Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fe100P05_F_I24
(653 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPCC18B5.01c |bfr1|hba2, SPCPJ732.04c|brefeldin A efflux transpo... 57 3e-09
SPCC737.09c |hmt1|SPCC74.08c|ATP-binding cassette-type vacuolar ... 40 3e-04
SPBC359.05 |abc3||ABC transporter Abc3|Schizosaccharomyces pombe... 36 0.007
SPAPB24D3.09c |pdr1||ABC transporter Pdr1|Schizosaccharomyces po... 34 0.021
SPCC663.03 |pmd1||leptomycin efflux transporter Pmd1|Schizosacch... 33 0.036
SPAC323.04 |||mitochondrial ATPase |Schizosaccharomyces pombe|ch... 32 0.063
SPAC30.04c |abc4||glutathione S-conjugate-exporting ATPase Abc4|... 32 0.083
SPAC1F8.01 |ght3||hexose transporter Ght3 |Schizosaccharomyces p... 30 0.34
SPAC4F10.11 |spn1||septin Spn1|Schizosaccharomyces pombe|chr 1||... 29 0.44
SPAC3C7.08c |elf1||AAA family ATPase ELf1|Schizosaccharomyces po... 29 0.59
SPBC1683.08 |ght4||hexose transporter Ght4 |Schizosaccharomyces ... 29 0.77
SPBC16H5.08c |||ribosome biogenesis ATPase, Arb family |Schizosa... 28 1.0
SPAC3F10.11c |abc2||glutathione S-conjugate-exporting ATPase Abc... 28 1.0
SPBC14F5.06 |||iron-sulfur protein|Schizosaccharomyces pombe|chr... 28 1.0
SPAC1556.01c |rad50|SPAP4C9.01c|DNA repair protein Rad50|Schizos... 28 1.0
SPBC31E1.06 |bms1|SPBC800.01|GTP binding protein Bms1|Schizosacc... 28 1.4
SPAC222.14c |||GTP binding protein Sey1 |Schizosaccharomyces pom... 28 1.4
SPAC9G1.11c |spn4||septin Spn4|Schizosaccharomyces pombe|chr 1||... 27 1.8
SPBC25B2.02c |mam1|SPBC2G5.09c|M-factor transporter Mam1 |Schizo... 27 1.8
SPAC821.06 |spn2||septin Spn2|Schizosaccharomyces pombe|chr 1|||... 27 1.8
SPCC188.12 |spn6|SPCC584.09|septin Spn6|Schizosaccharomyces pomb... 27 2.4
SPAC10F6.02c |prp22||ATP-dependent RNA helicase Prp22|Schizosacc... 27 2.4
SPBC9B6.09c |mdl1||mitochondrial peptide-transporting ATPase|Sch... 26 4.1
SPBC16D10.07c |sir2||Sir2 family histone deacetylase Sir2|Schizo... 26 5.5
SPBC4B4.08 |ght2||hexose transporter Ght2 |Schizosaccharomyces p... 26 5.5
SPCC548.06c |ght8||hexose transporter Ght8 |Schizosaccharomyces ... 26 5.5
SPAC9E9.12c |ybt1|abc1|ABC transporter Ybt1|Schizosaccharomyces ... 26 5.5
SPBC25H2.03 |||vacuolar protein involved in phosphoinositide met... 26 5.5
SPAC222.05c |mss1||COX RNA-associated protein|Schizosaccharomyce... 26 5.5
SPAC23C4.08 |rho3||Rho family GTPase Rho3|Schizosaccharomyces po... 26 5.5
SPBC1652.01 |||conserved fungal protein|Schizosaccharomyces pomb... 26 5.5
SPBC1921.03c |mex67||mRNA export receptor Mex67|Schizosaccharomy... 26 5.5
SPCC1235.14 |ght5||hexose transporter Ght5 |Schizosaccharomyces ... 25 7.2
SPBP4H10.17c |||carboxyl methyl esterase|Schizosaccharomyces pom... 25 7.2
SPAC27E2.09 |mak2|phk1|histidine kinase Mak2 |Schizosaccharomyce... 25 7.2
