Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fe100P05_F_J15
(666 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC7D4.07c |trx1||cytosolic thioredoxin Trx1 |Schizosaccharomyc... 72 7e-14
SPBC12D12.07c |trx2||mitochondrial thioredoxin Trx2|Schizosaccha... 57 3e-09
SPBC577.08c |txl1|trx3|thioredoxin-like I protein Txl1|Schizosac... 56 5e-09
SPAC1F5.02 |||protein disulfide isomerase|Schizosaccharomyces po... 52 7e-08
SPBC26H8.06 |grx4||glutaredoxin Grx4|Schizosaccharomyces pombe|c... 47 2e-06
SPAC17H9.14c |||protein disulfide isomerase|Schizosaccharomyces ... 42 8e-05
SPAC13F5.05 |||thioredoxin family protein|Schizosaccharomyces po... 32 0.085
SPBC3D6.13c |||protein disulfide isomerase |Schizosaccharomyces ... 29 0.46
SPAPB21F2.02 |||Dopey family protein|Schizosaccharomyces pombe|c... 29 0.80
SPAC1786.03 |cut11|SPAC24C9.01|integral membrane nucleoporin|Sch... 28 1.4
SPAC27D7.03c |mei2||RNA-binding protein involved in meiosis Mei2... 27 1.8
SPAC1A6.10 ||SPAC30D11.15c|Moeb/ThiF domain|Schizosaccharomyces ... 27 2.4
SPAC24B11.12c |||P-type ATPase |Schizosaccharomyces pombe|chr 1|... 26 4.2
SPMIT.02 |||mitochondrial DNA binding endonuclease|Schizosacchar... 26 5.6
SPAC167.07c ||SPAC57A7.03c|ubiquitin-protein ligase E3 |Schizosa... 25 7.4
SPBC947.10 |||ubiquitin-protein ligase E3 |Schizosaccharomyces p... 25 7.4
SPBP4H10.15 |||aconitate hydratase|Schizosaccharomyces pombe|chr... 25 9.8
SPAC29E6.07 ||SPAC30.11|sequence orphan|Schizosaccharomyces pomb... 25 9.8
>SPAC7D4.07c |trx1||cytosolic thioredoxin Trx1 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 103
Score = 72.1 bits (169), Expect = 7e-14
Identities = 34/90 (37%), Positives = 51/90 (56%)
Frame = +1
Query: 112 IKDSDDLKTRLAEAGDKLVVIDFMATWCGPCKMIGPKLDEIAAEMXXXXXXXXXXXXXXX 291
+ DS + K+ + + DKLVV+DF ATWCGPCK I PK ++ +
Sbjct: 5 VSDSSEFKSIVCQ--DKLVVVDFFATWCGPCKAIAPKFEQF-SNTYSDATFIKVDVDQLS 61
Query: 292 XXASEYNINSMPTFVFVKNGKKLDEFSGAN 381
A+E +++MP+F KNG+K++E GAN
Sbjct: 62 EIAAEAGVHAMPSFFLYKNGEKIEEIVGAN 91
>SPBC12D12.07c |trx2||mitochondrial thioredoxin
Trx2|Schizosaccharomyces pombe|chr 2|||Manual
Length = 121
Score = 56.8 bits (131), Expect = 3e-09
Identities = 28/91 (30%), Positives = 47/91 (51%)
Frame = +1
Query: 112 IKDSDDLKTRLAEAGDKLVVIDFMATWCGPCKMIGPKLDEIAAEMXXXXXXXXXXXXXXX 291
++ D TR++ DK+ V+DF A WCGPCK + P L+++ +E
Sbjct: 22 VESFGDYNTRIS--ADKVTVVDFYADWCGPCKYLKPFLEKL-SEQNQKASFIAVNADKFS 78
Query: 292 XXASEYNINSMPTFVFVKNGKKLDEFSGANV 384
A + + ++PT V + G++LD GA+V
Sbjct: 79 DIAQKNGVYALPTMVLFRKGQELDRIVGADV 109
