Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fe100P05_F_J16
         (650 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB204559-1|BAD89804.1|  832|Apis mellifera soluble guanylyl cycl...    23   1.9  
Z26318-1|CAA81227.1|  544|Apis mellifera royal jelly protein RJP...    23   3.4  
EF625898-1|ABR45905.1|  686|Apis mellifera hexamerin protein.          21   7.8  
EF589162-1|ABQ84439.1|  686|Apis mellifera hexamerin 70c protein.      21   7.8  

>AB204559-1|BAD89804.1|  832|Apis mellifera soluble guanylyl cyclase
           beta-3 protein.
          Length = 832

 Score = 23.4 bits (48), Expect = 1.9
 Identities = 12/32 (37%), Positives = 20/32 (62%), Gaps = 4/32 (12%)
 Frame = +2

Query: 5   LRSPYFVGE----QSVQLNYRRPRRKGVHYSL 88
           +R+P F+ E    Q + L+YR  RR  V+Y++
Sbjct: 114 MRAPSFICENETRQGLTLHYRSKRRGFVYYTM 145


>Z26318-1|CAA81227.1|  544|Apis mellifera royal jelly protein
           RJP57-1 protein.
          Length = 544

 Score = 22.6 bits (46), Expect = 3.4
 Identities = 9/18 (50%), Positives = 13/18 (72%)
 Frame = -2

Query: 301 VDRFNFLSILDSSNINKN 248
           VD+F+ L +LDS  +N N
Sbjct: 135 VDKFDRLWVLDSGLVNNN 152


>EF625898-1|ABR45905.1|  686|Apis mellifera hexamerin protein.
          Length = 686

 Score = 21.4 bits (43), Expect = 7.8
 Identities = 7/22 (31%), Positives = 12/22 (54%)
 Frame = -1

Query: 164 RKYNSPYYTIVYLAVNTQLKTF 99
           R+YN P Y + Y   + +L  +
Sbjct: 212 REYNDPEYKLDYFMEDVELNAY 233


>EF589162-1|ABQ84439.1|  686|Apis mellifera hexamerin 70c protein.
          Length = 686

 Score = 21.4 bits (43), Expect = 7.8
 Identities = 7/22 (31%), Positives = 12/22 (54%)
 Frame = -1

Query: 164 RKYNSPYYTIVYLAVNTQLKTF 99
           R+YN P Y + Y   + +L  +
Sbjct: 212 REYNDPEYKLDYFMEDVELNAY 233


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 186,484
Number of Sequences: 438
Number of extensions: 4224
Number of successful extensions: 8
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 19682733
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)