Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fe100P05_F_J07
         (639 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z92834-3|CAB07384.1|  328|Caenorhabditis elegans Hypothetical pr...    54   7e-08
Z70782-4|CAA94842.1|  347|Caenorhabditis elegans Hypothetical pr...    38   0.008
U18781-1|AAB03374.1|  384|Caenorhabditis elegans alcohol dehydro...    37   0.011
AC006663-4|AAF39899.1|  384|Caenorhabditis elegans Hypothetical ...    37   0.011
AC006663-3|AAL32231.1|  386|Caenorhabditis elegans Hypothetical ...    37   0.011
AC025722-1|AAK68507.1|  554|Caenorhabditis elegans Hypothetical ...    36   0.032
Z70782-3|CAA94841.1|  347|Caenorhabditis elegans Hypothetical pr...    35   0.056
Z82081-5|CAB04958.1|  344|Caenorhabditis elegans Hypothetical pr...    34   0.075
Z81570-2|CAB04604.1|  349|Caenorhabditis elegans Hypothetical pr...    32   0.30 
U10401-9|AAA19054.4|  771|Caenorhabditis elegans Hypothetical pr...    30   1.2  
Z81479-1|CAB03944.1| 1043|Caenorhabditis elegans Hypothetical pr...    29   3.7  
U97011-2|AAB52325.2|  689|Caenorhabditis elegans Hypothetical pr...    28   4.9  
Z92804-1|CAB07252.1|  338|Caenorhabditis elegans Hypothetical pr...    28   6.5  
U88172-11|AAB42257.1|  390|Caenorhabditis elegans Hypothetical p...    28   6.5  
U88172-10|AAM97988.1|  437|Caenorhabditis elegans Hypothetical p...    28   6.5  
AF125951-1|AAD14690.3|  326|Caenorhabditis elegans Hypothetical ...    27   8.6  
AC024844-8|AAK29951.1|  421|Caenorhabditis elegans Hypothetical ...    27   8.6  

>Z92834-3|CAB07384.1|  328|Caenorhabditis elegans Hypothetical
           protein F39B2.3 protein.
          Length = 328

 Score = 54.4 bits (125), Expect = 7e-08
 Identities = 31/80 (38%), Positives = 46/80 (57%)
 Frame = +2

Query: 398 PKTPFILGFECAGEIEQVGENVTNFKVGDQVVALPEYRAWAELVSVPAQYVYALPEGMSX 577
           P  P++ G + AG +E VGE+V N KVGD+V    E  + AE V+V     + LPEG+S 
Sbjct: 64  PNLPYVPGKDGAGFVELVGESVKNVKVGDRVWYGSEADSTAEYVAV--NRPFELPEGVSF 121

Query: 578 LDAVAITTNYVVAYLLLFEM 637
            +  ++   Y+ AY  LF +
Sbjct: 122 EEGASLGVPYLTAYRALFHL 141



 Score = 34.7 bits (76), Expect = 0.056
 Identities = 16/51 (31%), Positives = 29/51 (56%)
 Frame = +1

Query: 235 MRAVVLTGFGGLKTVKILKKPEPTVGEGEVLIRVKACGLNFQDLIVRQGRH 387
           MRA V+  FG    ++ ++   P + + +VL+R  A G+N  D  +R G++
Sbjct: 10  MRAAVVRRFGAPDVIEAVESDMPRLEKNQVLVRNYAAGVNPVDTYIRAGQY 60


>Z70782-4|CAA94842.1|  347|Caenorhabditis elegans Hypothetical
           protein R04B5.6 protein.
          Length = 347

 Score = 37.5 bits (83), Expect = 0.008
 Identities = 14/34 (41%), Positives = 21/34 (61%)
 Frame = +2

Query: 401 KTPFILGFECAGEIEQVGENVTNFKVGDQVVALP 502
           K P +LG E +G + ++G  V  FKVGD++   P
Sbjct: 59  KEPMVLGHESSGVVSEIGSEVKGFKVGDRIAMEP 92


>U18781-1|AAB03374.1|  384|Caenorhabditis elegans alcohol
           dehydrogenase protein.
          Length = 384

 Score = 37.1 bits (82), Expect = 0.011
 Identities = 17/31 (54%), Positives = 20/31 (64%)
 Frame = +2