>SPBC577.08c |txl1|trx3|thioredoxin-like I protein
Txl1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 290
Score = 56.0 bits (129), Expect = 5e-09
Identities = 26/73 (35%), Positives = 38/73 (52%), Gaps = 1/73 (1%)
Frame = +1
Query: 166 VVIDFMATWCGPCKMIGPKLDEIAAEMXXXXXXXXXXXXXXXXX-ASEYNINSMPTFVFV 342
+ +D A WCGPCK I P ++A++ AS + +MPTFVF
Sbjct: 22 LAVDCYADWCGPCKAISPLFSQLASKYASPKFVFAKVNVDEQRQIASGLGVKAMPTFVFF 81
Query: 343 KNGKKLDEFSGAN 381
+NGK++D +GAN
Sbjct: 82 ENGKQIDMLTGAN 94
>SPAC1F5.02 |||protein disulfide isomerase|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 492
Score = 52.0 bits (119), Expect = 7e-08
Identities = 24/74 (32%), Positives = 37/74 (50%), Gaps = 1/74 (1%)
Frame = +1
Query: 157 DKLVVIDFMATWCGPCKMIGPKLDEIAAEM-XXXXXXXXXXXXXXXXXASEYNINSMPTF 333
DK++++ F A WCG CK + P+ + A E+ SEY+I PT
Sbjct: 39 DKVLMVKFYAPWCGHCKALAPEYESAADELEKDGISLVEVDCTEEGDLCSEYSIRGYPTL 98
Query: 334 VFVKNGKKLDEFSG 375
KNGK++ ++SG
Sbjct: 99 NVFKNGKQISQYSG 112
Score = 36.7 bits (81), Expect = 0.003
Identities = 19/68 (27%), Positives = 31/68 (45%)
Frame = +1
Query: 160 KLVVIDFMATWCGPCKMIGPKLDEIAAEMXXXXXXXXXXXXXXXXXASEYNINSMPTFVF 339
K V+++F A WCG CK + P +++A E S +I+ PT +F
Sbjct: 374 KDVLVEFYAPWCGHCKNLAPTYEKLAEEYSDDSNVVVAKIDATENDIS-VSISGFPTIMF 432
Query: 340 VKNGKKLD 363
K K++
Sbjct: 433 FKANDKVN 440
>SPBC26H8.06 |grx4||glutaredoxin Grx4|Schizosaccharomyces pombe|chr
2|||Manual
Length = 244
Score = 47.2 bits (107), Expect = 2e-06
Identities = 23/94 (24%), Positives = 42/94 (44%)
Frame = +1
Query: 100 MSIHIKDSDDLKTRLAEAGDKLVVIDFMATWCGPCKMIGPKLDEIAAEMXXXXXXXXXXX 279
MS+ I + + L +++++++F A W PCK + D+ A +
Sbjct: 1 MSVEITFVEQFQEILQNGKEQIILLNFYAPWAAPCKQMNQVFDQFAKD-TKNAVFLKIEA 59
Query: 280 XXXXXXASEYNINSMPTFVFVKNGKKLDEFSGAN 381
A +++N++P FV + K L SGAN
Sbjct: 60 EKFSDIAESFDVNAVPLFVLIHGAKVLARISGAN 93
>SPAC17H9.14c |||protein disulfide isomerase|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 359
Score = 41.9 bits (94), Expect = 8e-05
Identities = 25/94 (26%), Positives = 44/94 (46%), Gaps = 3/94 (3%)
Frame = +1
Query: 106 IHIKDSDDLKTRLAEAGDKLVVIDFMATWCGPCKMIGPKLDEIAA--EMXXXXXXXXXXX 279
+ ++ ++L+ + A K +I+F ATWCG CK + P +E+ A E
Sbjct: 23 VELQSLNELENTI-RASKKGALIEFYATWCGHCKSLAPVYEELGALFEDHNDVLIGKIDA 81
Query: 280 XXXXXXASEYNINSMPTFV-FVKNGKKLDEFSGA 378
A +Y+I PT + F +G + ++S A
Sbjct: 82 DTHSDVADKYHITGFPTLIWFPPDGSEPVQYSNA 115
Score = 30.3 bits (65), Expect = 0.26
Identities = 10/25 (40%), Positives = 16/25 (64%)
Frame = +1
Query: 160 KLVVIDFMATWCGPCKMIGPKLDEI 234