SPAC13G6.12c |chs1|SPAC24B11.01c|chitin synthase I|Schizosacchar... 25 7.2
SPCC736.14 |dis1||microtubule-associated protein Dis1 |Schizosac... 25 7.2
SPAC4A8.05c |myp2|myo3|myosin II heavy chain |Schizosaccharomyce... 25 7.2
SPCC1281.06c |||acyl-coA desaturase |Schizosaccharomyces pombe|c... 25 9.5
SPAC20G4.01 ||SPAC22F8.13|CCR4-Not complex subunit Caf16|Schizos... 25 9.5
SPCC825.01 |||ribosome biogenesis ATPase, Arb family |Schizosacc... 25 9.5
SPBC428.15 |||GTP binding protein|Schizosaccharomyces pombe|chr ... 25 9.5
>SPCC18B5.01c |bfr1|hba2, SPCPJ732.04c|brefeldin A efflux transporter
Bfr1|Schizosaccharomyces pombe|chr 3|||Manual
Length = 1530
Score = 56.8 bits (131), Expect = 3e-09
Identities = 29/55 (52%), Positives = 36/55 (65%)
Frame = +3
Query: 480 QRKQLLRNVNGAAYPGELLAIMGSSGAGKTTLLNTLTFRTPGGVVATGTRALNGQ 644
+ ++LL V G PG+L A+MG SGAGKTTLLN L R GVV TG +NG+
Sbjct: 896 EHRRLLNGVQGFVVPGKLTALMGESGAGKTTLLNVLAQRVDTGVV-TGDMLVNGR 949
Score = 29.9 bits (64), Expect = 0.34
Identities = 16/52 (30%), Positives = 27/52 (51%)
Frame = +3
Query: 486 KQLLRNVNGAAYPGELLAIMGSSGAGKTTLLNTLTFRTPGGVVATGTRALNG 641
K +L + + A GEL+ ++G G+G +T L ++T T GT +G
Sbjct: 174 KAILSHCHALANAGELVMVLGQPGSGCSTFLRSVTSDTVHYKRVEGTTHYDG 225
>SPCC737.09c |hmt1|SPCC74.08c|ATP-binding cassette-type vacuolar
membrane transporter Hmt1|Schizosaccharomyces pombe|chr
3|||Manual
Length = 830
Score = 39.9 bits (89), Expect = 3e-04
Identities = 15/38 (39%), Positives = 27/38 (71%)
Frame = +3
Query: 474 FQQRKQLLRNVNGAAYPGELLAIMGSSGAGKTTLLNTL 587
+ RK +L ++N A PG+++A++G SG GK+T++ L
Sbjct: 593 YDPRKPVLSDINFVAQPGKVIALVGESGGGKSTIMRIL 630
>SPBC359.05 |abc3||ABC transporter Abc3|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 1465
Score = 35.5 bits (78), Expect = 0.007
Identities = 23/65 (35%), Positives = 30/65 (46%), Gaps = 3/65 (4%)
Frame = +3
Query: 459 SSDRMFQQRKQLLRNVNGAAYPGELLAIMGSSGAGKTTLLNTL---TFRTPGGVVATGTR 629
S + QQ LR +N A GEL I G GAGK++LL ++ G V G+
Sbjct: 585 SKKTLKQQVTPTLRQINFVAKNGELTCIFGKVGAGKSSLLEACMGNMYKNSGSVFQCGSL 644
Query: 630 ALNGQ 644
A Q
Sbjct: 645 AYAAQ 649
Score = 29.9 bits (64), Expect = 0.34
Identities = 14/31 (45%), Positives = 19/31 (61%)
Frame = +3
Query: 495 LRNVNGAAYPGELLAIMGSSGAGKTTLLNTL 587
L N+N P E + I+G +GAGK+TL L
Sbjct: 1243 LNNINIEISPREKIGIVGRTGAGKSTLAMAL 1273
>SPAPB24D3.09c |pdr1||ABC transporter Pdr1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1396
Score = 33.9 bits (74), Expect = 0.021
Identities = 20/53 (37%), Positives = 30/53 (56%)
Frame = +3
Query: 483 RKQLLRNVNGAAYPGELLAIMGSSGAGKTTLLNTLTFRTPGGVVATGTRALNG 641
+KQ+L NV+G L A++G + +GK+ LL L+ R G V G L+G
Sbjct: 773 KKQILTNVSGYLKKNTLTALLGENKSGKSVLLRILSQRGIAGSV-EGEITLSG 824
Score = 29.1 bits (62), Expect = 0.59
Identities = 12/32 (37%), Positives = 19/32 (59%)
Frame = +3
