Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fe100P05_F_J17
(570 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
DQ494419-1|ABF55370.1| 127|Apis mellifera telomerase reverse tr... 23 2.1
DQ494418-1|ABF55369.1| 110|Apis mellifera telomerase reverse tr... 23 2.1
EF540769-1|ABQ14707.1| 620|Apis mellifera adenosine deaminase p... 23 2.8
EF625896-1|ABR45903.1| 683|Apis mellifera hexamerin protein. 22 4.9
AY601637-1|AAT11850.1| 683|Apis mellifera hexamerin 70b protein. 22 4.9
AF134821-1|AAD40236.1| 226|Apis mellifera hexamerin protein. 22 4.9
>DQ494419-1|ABF55370.1| 127|Apis mellifera telomerase reverse
transcriptase protein.
Length = 127
Score = 23.0 bits (47), Expect = 2.1
Identities = 11/46 (23%), Positives = 24/46 (52%)
Frame = -2
Query: 503 LQLCKNSCMISYTRKRLLRSNI*FHIHKFM*KCTKLITKTHFVITR 366
+++ K C++ R +L ++ ++H + K+I T+ ITR
Sbjct: 30 MRILKEVCVLQANRACILIKDLFDNVHNHIQNIFKIIKSTNEKITR 75
>DQ494418-1|ABF55369.1| 110|Apis mellifera telomerase reverse
transcriptase protein.
Length = 110
Score = 23.0 bits (47), Expect = 2.1
Identities = 11/46 (23%), Positives = 24/46 (52%)
Frame = -2
Query: 503 LQLCKNSCMISYTRKRLLRSNI*FHIHKFM*KCTKLITKTHFVITR 366
+++ K C++ R +L ++ ++H + K+I T+ ITR
Sbjct: 13 MRILKEVCVLQANRACILIKDLFDNVHNHIQNIFKIIKSTNEKITR 58
>EF540769-1|ABQ14707.1| 620|Apis mellifera adenosine deaminase
protein.
Length = 620
Score = 22.6 bits (46), Expect = 2.8
Identities = 8/23 (34%), Positives = 14/23 (60%)
Frame = -1
Query: 210 DKNILRHYQEVQTLTRHFSKEHH 142
DKN RHY + ++ +++S H
Sbjct: 570 DKNQCRHYLDAKSSVQNYSLAKH 592
>EF625896-1|ABR45903.1| 683|Apis mellifera hexamerin protein.
Length = 683
Score = 21.8 bits (44), Expect = 4.9
Identities = 11/37 (29%), Positives = 17/37 (45%)
Frame = +3
Query: 450 EQPLPGVGDHATVLTQLETSAEEIHSALNRIIDHQTH 560
E PGV + + +L T + S LN + Q+H
Sbjct: 442 ELNFPGVSIESVTVDKLITYFDHFESMLNNGVSIQSH 478
>AY601637-1|AAT11850.1| 683|Apis mellifera hexamerin 70b protein.
Length = 683
Score = 21.8 bits (44), Expect = 4.9
Identities = 11/37 (29%), Positives = 17/37 (45%)
Frame = +3
Query: 450 EQPLPGVGDHATVLTQLETSAEEIHSALNRIIDHQTH 560
E PGV + + +L T + S LN + Q+H
Sbjct: 442 ELNFPGVSIESVTVDKLITYFDHFESMLNNGVSIQSH 478
>AF134821-1|AAD40236.1| 226|Apis mellifera hexamerin protein.
Length = 226
Score = 21.8 bits (44), Expect = 4.9
Identities = 11/37 (29%), Positives = 17/37 (45%)
Frame = +3
Query: 450 EQPLPGVGDHATVLTQLETSAEEIHSALNRIIDHQTH 560
E PGV + + +L T + S LN + Q+H
Sbjct: 68 ELNFPGVSIESVTVDKLITYFDHFESMLNNGVSIQSH 104
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 156,481
Number of Sequences: 438
Number of extensions: 3343
Number of successful extensions: 9
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 16381902
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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