Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fe100P05_F_I23
         (419 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

11_01_0543 + 4295522-4295863                                           28   2.7  
08_01_0233 + 1876940-1877509,1907940-1908195,1908290-1908589,190...    27   8.1  
06_03_0867 + 25534760-25539620,25540662-25540857,25540957-255411...    27   8.1  
03_03_0044 - 14021874-14022050,14022235-14022390,14023024-140232...    27   8.1  

>11_01_0543 + 4295522-4295863
          Length = 113

 Score = 28.3 bits (60), Expect = 2.7
 Identities = 14/28 (50%), Positives = 15/28 (53%), Gaps = 2/28 (7%)
 Frame = -3

Query: 276 FLGFR--FQCEVKDDCSHYCICGSGRKS 199
           +LGF     CEV DD   YC CG  R S
Sbjct: 77  YLGFSPGAGCEVMDDGHIYCCCGPSRTS 104


>08_01_0233 +
           1876940-1877509,1907940-1908195,1908290-1908589,
           1908777-1908939,1908958-1908994,1910122-1910742
          Length = 648

 Score = 26.6 bits (56), Expect = 8.1
 Identities = 14/32 (43%), Positives = 17/32 (53%)
 Frame = +1

Query: 49  FQIRMAGDSSVDESQLKGLAKYFNSQTNRGRL 144
           F ++M GD  VD+   KGL  Y N     GRL
Sbjct: 465 FNLKMKGDDGVDKDFSKGLLPY-NVVCRTGRL 495


>06_03_0867 + 25534760-25539620,25540662-25540857,25540957-25541104,
            25541673-25541751,25542151-25542238,25542330-25542600,
            25542676-25542718,25542801-25542904,25543374-25543790
          Length = 2068

 Score = 26.6 bits (56), Expect = 8.1
 Identities = 15/52 (28%), Positives = 24/52 (46%), Gaps = 5/52 (9%)
 Frame = -3

Query: 357  CSHDFNYVLYNLTIPYRNMLINF---ACNSFLGFRFQCEVKDDC--SHYCIC 217
            CS+    +  N+  PYR++ +N     C  FL  +  C   D+C   H  +C
Sbjct: 1890 CSYFLRGLCTNIACPYRHVKVNLNAPVCEDFL--KGYCAYGDECHKKHSYVC 1939


>03_03_0044 -
           14021874-14022050,14022235-14022390,14023024-14023203,
           14023816-14024074,14024178-14024416,14025180-14025260,
           14025320-14025328
          Length = 366

 Score = 26.6 bits (56), Expect = 8.1
 Identities = 14/44 (31%), Positives = 25/44 (56%), Gaps = 2/44 (4%)
 Frame = +2

Query: 56  SGWPETLLSMNPSSKA*QNTSTVRQTEED*M*VLNII--LFEID 181
           SGW ETLL+ +P+  +     ++R+  ED   +L  +  L+ +D
Sbjct: 131 SGWFETLLNSHPNVSSNGEIFSIRERREDISSILRTLDKLYNLD 174


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 8,600,824
Number of Sequences: 37544
Number of extensions: 142801
Number of successful extensions: 294
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 291
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 294
length of database: 14,793,348
effective HSP length: 75
effective length of database: 11,977,548
effective search space used: 766563072
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)