVNWCESYC 332
C P F + E V+ L T + R WC + C
Sbjct: 233 CLRPDFEQFFIRNRETVMQHFLYKTDQPAEDRQPPWCRTMC 273
>DQ370045-1|ABD18606.1| 285|Anopheles gambiae putative TIL domain
protein protein.
Length = 285
Score = 22.6 bits (46), Expect = 9.3
Identities = 12/35 (34%), Positives = 17/35 (48%), Gaps = 3/35 (8%)
Frame = +2
Query: 434 TKCWTGAASSWCRRSCN---CSYTVGDICRRNSFC 529
T C A C +CN CS ++CRR+ +C
Sbjct: 208 TTCGRNEALQACG-TCNQITCSGISTEVCRRSCYC 241
Score = 22.6 bits (46), Expect = 9.3
Identities = 11/24 (45%), Positives = 14/24 (58%)
Frame = +2
Query: 446 TGAASSWCRRSCNCSYTVGDICRR 517
+G ++ CRRSC C G CRR
Sbjct: 228 SGISTEVCRRSCYC----GCQCRR 247
>AY146759-1|AAO12074.1| 356|Anopheles gambiae odorant-binding
protein AgamOBP45 protein.
Length = 356
Score = 22.6 bits (46), Expect = 9.3
Identities = 8/15 (53%), Positives = 11/15 (73%)
Frame = +2
Query: 191 CRRMFLSNNGQGYGC 235
C R+F+SNNG+ C
Sbjct: 328 CGRLFISNNGRVSCC 342
Database: mosquito
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 563,979
Number of sequences in database: 2352
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 606,360
Number of Sequences: 2352
Number of extensions: 12567
Number of successful extensions: 26
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 25
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 26
length of database: 563,979
effective HSP length: 61
effective length of database: 420,507
effective search space used: 53824896
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -