Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fe100P05_F_I15
(465 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPBC56F2.04 |utp20||U3 snoRNP protein Utp20|Schizosaccharomyces ... 27 1.1
SPAC26A3.05 |chc1||clathrin heavy chain Chc1 |Schizosaccharomyce... 27 1.9
SPBC26H8.10 |dis3|rrp44|3'-5' exoribonuclease subunit Dis3 |Schi... 27 1.9
SPCC645.05c |myo2|rng5|myosin II heavy chain|Schizosaccharomyces... 26 2.5
SPBC19C7.03 |cyr1|git2|adenylate cyclase|Schizosaccharomyces pom... 25 5.7
SPCC1235.15 |dga1|SPCC548.01|diacylglycerol O-acyltransferase |S... 25 7.5
SPAP7G5.04c |lys1||aminoadipate-semialdehyde dehydrogenase |Schi... 25 7.5
SPAC9G1.09 |sid1||PAK-related kinase Sid1|Schizosaccharomyces po... 24 9.9
SPAC1D4.07c |||dubious|Schizosaccharomyces pombe|chr 1|||Manual 24 9.9
SPAC4F8.12c |spp42|cwf6|U5 snRNP complex subunit Spp42|Schizosac... 24 9.9
SPMIT.06 |||mitochondrial DNA binding endonuclease|Schizosacchar... 24 9.9
SPBPB21E7.05 ||SPAPB21E7.05, SPAPB21E7.05|sequence orphan|Schizo... 24 9.9
SPAC56F8.06c |alg10||dolichyl-phosphate-glucose-glycolipid alpha... 24 9.9
SPAC16A10.03c |||zinc finger protein Pep5/Vps11 |Schizosaccharom... 24 9.9
SPAC19B12.03 |bgs3||1,3-beta-glucan synthase subunit Bgs3|Schizo... 24 9.9
>SPBC56F2.04 |utp20||U3 snoRNP protein Utp20|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 2493
Score = 27.5 bits (58), Expect = 1.1
Identities = 15/47 (31%), Positives = 29/47 (61%)
Frame = +1
Query: 121 DEVGRTIGHGLVKNKLAACVNSIPGITSIYEWKNEINEDKETLLMIK 261
DE+ R + G+V NK +A +S+ ++YE+ + ++KET+ +K
Sbjct: 1810 DELCRRLSLGIVANKQSASQSSLIFCYNVYEF---VVKEKETVAALK 1853
>SPAC26A3.05 |chc1||clathrin heavy chain Chc1 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1666
Score = 26.6 bits (56), Expect = 1.9
Identities = 11/43 (25%), Positives = 22/43 (51%)
Frame = +1
Query: 229 NEDKETLLMIKTRTSQVDKLTEYVRSNHPYEVCEVISVPIKNG 357
N + + LL + + ++ EY+ Y+V E+ + I+NG
Sbjct: 1017 NANLQNLLFLTAIKADKSRVMEYIDKLDKYDVDEIAEIAIENG 1059
>SPBC26H8.10 |dis3|rrp44|3'-5' exoribonuclease subunit Dis3
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 970
Score = 26.6 bits (56), Expect = 1.9
Identities = 17/42 (40%), Positives = 22/42 (52%)
Frame = -2
Query: 452 TIIFILKTH*QLINLYSHSGTISPIHFRYGGLPFFMGTDITS 327
T++ IL T L Y SGT +P FR+ GL + T TS
Sbjct: 768 TLLRILTTRCMLSAEYFCSGTFAPPDFRHYGLASPIYTHFTS 809
>SPCC645.05c |myo2|rng5|myosin II heavy chain|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 1526
Score = 26.2 bits (55), Expect = 2.5
Identities = 15/40 (37%), Positives = 27/40 (67%), Gaps = 1/40 (2%)
Frame = +1
Query: 217 KNEINEDKETLL-MIKTRTSQVDKLTEYVRSNHPYEVCEV 333
K E NE ++L I T+ +++DKLT+Y+ S++ E+ E+
Sbjct: 973 KAEFNEQCKSLQETIVTKDAELDKLTKYI-SDYKTEIQEM 1011
>SPBC19C7.03 |cyr1|git2|adenylate cyclase|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 1692
Score = 25.0 bits (52), Expect = 5.7
Identities = 11/29 (37%), Positives = 17/29 (58%)
Frame = +2
Query: 8 HKSQYLVNNMLISLNRKTVLTFYLSITNI 94
H ++YLVN + L+ +TF L IT +
Sbjct: 519 HSTRYLVNLTYLDLSYNNFVTFPLIITEL 547
>SPCC1235.15 |dga1|SPCC548.01|diacylglycerol O-acyltransferase
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 345
Score = 24.6 bits (51), Expect = 7.5
Identities = 11/39 (28%), Positives = 20/39 (51%), Gaps = 4/39 (10%)
Frame = -1
Query: 411 SLFSFWHNISNPFQVWWITVLYGY----RYNLAYFVWMI 307
+L F H++S W TVL+ + + + Y +W+I
Sbjct: 31 ALAVFLHSVSLTLTASWYTVLWAFLPFWPFLIVYLIWLI 69
>SPAP7G5.04c |lys1||aminoadipate-semialdehyde dehydrogenase