Query: 492 LLRNVNGAAYPGELLAIMGSSGAGKTTLLNTL 587
L++ +G PG L ++G G+G +TLL L
Sbjct: 91 LVKGFDGYLQPGSSLLVLGHEGSGGSTLLKAL 122
>SPCC663.03 |pmd1||leptomycin efflux transporter
Pmd1|Schizosaccharomyces pombe|chr 3|||Manual
Length = 1362
Score = 33.1 bits (72), Expect = 0.036
Identities = 13/33 (39%), Positives = 22/33 (66%)
Frame = +3
Query: 489 QLLRNVNGAAYPGELLAIMGSSGAGKTTLLNTL 587
++LR +N PG+ +A +GSSG GK+T + +
Sbjct: 1135 KVLRGLNLTVKPGQFVAFVGSSGCGKSTTIGLI 1167
>SPAC323.04 |||mitochondrial ATPase |Schizosaccharomyces pombe|chr
1|||Manual
Length = 487
Score = 32.3 bits (70), Expect = 0.063
Identities = 14/31 (45%), Positives = 22/31 (70%)
Frame = +3
Query: 486 KQLLRNVNGAAYPGELLAIMGSSGAGKTTLL 578
+++L ++N GE A+ GS+G+GKTTLL
Sbjct: 277 RKVLSDINWTIREGERWALTGSNGSGKTTLL 307
Score = 25.0 bits (52), Expect = 9.5
Identities = 13/45 (28%), Positives = 24/45 (53%)
Frame = +3
Query: 453 KNSSDRMFQQRKQLLRNVNGAAYPGELLAIMGSSGAGKTTLLNTL 587
K ++ R L +NV+ + AI+G++G+G+TT L +
Sbjct: 6 KFANTTFLDARFPLFKNVSFELARKQNWAIIGNTGSGRTTFLRCI 50
>SPAC30.04c |abc4||glutathione S-conjugate-exporting ATPase
Abc4|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1469
Score = 31.9 bits (69), Expect = 0.083
Identities = 20/54 (37%), Positives = 33/54 (61%), Gaps = 5/54 (9%)
Frame = +3
Query: 492 LLRNVNGAAYPGELLAIMGSSGAGKTTLLNTL---TFRTPGGVVATG--TRALN 638
+L++VN P E +A++G +G+GK+TL TL T R G + G T+++N
Sbjct: 1228 ILKDVNLHINPSEKVAVVGRTGSGKSTLGLTLLRFTHRISGEIYINGRETQSVN 1281
>SPAC1F8.01 |ght3||hexose transporter Ght3 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 555
Score = 29.9 bits (64), Expect = 0.34
Identities = 12/44 (27%), Positives = 22/44 (50%)
Frame = -1
Query: 371 FNTSDGSVVAILRYGHSDFTDT*SWRVIWRLTILWGVVVCYALI 240
F+T V A + G T SWR + + +LWG+++ ++
Sbjct: 154 FSTGAALVAACINMGTHKLRKTASWRTSFGINMLWGILLMVGVL 197
>SPAC4F10.11 |spn1||septin Spn1|Schizosaccharomyces pombe|chr
1|||Manual
Length = 469
Score = 29.5 bits (63), Expect = 0.44
Identities = 16/39 (41%), Positives = 23/39 (58%), Gaps = 3/39 (7%)
Frame = +3
Query: 540 IMGSSGAGKTTLLNTLTFR---TPGGVVATGTRALNGQP 647
++G SG+GK+TL+NTL R P TG +N +P
Sbjct: 100 VLGESGSGKSTLVNTLLNRDVYPPTQKSLTGDFGVNPEP 138
>SPAC3C7.08c |elf1||AAA family ATPase ELf1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1057
Score = 29.1 bits (62), Expect = 0.59
Identities = 16/44 (36%), Positives = 24/44 (54%)
Frame = +3
Query: 456 NSSDRMFQQRKQLLRNVNGAAYPGELLAIMGSSGAGKTTLLNTL 587
N+S +K+ L NV +AI+G +GAGK+TL+ L
Sbjct: 696 NASYTYPNAKKKSLDNVTVGLSLSSRVAILGPNGAGKSTLIKVL 739
Score = 27.5 bits (58), Expect = 1.8
Identities = 12/32 (37%), Positives = 18/32 (56%)
Frame = +3
Query: 492 LLRNVNGAAYPGELLAIMGSSGAGKTTLLNTL 587
LL + N Y G ++G +G GK+TLL +
Sbjct: 459 LLSHTNLHLYRGHRYGVVGHNGCGKSTLLRAI 490
>SPBC1683.08 |ght4||hexose transporter Ght4 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 557
