Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fe100P05_F_I23
         (419 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY569697-1|AAS86650.1|  413|Apis mellifera complementary sex det...    23   1.4  
D79207-1|BAA23639.1|  432|Apis mellifera milk protein protein.         21   4.3  
AF388203-1|AAM73637.1|  432|Apis mellifera major royal jelly pro...    21   4.3  
AF000633-1|AAC61895.1|  432|Apis mellifera major royal jelly pro...    21   4.3  
DQ325090-1|ABD14104.1|  178|Apis mellifera complementary sex det...    21   5.6  
AY569705-1|AAS86658.1|  419|Apis mellifera complementary sex det...    21   5.6  

>AY569697-1|AAS86650.1|  413|Apis mellifera complementary sex
           determiner protein.
          Length = 413

 Score = 23.0 bits (47), Expect = 1.4
 Identities = 8/21 (38%), Positives = 14/21 (66%)
 Frame = -3

Query: 354 SHDFNYVLYNLTIPYRNMLIN 292
           ++ +NY  YN  + Y+N +IN
Sbjct: 328 NYKYNYNNYNKKLYYKNYIIN 348


>D79207-1|BAA23639.1|  432|Apis mellifera milk protein protein.
          Length = 432

 Score = 21.4 bits (43), Expect = 4.3
 Identities = 6/13 (46%), Positives = 13/13 (100%)
 Frame = -1

Query: 209 AVNRSLPLLHQFQ 171
           ++N+SLP+LH+++
Sbjct: 26  SLNKSLPILHEWK 38


>AF388203-1|AAM73637.1|  432|Apis mellifera major royal jelly
           protein MRJP1 protein.
          Length = 432

 Score = 21.4 bits (43), Expect = 4.3
 Identities = 6/13 (46%), Positives = 13/13 (100%)
 Frame = -1

Query: 209 AVNRSLPLLHQFQ 171
           ++N+SLP+LH+++
Sbjct: 26  SLNKSLPILHEWK 38


>AF000633-1|AAC61895.1|  432|Apis mellifera major royal jelly
           protein MRJP1 protein.
          Length = 432

 Score = 21.4 bits (43), Expect = 4.3
 Identities = 6/13 (46%), Positives = 13/13 (100%)
 Frame = -1

Query: 209 AVNRSLPLLHQFQ 171
           ++N+SLP+LH+++
Sbjct: 26  SLNKSLPILHEWK 38


>DQ325090-1|ABD14104.1|  178|Apis mellifera complementary sex
           determiner protein.
          Length = 178

 Score = 21.0 bits (42), Expect = 5.6
 Identities = 8/17 (47%), Positives = 11/17 (64%)
 Frame = -3

Query: 342 NYVLYNLTIPYRNMLIN 292
           NY  YN  + Y+N +IN
Sbjct: 96  NYNNYNKKLYYKNYIIN 112


>AY569705-1|AAS86658.1|  419|Apis mellifera complementary sex
           determiner protein.
          Length = 419

 Score = 21.0 bits (42), Expect = 5.6
 Identities = 8/17 (47%), Positives = 11/17 (64%)
 Frame = -3

Query: 342 NYVLYNLTIPYRNMLIN 292
           NY  YN  + Y+N +IN
Sbjct: 337 NYNNYNKKLYYKNYIIN 353


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 92,129
Number of Sequences: 438
Number of extensions: 1666
Number of successful extensions: 6
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 146,343
effective HSP length: 52
effective length of database: 123,567
effective search space used: 10750329
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)