Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fe100P05_F_I23
         (419 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Y14277-1|CAA74654.1| 1116|Drosophila melanogaster nuclear protei...    30   1.1  
AY061410-1|AAL28958.1| 1127|Drosophila melanogaster LD34181p pro...    30   1.1  
AE014134-1198|AAF52463.2| 1127|Drosophila melanogaster CG3423-PA...    30   1.1  
AY084195-1|AAL89933.1|  152|Drosophila melanogaster RH07980p pro...    28   5.8  
AE014296-364|AAF47574.1|  152|Drosophila melanogaster CG1935-PA ...    28   5.8  
AB016494-1|BAA34304.1|  152|Drosophila melanogaster dJTB-like pr...    28   5.8  

>Y14277-1|CAA74654.1| 1116|Drosophila melanogaster nuclear protein
           SA protein.
          Length = 1116

 Score = 30.3 bits (65), Expect = 1.1
 Identities = 12/26 (46%), Positives = 20/26 (76%)
 Frame = +3

Query: 258 ET*IQEMNYKQNLLACFCKGLLSYIV 335
           ET I+E++ K+N LAC+CK ++  I+
Sbjct: 877 ETRIEELHKKRNFLACYCKLVVYNII 902


>AY061410-1|AAL28958.1| 1127|Drosophila melanogaster LD34181p
           protein.
          Length = 1127

 Score = 30.3 bits (65), Expect = 1.1
 Identities = 12/26 (46%), Positives = 20/26 (76%)
 Frame = +3

Query: 258 ET*IQEMNYKQNLLACFCKGLLSYIV 335
           ET I+E++ K+N LAC+CK ++  I+
Sbjct: 888 ETRIEELHKKRNFLACYCKLVVYNII 913


>AE014134-1198|AAF52463.2| 1127|Drosophila melanogaster CG3423-PA
           protein.
          Length = 1127

 Score = 30.3 bits (65), Expect = 1.1
 Identities = 12/26 (46%), Positives = 20/26 (76%)
 Frame = +3

Query: 258 ET*IQEMNYKQNLLACFCKGLLSYIV 335
           ET I+E++ K+N LAC+CK ++  I+
Sbjct: 888 ETRIEELHKKRNFLACYCKLVVYNII 913


>AY084195-1|AAL89933.1|  152|Drosophila melanogaster RH07980p
           protein.
          Length = 152

 Score = 27.9 bits (59), Expect = 5.8
 Identities = 11/23 (47%), Positives = 18/23 (78%)
 Frame = +3

Query: 267 IQEMNYKQNLLACFCKGLLSYIV 335
           I++MN+ +  ++CF  GLLSY+V
Sbjct: 106 IEQMNFLKFEVSCFVIGLLSYLV 128


>AE014296-364|AAF47574.1|  152|Drosophila melanogaster CG1935-PA
           protein.
          Length = 152

 Score = 27.9 bits (59), Expect = 5.8
 Identities = 11/23 (47%), Positives = 18/23 (78%)
 Frame = +3

Query: 267 IQEMNYKQNLLACFCKGLLSYIV 335
           I++MN+ +  ++CF  GLLSY+V
Sbjct: 106 IEQMNFLKFEVSCFVIGLLSYLV 128


>AB016494-1|BAA34304.1|  152|Drosophila melanogaster dJTB-like
           protein.
          Length = 152

 Score = 27.9 bits (59), Expect = 5.8
 Identities = 11/23 (47%), Positives = 18/23 (78%)
 Frame = +3

Query: 267 IQEMNYKQNLLACFCKGLLSYIV 335
           I++MN+ +  ++CF  GLLSY+V
Sbjct: 106 IEQMNFLKFEVSCFVIGLLSYLV 128


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,952,560
Number of Sequences: 53049
Number of extensions: 263011
Number of successful extensions: 430
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 427
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 430
length of database: 24,988,368
effective HSP length: 78
effective length of database: 20,850,546
effective search space used: 1271883306
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)