Score = 28.7 bits (61), Expect = 0.77
Identities = 12/44 (27%), Positives = 20/44 (45%)
Frame = -1
Query: 371 FNTSDGSVVAILRYGHSDFTDT*SWRVIWRLTILWGVVVCYALI 240
F T + A + G T SWR + + ILWG+ + ++
Sbjct: 154 FQTCGTLIAACINMGTHKLRKTASWRTSFGINILWGIFLMVGVL 197
>SPBC16H5.08c |||ribosome biogenesis ATPase, Arb family
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 618
Score = 28.3 bits (60), Expect = 1.0
Identities = 11/19 (57%), Positives = 16/19 (84%)
Frame = +3
Query: 534 LAIMGSSGAGKTTLLNTLT 590
+AI+G +G GK+TLLN +T
Sbjct: 419 VAIVGKNGTGKSTLLNLIT 437
>SPAC3F10.11c |abc2||glutathione S-conjugate-exporting ATPase
Abc2|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1463
Score = 28.3 bits (60), Expect = 1.0
Identities = 13/28 (46%), Positives = 19/28 (67%)
Frame = +3
Query: 495 LRNVNGAAYPGELLAIMGSSGAGKTTLL 578
LR+++ A GEL I+G G GK++LL
Sbjct: 599 LRDIDFVARRGELCCIVGKVGMGKSSLL 626
>SPBC14F5.06 |||iron-sulfur protein|Schizosaccharomyces pombe|chr
2|||Manual
Length = 593
Score = 28.3 bits (60), Expect = 1.0
Identities = 10/23 (43%), Positives = 18/23 (78%)
Frame = +3
Query: 522 PGELLAIMGSSGAGKTTLLNTLT 590
PG++L ++G++G GK+T L L+
Sbjct: 102 PGQVLGLVGTNGIGKSTALKILS 124
Score = 26.6 bits (56), Expect = 3.1
Identities = 12/39 (30%), Positives = 20/39 (51%)
Frame = +3
Query: 456 NSSDRMFQQRKQLLRNVNGAAYPGELLAIMGSSGAGKTT 572
N D + +Q L +G E++ ++G +G GKTT
Sbjct: 352 NYPDHVIEQGDFKLTIKSGGFSDAEIIVLLGENGTGKTT 390
>SPAC1556.01c |rad50|SPAP4C9.01c|DNA repair protein
Rad50|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1290
Score = 28.3 bits (60), Expect = 1.0
Identities = 11/25 (44%), Positives = 17/25 (68%)
Frame = +3
Query: 531 LLAIMGSSGAGKTTLLNTLTFRTPG 605
L I+G +G+GKTT++ L + T G
Sbjct: 29 LTLIVGQNGSGKTTIIECLKYATTG 53
>SPBC31E1.06 |bms1|SPBC800.01|GTP binding protein
Bms1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1121
Score = 27.9 bits (59), Expect = 1.4
Identities = 12/27 (44%), Positives = 18/27 (66%)
Frame = +3
Query: 516 AYPGELLAIMGSSGAGKTTLLNTLTFR 596
A P ++A+MG G GK+TL+ +L R
Sbjct: 71 APPPVIVAVMGPPGTGKSTLIKSLVRR 97
>SPAC222.14c |||GTP binding protein Sey1 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 762
Score = 27.9 bits (59), Expect = 1.4
Identities = 15/39 (38%), Positives = 22/39 (56%)
Frame = +3
Query: 513 AAYPGELLAIMGSSGAGKTTLLNTLTFRTPGGVVATGTR 629
A + ++A++GS GK+TLLN L F T V+ R
Sbjct: 35 AGFNYHVVAVLGSQSTGKSTLLNNL-FGTSFSVMDASKR 72
>SPAC9G1.11c |spn4||septin Spn4|Schizosaccharomyces pombe|chr
1|||Manual
Length = 380
Score = 27.5 bits (58), Expect = 1.8
Identities = 16/36 (44%), Positives = 21/36 (58%)
Frame = +3
Query: 480 QRKQLLRNVNGAAYPGELLAIMGSSGAGKTTLLNTL 587
QR +++ NG A+ L + G SG GKTT NTL
Sbjct: 17 QRHKIVSR-NGVAFT---LMLCGESGLGKTTFCNTL 48
>SPBC25B2.02c |mam1|SPBC2G5.09c|M-factor transporter Mam1