K V+++F A WCG CK + P + +
Sbjct: 159 KDVLVEFYADWCGYCKRLAPTYETL 183
>SPAC13F5.05 |||thioredoxin family protein|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 363
Score = 31.9 bits (69), Expect = 0.085
Identities = 22/90 (24%), Positives = 34/90 (37%), Gaps = 2/90 (2%)
Frame = +1
Query: 118 DSDDLKTRLAEAGDKLVVIDFMATWCGPCKMIGPKLDEIAAEMXXXXXXXXXXXXXXXXX 297
+S + + + G LVV F A WCG CK + P ++A+ +
Sbjct: 37 NSKNFRKFVKAKGPSLVV--FYAPWCGYCKKLVPTYQKLASNLHSLLPVTAVDCDADQNR 94
Query: 298 A--SEYNINSMPTFVFVKNGKKLDEFSGAN 381
A S+Y + PT V K S +
Sbjct: 95 AVCSQYQVQGFPTIKLVYPSSKGSSLSSTD 124
>SPBC3D6.13c |||protein disulfide isomerase |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 726
Score = 29.5 bits (63), Expect = 0.46
Identities = 18/61 (29%), Positives = 26/61 (42%), Gaps = 3/61 (4%)
Frame = +1
Query: 193 CGPCKMIGPKLD---EIAAEMXXXXXXXXXXXXXXXXXASEYNINSMPTFVFVKNGKKLD 363
CG CK +GP D E A E +S NI ++PT +NG+ ++
Sbjct: 54 CGACKRLGPMWDNMVEKAKEQVEGSNFHFGEVDCSKELSSCANIRAVPTLYLYQNGEIVE 113
Query: 364 E 366
E
Sbjct: 114 E 114
>SPAPB21F2.02 |||Dopey family protein|Schizosaccharomyces pombe|chr
1|||Manual
Length = 1687
Score = 28.7 bits (61), Expect = 0.80
Identities = 11/30 (36%), Positives = 17/30 (56%)
Frame = -3
Query: 538 KFITDVKNIFYSFIKNVYMFFFFNSILVSI 449
KFI D +N F+ I Y F F ++L+ +
Sbjct: 436 KFILDSQNFFFESINTEYSFIIFTNLLMHL 465
>SPAC1786.03 |cut11|SPAC24C9.01|integral membrane
nucleoporin|Schizosaccharomyces pombe|chr 1|||Manual
Length = 601
Score = 27.9 bits (59), Expect = 1.4
Identities = 10/27 (37%), Positives = 17/27 (62%)
Frame = -1
Query: 543 SSNSLQTLKTFFIHLLKTYTCFFFLIP 463
SS +L +F+ L++ + CFFF+ P
Sbjct: 50 SSGPFISLSFWFLSLVRGFVCFFFMFP 76
>SPAC27D7.03c |mei2||RNA-binding protein involved in meiosis
Mei2|Schizosaccharomyces pombe|chr 1|||Manual
Length = 750
Score = 27.5 bits (58), Expect = 1.8
Identities = 12/41 (29%), Positives = 22/41 (53%)
Frame = -3
Query: 562 QTQKINIFKFITDVKNIFYSFIKNVYMFFFFNSILVSIGGC 440
++ + N ++TD +NIF +F+ N + F + L I C
Sbjct: 71 KSSESNSIDYLTDTQNIFPNFVNNENNYQFSTAPLNPIDAC 111
>SPAC1A6.10 ||SPAC30D11.15c|Moeb/ThiF domain|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 485
Score = 27.1 bits (57), Expect = 2.4
Identities = 11/35 (31%), Positives = 17/35 (48%)
Frame = +3
Query: 24 WLTYIVIVIACSXRFGNSCICIKTQDVHSHQRFRR 128
W+TY IA S +C+ + T + H+ RR
Sbjct: 26 WITYKSFWIAVSSSVTTACVILGTLEFRKHRSIRR 60
>SPAC24B11.12c |||P-type ATPase |Schizosaccharomyces pombe|chr
1|||Manual
Length = 1402
Score = 26.2 bits (55), Expect = 4.2