Query: 407 PFILGFECAGEIEQVGENVTNFKVGDQVVAL 499
           P +LG E +G +E VGE VT F  GD VV L
Sbjct: 65  PVVLGHEGSGIVESVGEGVTGFAPGDHVVPL 95


>AC006663-4|AAF39899.1|  384|Caenorhabditis elegans Hypothetical
           protein H24K24.3a protein.
          Length = 384

 Score = 37.1 bits (82), Expect = 0.011
 Identities = 17/31 (54%), Positives = 20/31 (64%)
 Frame = +2

Query: 407 PFILGFECAGEIEQVGENVTNFKVGDQVVAL 499
           P +LG E +G +E VGE VT F  GD VV L
Sbjct: 65  PVVLGHEGSGIVESVGEGVTGFAPGDHVVPL 95


>AC006663-3|AAL32231.1|  386|Caenorhabditis elegans Hypothetical
           protein H24K24.3b protein.
          Length = 386

 Score = 37.1 bits (82), Expect = 0.011
 Identities = 17/31 (54%), Positives = 20/31 (64%)
 Frame = +2

Query: 407 PFILGFECAGEIEQVGENVTNFKVGDQVVAL 499
           P +LG E +G +E VGE VT F  GD VV L
Sbjct: 67  PVVLGHEGSGIVESVGEGVTGFAPGDHVVPL 97


>AC025722-1|AAK68507.1|  554|Caenorhabditis elegans Hypothetical
           protein Y50D4C.2 protein.
          Length = 554

 Score = 35.5 bits (78), Expect = 0.032
 Identities = 16/31 (51%), Positives = 20/31 (64%)
 Frame = +2

Query: 407 PFILGFECAGEIEQVGENVTNFKVGDQVVAL 499
           P +LG E +G +E VG+ VT F  GD VV L
Sbjct: 238 PVVLGHEGSGIVESVGKGVTGFAPGDHVVPL 268


>Z70782-3|CAA94841.1|  347|Caenorhabditis elegans Hypothetical
           protein R04B5.5 protein.
          Length = 347

 Score = 34.7 bits (76), Expect = 0.056
 Identities = 14/34 (41%), Positives = 21/34 (61%)
 Frame = +2

Query: 401 KTPFILGFECAGEIEQVGENVTNFKVGDQVVALP 502
           K P I+G E +G + +VG  V + KVGD++   P
Sbjct: 59  KEPMIVGHETSGIVSEVGNEVKHLKVGDRIAMEP 92


>Z82081-5|CAB04958.1|  344|Caenorhabditis elegans Hypothetical
           protein W09H1.5 protein.
          Length = 344

 Score = 34.3 bits (75), Expect = 0.075
 Identities = 23/78 (29%), Positives = 34/78 (43%), Gaps = 1/78 (1%)
 Frame = +2

Query: 398 PKTPFILGFECAGEIEQVGENVTNFKVGDQVVA-LPEYRAWAELVSVPAQYVYALPEGMS 574
           P  P + G E  G++  VG NV++ KVGD V+        W EL       ++ +   +S
Sbjct: 73  PALPAVGGNEGFGKVISVGSNVSSIKVGDHVIPDRSGLGTWRELGLHQENDLFPIDNTLS 132

Query: 575 XLDAVAITTNYVVAYLLL 628
              A     N   AY +L
Sbjct: 133 MEYAATFQVNPPTAYRML 150


>Z81570-2|CAB04604.1|  349|Caenorhabditis elegans Hypothetical
           protein K12G11.3 protein.
          Length = 349

 Score = 32.3 bits (70), Expect = 0.30
 Identities = 12/27 (44%), Positives = 20/27 (74%)
 Frame = +2

Query: 407 PFILGFECAGEIEQVGENVTNFKVGDQ 487
           P + G E AG + Q+G+NVT +++GD+
Sbjct: 64  PLVGGHEGAGSVVQIGKNVTGWQLGDK 90


>U10401-9|AAA19054.4|  771|Caenorhabditis elegans Hypothetical
           protein T20B12.1 protein.
          Length = 771

 Score = 30.3 bits (65), Expect = 1.2
 Identities = 14/34 (41%), Positives = 20/34 (58%)
 Frame = -3