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1336
Score = 27.5 bits (58), Expect = 1.8
Identities = 11/21 (52%), Positives = 17/21 (80%)
Frame = +3
Query: 525 GELLAIMGSSGAGKTTLLNTL 587
GEL+ I+G SG+GK+T ++ L
Sbjct: 462 GELVHIIGPSGSGKSTFISLL 482
>SPAC821.06 |spn2||septin Spn2|Schizosaccharomyces pombe|chr
1|||Manual
Length = 331
Score = 27.5 bits (58), Expect = 1.8
Identities = 10/16 (62%), Positives = 15/16 (93%)
Frame = +3
Query: 540 IMGSSGAGKTTLLNTL 587
++G SG+GK+TL+NTL
Sbjct: 37 VVGPSGSGKSTLINTL 52
>SPCC188.12 |spn6|SPCC584.09|septin Spn6|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 380
Score = 27.1 bits (57), Expect = 2.4
Identities = 11/21 (52%), Positives = 14/21 (66%)
Frame = +3
Query: 525 GELLAIMGSSGAGKTTLLNTL 587
G + + G+SG GKTT NTL
Sbjct: 30 GLTIMLCGASGTGKTTFFNTL 50
>SPAC10F6.02c |prp22||ATP-dependent RNA helicase
Prp22|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1168
Score = 27.1 bits (57), Expect = 2.4
Identities = 13/34 (38%), Positives = 22/34 (64%)
Frame = +3
Query: 471 MFQQRKQLLRNVNGAAYPGELLAIMGSSGAGKTT 572
+F+ RKQ L V+ ++L ++G +G+GKTT
Sbjct: 512 VFKLRKQFLEAVS----KNQILVLLGETGSGKTT 541
>SPBC9B6.09c |mdl1||mitochondrial peptide-transporting
ATPase|Schizosaccharomyces pombe|chr 2|||Manual
Length = 726
Score = 26.2 bits (55), Expect = 4.1
Identities = 16/44 (36%), Positives = 25/44 (56%), Gaps = 3/44 (6%)
Frame = +3
Query: 501 NVNGAAYPGELLAIMGSSGAGKTTLLN-TLTFRTP--GGVVATG 623
N++ +PG +AI+ SG GK+T+ L F P G ++A G
Sbjct: 502 NLSFDIHPGTNVAIVAPSGGGKSTISQLLLRFYAPSSGKILADG 545
>SPBC16D10.07c |sir2||Sir2 family histone deacetylase
Sir2|Schizosaccharomyces pombe|chr 2|||Manual
Length = 475
Score = 25.8 bits (54), Expect = 5.5
Identities = 13/32 (40%), Positives = 15/32 (46%)
Frame = +1
Query: 238 IISA*HTTTPHRMVKRQMTRHDQVSVKSLWPY 333
+IS TTP + R RH Q V L PY
Sbjct: 384 LISVIPPTTPQIYISRTPVRHTQFDVNFLSPY 415
>SPBC4B4.08 |ght2||hexose transporter Ght2 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 531
Score = 25.8 bits (54), Expect = 5.5
Identities = 11/44 (25%), Positives = 19/44 (43%)
Frame = -1
Query: 371 FNTSDGSVVAILRYGHSDFTDT*SWRVIWRLTILWGVVVCYALI 240
F T + A + G T WRV + +LWG++ ++
Sbjct: 158 FVTGGIFIAACINMGTHKLHKTAQWRVSIGINLLWGIITMIGIL 201
>SPCC548.06c |ght8||hexose transporter Ght8 |Schizosaccharomyces
pombe|chr 3|||Manual
Length = 547
Score = 25.8 bits (54), Expect = 5.5
Identities = 9/32 (28%), Positives = 16/32 (50%)
Frame = -1
Query: 350 VVAILRYGHSDFTDT*SWRVIWRLTILWGVVV 255
+ A + G T WRV + +LWG+++
Sbjct: 161 IAACINMGTHKLHKTAQWRVSMGINLLWGIIM 192
>SPAC9E9.12c |ybt1|abc1|ABC transporter Ybt1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1427
Score = 25.8 bits (54), Expect = 5.5
Identities = 11/31 (35%), Positives = 19/31 (61%)
Frame = +3
Query: 495 LRNVNGAAYPGELLAIMGSSGAGKTTLLNTL 587