Identities = 17/45 (37%), Positives = 22/45 (48%)
Frame = -3
Query: 583 FFAFQRLQTQKINIFKFITDVKNIFYSFIKNVYMFFFFNSILVSI 449
+F +++T K FI KNIF F +FF F IL SI
Sbjct: 84 WFPRNKIRTAKYTPIDFIP--KNIFLQFQNVANLFFLFLVILQSI 126
>SPMIT.02 |||mitochondrial DNA binding
endonuclease|Schizosaccharomyces pombe|chr
mitochondrial|||Manual
Length = 384
Score = 25.8 bits (54), Expect = 5.6
Identities = 14/61 (22%), Positives = 28/61 (45%)
Frame = -3
Query: 601 ITTEPIFFAFQRLQTQKINIFKFITDVKNIFYSFIKNVYMFFFFNSILVSIGGCVQL*SL 422
+ T+ I+F + T + + + +++ F S ++N+ FF S G C+ L
Sbjct: 22 VITQLIYFLTSKKITN-LGKIRLVKSIRDSFLSQLENILCFFLVYRTTYSFGVCLMKRFL 80
Query: 421 F 419
F
Sbjct: 81 F 81
>SPAC167.07c ||SPAC57A7.03c|ubiquitin-protein ligase E3
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1029
Score = 25.4 bits (53), Expect = 7.4
Identities = 9/22 (40%), Positives = 16/22 (72%)
Frame = -1
Query: 552 KLISSNSLQTLKTFFIHLLKTY 487
KL+SSN+LQ + F+ ++K +
Sbjct: 412 KLVSSNTLQAMSHFYATMIKLF 433
>SPBC947.10 |||ubiquitin-protein ligase E3 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 676
Score = 25.4 bits (53), Expect = 7.4
Identities = 16/59 (27%), Positives = 30/59 (50%)
Frame = -1
Query: 411 FKDSCFEFVDVSAREFVQFLAILNEDERRHRVNVVLAGDVLALINVHLHNDDGI*HFGG 235
F + +E+VD ++ + + F+ L + ++ GD + INV L + D +FGG
Sbjct: 114 FSANLYEYVDGNS-DGISFVLNLENNNDTSVYHMTFHGDRVKPINVFLGSTDVTPNFGG 171
>SPBP4H10.15 |||aconitate hydratase|Schizosaccharomyces pombe|chr
2|||Manual
Length = 905
Score = 25.0 bits (52), Expect = 9.8
Identities = 14/41 (34%), Positives = 22/41 (53%)
Frame = +1
Query: 118 DSDDLKTRLAEAGDKLVVIDFMATWCGPCKMIGPKLDEIAA 240
+ D + RL EAG + +A CGPC + + D+IA+
Sbjct: 431 ERDGITERLEEAGATV-----LANACGPCIGMWKRTDDIAS 466
>SPAC29E6.07 ||SPAC30.11|sequence orphan|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 116
Score = 25.0 bits (52), Expect = 9.8
Identities = 12/30 (40%), Positives = 16/30 (53%)
Frame = -3
Query: 622 FYLLNCLITTEPIFFAFQRLQTQKINIFKF 533
FYLL+ I T P+F T I+I K+
Sbjct: 46 FYLLHVRINTSPLFIKTTTRPTALIHITKY 75
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,531,021
Number of Sequences: 5004
Number of extensions: 48260
Number of successful extensions: 171
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 160
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 166
length of database: 2,362,478
effective HSP length: 70
effective length of database: 2,012,198
effective search space used: 303841898
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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