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1419
Score = 24.6 bits (51), Expect = 7.5
Identities = 13/45 (28%), Positives = 23/45 (51%)
Frame = -3
Query: 226 FHFSTHK*MLFREWSLHRQQAYSSPDHDL*FFQLHHWVLSHIPPN 92
F F+T K + W + ++ + HD + L H+VL ++P N
Sbjct: 1291 FGFNT-KLSEYVNWRIALERFVINESHDSALYPLLHFVLDNLPAN 1334
>SPAC9G1.09 |sid1||PAK-related kinase Sid1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 471
Score = 24.2 bits (50), Expect = 9.9
Identities = 9/28 (32%), Positives = 16/28 (57%)
Frame = -2
Query: 362 GLPFFMGTDITSHTSYG*LERTYSVSLS 279
G PF+M ++ TSYG +S+ ++
Sbjct: 167 GTPFWMAPEVIQQTSYGLAADIWSLGIT 194
>SPAC1D4.07c |||dubious|Schizosaccharomyces pombe|chr 1|||Manual
Length = 146
Score = 24.2 bits (50), Expect = 9.9
Identities = 9/23 (39%), Positives = 15/23 (65%)
Frame = +2
Query: 185 PFPE*HLFMSGKMKLMKIKRPYL 253
P P H++MS +K+ K +P+L
Sbjct: 90 PSPPVHIYMSALIKVCKKSKPHL 112
>SPAC4F8.12c |spp42|cwf6|U5 snRNP complex subunit
Spp42|Schizosaccharomyces pombe|chr 1|||Manual
Length = 2363
Score = 24.2 bits (50), Expect = 9.9
Identities = 7/12 (58%), Positives = 8/12 (66%)
Frame = -3
Query: 127 LHHWVLSHIPPN 92
+ HW L H PPN
Sbjct: 450 IKHWYLEHCPPN 461
>SPMIT.06 |||mitochondrial DNA binding
endonuclease|Schizosaccharomyces pombe|chr
mitochondrial|||Manual
Length = 807
Score = 24.2 bits (50), Expect = 9.9
Identities = 13/66 (19%), Positives = 28/66 (42%)
Frame = +1
Query: 55 ENCFNFLSINNKYSVVYVTVPNDEVGRTIGHGLVKNKLAACVNSIPGITSIYEWKNEINE 234
+N ++F+ +++ + D V RT+ H L + SIY++ +
Sbjct: 638 DNYYSFVHNRGRFATYVYFIIKDCVLRTLAHKLSLGTRMKVIKKFGPDLSIYDYNSRDEN 697
Query: 235 DKETLL 252
+K L+
Sbjct: 698 NKPKLI 703
>SPBPB21E7.05 ||SPAPB21E7.05, SPAPB21E7.05|sequence
orphan|Schizosaccharomyces pombe|chr 2|||Manual
Length = 127
Score = 24.2 bits (50), Expect = 9.9
Identities = 9/20 (45%), Positives = 13/20 (65%)
Frame = +3
Query: 285 TNRVCTLQSSIRSMRGYIGT 344
T +C ++SI SMR Y+ T
Sbjct: 66 TKSICNSKTSINSMRQYLAT 85
>SPAC56F8.06c |alg10||dolichyl-phosphate-glucose-glycolipid
alpha-glucosyltransferase Alg10|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 445
Score = 24.2 bits (50), Expect = 9.9
Identities = 6/22 (27%), Positives = 14/22 (63%)
Frame = -1
Query: 375 FQVWWITVLYGYRYNLAYFVWM 310
F++WW+ L + Y + Y+ ++
Sbjct: 334 FRIWWLKYLGPFSYLILYYFFL 355
>SPAC16A10.03c |||zinc finger protein Pep5/Vps11
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 860
Score = 24.2 bits (50), Expect = 9.9
Identities = 12/27 (44%), Positives = 18/27 (66%)
Frame = +1
Query: 244 TLLMIKTRTSQVDKLTEYVRSNHPYEV 324
TL+ + + ++DKLTEYV S P E+
Sbjct: 445 TLIYLYIKLRKLDKLTEYV-SGCPTEI 470
>SPAC19B12.03 |bgs3||1,3-beta-glucan synthase subunit
Bgs3|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1826
Score = 24.2 bits (50), Expect = 9.9
Identities = 11/29 (37%), Positives = 20/29 (68%), Gaps = 3/29 (10%)
Frame = -1
Query: 198 YSGNGVYTGSKLI---LHQTMTYSSSNFI 121
Y+G+ +Y GS+LI L TMT +++++
Sbjct: 1415 YTGSSIYLGSRLIMMLLFGTMTVWTTHYV 1443
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 1,973,252
Number of Sequences: 5004
Number of extensions: 42378
Number of successful extensions: 97
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 96
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 97
length of database: 2,362,478
effective HSP length: 67
effective length of database: 2,027,210
effective search space used: 176367270
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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