L+N+N + ++GS+G+GK+TL L
Sbjct: 597 LKNLNFTIPRNQFTLVVGSTGSGKSTLAMAL 627
>SPBC25H2.03 |||vacuolar protein involved in phosphoinositide
metabolism|Schizosaccharomyces pombe|chr 2|||Manual
Length = 811
Score = 25.8 bits (54), Expect = 5.5
Identities = 16/48 (33%), Positives = 26/48 (54%)
Frame = +2
Query: 335 SKSQLRSHRRY*KSYLHVGRCQRFRHRVQIERKKVLELLEKFFGSHVP 478
S ++L+ Y +S L G H +QI+ K++LE++ GS VP
Sbjct: 307 SDAELKEISDYVESSLRDGSFILEAH-IQIDYKRILEIIIDHLGSSVP 353
>SPAC222.05c |mss1||COX RNA-associated protein|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 496
Score = 25.8 bits (54), Expect = 5.5
Identities = 11/21 (52%), Positives = 16/21 (76%)
Frame = +3
Query: 534 LAIMGSSGAGKTTLLNTLTFR 596
+AI+G S AGK++L+N L R
Sbjct: 242 VAILGPSNAGKSSLINLLANR 262
>SPAC23C4.08 |rho3||Rho family GTPase Rho3|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 205
Score = 25.8 bits (54), Expect = 5.5
Identities = 10/19 (52%), Positives = 13/19 (68%)
Frame = +3
Query: 534 LAIMGSSGAGKTTLLNTLT 590
+ I+G AGKT+LLN T
Sbjct: 16 IVILGDGAAGKTSLLNVFT 34
>SPBC1652.01 |||conserved fungal protein|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 386
Score = 25.8 bits (54), Expect = 5.5
Identities = 10/23 (43%), Positives = 15/23 (65%)
Frame = +3
Query: 213 EPLISTSVDNQRVTYNNSPQDGQ 281
EPL + S+ N + ++ SP DGQ
Sbjct: 199 EPLDTPSLSNSQERFSKSPSDGQ 221
>SPBC1921.03c |mex67||mRNA export receptor Mex67|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 596
Score = 25.8 bits (54), Expect = 5.5
Identities = 12/26 (46%), Positives = 15/26 (57%)
Frame = +3
Query: 495 LRNVNGAAYPGELLAIMGSSGAGKTT 572
L +NGAA+ G+ LAI GA T
Sbjct: 89 LNGLNGAAFAGDHLAIRRVDGASNVT 114
>SPCC1235.14 |ght5||hexose transporter Ght5 |Schizosaccharomyces
pombe|chr 3|||Manual
Length = 546
Score = 25.4 bits (53), Expect = 7.2
Identities = 9/31 (29%), Positives = 15/31 (48%)
Frame = -1
Query: 350 VVAILRYGHSDFTDT*SWRVIWRLTILWGVV 258
+ A + G T WRV + +LWG++
Sbjct: 161 IAACINMGTHKLHKTAQWRVSMGINLLWGII 191
>SPBP4H10.17c |||carboxyl methyl esterase|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 341
Score = 25.4 bits (53), Expect = 7.2
Identities = 21/76 (27%), Positives = 34/76 (44%), Gaps = 9/76 (11%)
Frame = +3
Query: 453 KNSSDRMFQQRKQLLRNVNGAA----YPGELLAIMGSSGAGKTTLLNTLTFRTPGGVV-- 614
+N S++ + ++ +L N + Y E L I G SGA T+ LT P G +
Sbjct: 14 ENESEQSSETKELMLNNEESLSDWRNYFDEKLTIPGESGALNGTINGYLTLPQPDGCLLV 73
Query: 615 ---ATGTRALNGQPAT 653
G+ A++ P T
Sbjct: 74 LQHGAGSSAMSFAPVT 89
>SPAC27E2.09 |mak2|phk1|histidine kinase Mak2 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 2310
Score = 25.4 bits (53), Expect = 7.2
Identities = 12/41 (29%), Positives = 23/41 (56%)
Frame = +3
Query: 465 DRMFQQRKQLLRNVNGAAYPGELLAIMGSSGAGKTTLLNTL 587
D++ +Q R V+ A +++ + G G+GK+ LLN +