Query: 499 KSHHLIAHLKIGDIFANLLDFTSAFEAQDERSLR 398
           K +  + H+ +GDI  NL  FT A E  D+R+ R
Sbjct: 419 KPNDSMLHVYLGDITRNLEYFTKAIELSDDRNAR 452


>Z81479-1|CAB03944.1| 1043|Caenorhabditis elegans Hypothetical
           protein C34F6.1 protein.
          Length = 1043

 Score = 28.7 bits (61), Expect = 3.7
 Identities = 11/34 (32%), Positives = 21/34 (61%)
 Frame = +3

Query: 111 RRRDSSTGEDPDRKWCY*NTARGNARKIYRGXKG 212
           +RRD+  G++   +W + N A+   R +Y+G +G
Sbjct: 241 QRRDTGEGDELVARWYFDNQAKECRRFLYKGIRG 274


>U97011-2|AAB52325.2|  689|Caenorhabditis elegans Hypothetical
           protein F31F7.2 protein.
          Length = 689

 Score = 28.3 bits (60), Expect = 4.9
 Identities = 11/41 (26%), Positives = 23/41 (56%)
 Frame = +2

Query: 404 TPFILGFECAGEIEQVGENVTNFKVGDQVVALPEYRAWAEL 526
           TP I  F+   EI+ + + ++  K+G   VA+ ++  W+ +
Sbjct: 98  TPQITSFQHRAEIDFLRQVMSTMKMGSSKVAMAQFTPWSRI 138


>Z92804-1|CAB07252.1|  338|Caenorhabditis elegans Hypothetical
           protein K05D4.2 protein.
          Length = 338

 Score = 27.9 bits (59), Expect = 6.5
 Identities = 13/41 (31%), Positives = 18/41 (43%), Gaps = 8/41 (19%)
 Frame = +3

Query: 528 YLYRRSMCTRCPKE--------CLXWMLLPSPRTTWWPICC 626
           + Y R +C  CPK+        C  W+LL     + W  CC
Sbjct: 112 HFYYRYICVACPKKLLRFSLRNCFLWILLVLSNFSIWFYCC 152


>U88172-11|AAB42257.1|  390|Caenorhabditis elegans Hypothetical
           protein ZK354.2a protein.
          Length = 390

 Score = 27.9 bits (59), Expect = 6.5
 Identities = 13/26 (50%), Positives = 18/26 (69%)
 Frame = -2

Query: 326 RTSPSPTVGSGFLSILTVLRPPKPVS 249
           RT+P  T  +GF  +LTV+R PK V+
Sbjct: 262 RTTPETT--AGFFDLLTVIREPKDVA 285


>U88172-10|AAM97988.1|  437|Caenorhabditis elegans Hypothetical
           protein ZK354.2b protein.
          Length = 437

 Score = 27.9 bits (59), Expect = 6.5
 Identities = 13/26 (50%), Positives = 18/26 (69%)
 Frame = -2

Query: 326 RTSPSPTVGSGFLSILTVLRPPKPVS 249
           RT+P  T  +GF  +LTV+R PK V+
Sbjct: 262 RTTPETT--AGFFDLLTVIREPKDVA 285


>AF125951-1|AAD14690.3|  326|Caenorhabditis elegans Hypothetical
           protein D2063.1 protein.
          Length = 326

 Score = 27.5 bits (58), Expect = 8.6
 Identities = 13/43 (30%), Positives = 25/43 (58%)
 Frame = +1

Query: 238 RAVVLTGFGGLKTVKILKKPEPTVGEGEVLIRVKACGLNFQDL 366
           RA++   +GG   +K L  P+P   E E+L++++  G+   D+
Sbjct: 11  RALIFESYGGPLEIKQLPIPQP--NEDELLVKMEYSGICHSDV 51


>AC024844-8|AAK29951.1|  421|Caenorhabditis elegans Hypothetical
           protein Y65B4A.9 protein.
          Length = 421

 Score = 27.5 bits (58), Expect = 8.6
 Identities = 12/26 (46%), Positives = 18/26 (69%)
 Frame = -2

Query: 326 RTSPSPTVGSGFLSILTVLRPPKPVS 249
           RT+P  T  +GF  +LT++R PK V+
Sbjct: 262 RTTPETT--AGFFDLLTIIREPKDVA 285


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,915,199
Number of Sequences: 27780
Number of extensions: 253486
Number of successful extensions: 612
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 592
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 612
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1416829972
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)