Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fe100P05_F_J09
         (652 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

02_05_1041 - 33713561-33714564,33714844-33714904,33715640-337159...    30   1.8  
01_03_0263 + 14397549-14412911,14413023-14413787,14413950-14414132     29   2.4  
05_03_0142 - 8866316-8866608,8867652-8867886,8868801-8869076,886...    29   3.2  
07_03_1792 + 29569623-29569737,29569848-29569981,29570117-295702...    28   5.6  
02_02_0247 + 8261735-8261873,8261932-8261975,8262100-8262224,826...    28   5.6  
04_04_1211 + 31783076-31783680,31784162-31784427,31784546-31785378     28   7.4  
02_04_0179 + 20682852-20684510,20684593-20684661,20684741-206848...    28   7.4  
04_04_0379 + 24828928-24829258,24829945-24829996,24830366-24830546     27   9.8  
03_05_0041 - 20169308-20169317,20169485-20170491                       27   9.8  

>02_05_1041 -
           33713561-33714564,33714844-33714904,33715640-33715951,
           33716780-33716917
          Length = 504

 Score = 29.9 bits (64), Expect = 1.8
 Identities = 17/57 (29%), Positives = 24/57 (42%), Gaps = 2/57 (3%)
 Frame = +1

Query: 409 NEKKEEETQDAMPDSTTSTEKNNANP--FHCGDDVLVANKDGRYYLGTIIELSTSND 573
           N++   E  +   D     E     P  F  G      +KDGR+Y G +I L  S+D
Sbjct: 80  NQEPTSEAPEVAVDPPDDVEPEPLEPQEFSVGSKCRFRHKDGRWYNGCVIGLEGSSD 136


>01_03_0263 + 14397549-14412911,14413023-14413787,14413950-14414132
          Length = 5436

 Score = 29.5 bits (63), Expect = 2.4
 Identities = 16/59 (27%), Positives = 30/59 (50%)
 Frame = +1

Query: 331 VSKQLSLIDELLRDLDKTITPCASKKNEKKEEETQDAMPDSTTSTEKNNANPFHCGDDV 507
           +  + + + E   +L+K  T C    N+K+E+E  D +  +T   EK++ N F   D +
Sbjct: 508 IEDKTNFMPEKFSELEKVYTGCEKLNNKKEEQEENDKI--NTLKDEKDH-NTFEHTDSI 563


>05_03_0142 -
           8866316-8866608,8867652-8867886,8868801-8869076,
           8869166-8869292,8869869-8870116,8870189-8871104,
           8871980-8872086,8872562-8872930
          Length = 856

 Score = 29.1 bits (62), Expect = 3.2
 Identities = 13/32 (40%), Positives = 16/32 (50%)
 Frame = +1

Query: 430 TQDAMPDSTTSTEKNNANPFHCGDDVLVANKD 525
           TQD M  S T+    N N +HCG      N+D
Sbjct: 738 TQDQMKSSMTAIHNENKNLYHCGIVYAHRNED 769


>07_03_1792 +
           29569623-29569737,29569848-29569981,29570117-29570284,
           29572817-29573003,29573098-29573422,29573591-29574368,
           29574897-29575022
          Length = 610

 Score = 28.3 bits (60), Expect = 5.6
 Identities = 10/16 (62%), Positives = 12/16 (75%)
 Frame = +1

Query: 391 PCASKKNEKKEEETQD 438
           PC S KN KK++ET D
Sbjct: 187 PCTSNKNSKKQKETND 202


>02_02_0247 +
           8261735-8261873,8261932-8261975,8262100-8262224,
           8262331-8262391,8262434-8262442
          Length = 125

 Score = 28.3 bits (60), Expect = 5.6
 Identities = 12/36 (33%), Positives = 20/36 (55%)
 Frame = +1

Query: 316 DIKAEVSKQLSLIDELLRDLDKTITPCASKKNEKKE 423
           + KA V K++  I   L+ +D+ +     K+N KKE
Sbjct: 87  EAKANVKKRIEYISAELKRMDRALKDLEEKQNSKKE 122


>04_04_1211 + 31783076-31783680,31784162-31784427,31784546-31785378
          Length = 567

 Score = 27.9 bits (59), Expect = 7.4
 Identities = 15/34 (44%), Positives = 21/34 (61%), Gaps = 5/34 (14%)
 Frame = +1

Query: 373 LDKTIT-----PCASKKNEKKEEETQDAMPDSTT 459
           LDKT+      P AS+  E+KEEE +  +PD +T
Sbjct: 443 LDKTVRVAVTRPRASRSREEKEEEEEVEIPDHST 476


>02_04_0179 +
           20682852-20684510,20684593-20684661,20684741-20684809,
           20686779-20688206
          Length = 1074

 Score = 27.9 bits (59), Expect = 7.4
 Identities = 11/29 (37%), Positives = 17/29 (58%)
 Frame = +1

Query: 400 SKKNEKKEEETQDAMPDSTTSTEKNNANP 486
           +K+ +K   ET+D  P  TT  +K  A+P
Sbjct: 269 AKEEQKPSPETKDKKPPETTGKDKKPADP 297


>04_04_0379 + 24828928-24829258,24829945-24829996,24830366-24830546
          Length = 187

 Score = 27.5 bits (58), Expect = 9.8
 Identities = 18/53 (33%), Positives = 25/53 (47%)
 Frame = +1

Query: 421 EEETQDAMPDSTTSTEKNNANPFHCGDDVLVANKDGRYYLGTIIELSTSNDND 579
           E ET +A P  T S E+NN        D   +  DG  Y+ T  + +T +D D
Sbjct: 132 ESETVEADP-ITHSEEQNNEEEEDSDKDEEDSESDGAEYMDTDDDNNTESDED 183


>03_05_0041 - 20169308-20169317,20169485-20170491
          Length = 338

 Score = 27.5 bits (58), Expect = 9.8
 Identities = 15/32 (46%), Positives = 21/32 (65%)
 Frame = -1

Query: 625 RT*LSIGPRLRPPHTSRCHYSYLTLLLFLNNI 530
           RT L +GP +RPP  SR +   L ++LFL +I
Sbjct: 166 RTGLEVGPIVRPPLVSR-NQMILLVILFLVSI 196


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,955,351
Number of Sequences: 37544
Number of extensions: 229893
Number of successful extensions: 651
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 639
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 649
length of database: 14,793,348
effective HSP length: 79
effective length of database: 11,827,372
effective search space used: 1620349964
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)