Sbjct: 359 DKLPKQHLFKYRPVDNEATYCQVVTVTGEKGSGKSNLLNAV 399
>SPAC13G6.12c |chs1|SPAC24B11.01c|chitin synthase
I|Schizosaccharomyces pombe|chr 1|||Manual
Length = 859
Score = 25.4 bits (53), Expect = 7.2
Identities = 9/14 (64%), Positives = 12/14 (85%)
Frame = -3
Query: 486 FFAGTCDPKNFSKS 445
+ A TCDP++FSKS
Sbjct: 160 YSAATCDPQDFSKS 173
>SPCC736.14 |dis1||microtubule-associated protein Dis1
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 882
Score = 25.4 bits (53), Expect = 7.2
Identities = 17/58 (29%), Positives = 26/58 (44%)
Frame = +1
Query: 259 TTPHRMVKRQMTRHDQVSVKSLWPYLKIATTEPSEVLKKLLTRGPMSTLSPQSPDREE 432
+TP+R V + S + P I + P +VL KL + SP+ DR+E
Sbjct: 278 STPNRKVSQPSDFSASPSRSIVSPAKNIVGSTPVDVLSKLTPEFHTALSSPKWKDRKE 335
>SPAC4A8.05c |myp2|myo3|myosin II heavy chain |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 2104
Score = 25.4 bits (53), Expect = 7.2
Identities = 13/49 (26%), Positives = 23/49 (46%)
Frame = +1
Query: 343 ATTEPSEVLKKLLTRGPMSTLSPQSPDREEEGSGAFGKILRIACSSKES 489
+T++ ++ KK+L P+ + S FGK +RI S+ S
Sbjct: 206 STSDSQQLEKKILETNPVLEAFGNAQTVRNNNSSRFGKFIRIEFSNNGS 254
>SPCC1281.06c |||acyl-coA desaturase |Schizosaccharomyces pombe|chr
3|||Manual
Length = 479
Score = 25.0 bits (52), Expect = 9.5
Identities = 12/28 (42%), Positives = 17/28 (60%), Gaps = 1/28 (3%)
Frame = -3
Query: 315 HRHLI-VASHLAFDHPVGSCCMLRADYQ 235
HRH + +AS +AF P C +L DY+
Sbjct: 202 HRHFLPIASFMAFIFPSLFCGLLWGDYR 229
>SPAC20G4.01 ||SPAC22F8.13|CCR4-Not complex subunit
Caf16|Schizosaccharomyces pombe|chr 1|||Manual
Length = 280
Score = 25.0 bits (52), Expect = 9.5
Identities = 10/22 (45%), Positives = 16/22 (72%)
Frame = +3
Query: 525 GELLAIMGSSGAGKTTLLNTLT 590
G ++G++GAGK+TLL L+
Sbjct: 30 GSRTLLVGANGAGKSTLLKLLS 51
>SPCC825.01 |||ribosome biogenesis ATPase, Arb family
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 822
Score = 25.0 bits (52), Expect = 9.5
Identities = 9/18 (50%), Positives = 15/18 (83%)
Frame = +3
Query: 534 LAIMGSSGAGKTTLLNTL 587
+A++G +GAGKTTL+ +
Sbjct: 623 VALVGPNGAGKTTLIKLI 640
>SPBC428.15 |||GTP binding protein|Schizosaccharomyces pombe|chr
2|||Manual
Length = 409
Score = 25.0 bits (52), Expect = 9.5
Identities = 10/23 (43%), Positives = 15/23 (65%)
Frame = +3
Query: 531 LLAIMGSSGAGKTTLLNTLTFRT 599
L+ +G +GK+T+LN LT T
Sbjct: 6 LIGFVGKPSSGKSTMLNALTDAT 28
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,810,914
Number of Sequences: 5004
Number of extensions: 58779
Number of successful extensions: 279
Number of sequences better than 10.0: 42
Number of HSP's better than 10.0 without gapping: 261
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 279
length of database: 2,362,478
effective HSP length: 70
effective length of database: 2,012,198
effective search space used: 295793106
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -