Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fe100P05_F_I15
         (465 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z46242-6|CAA86327.3|  115|Caenorhabditis elegans Hypothetical pr...    84   4e-17
AC024208-2|AAF36055.1|  204|Caenorhabditis elegans Hypothetical ...    32   0.23 
Z75536-2|CAA99830.2| 4171|Caenorhabditis elegans Hypothetical pr...    29   2.2  
Z68227-1|CAA92507.1|  320|Caenorhabditis elegans Hypothetical pr...    28   3.8  
Z71261-2|CAA95805.1|  813|Caenorhabditis elegans Hypothetical pr...    27   6.6  
U41009-1|AAA82278.3|  501|Caenorhabditis elegans Hypothetical pr...    27   8.8  

>Z46242-6|CAA86327.3|  115|Caenorhabditis elegans Hypothetical
           protein F35G12.7 protein.
          Length = 115

 Score = 84.2 bits (199), Expect = 4e-17
 Identities = 41/100 (41%), Positives = 60/100 (60%)
 Frame = +1

Query: 88  KYSVVYVTVPNDEVGRTIGHGLVKNKLAACVNSIPGITSIYEWKNEINEDKETLLMIKTR 267
           K  V YVT P+ EV  T+    V   LAAC N IP +TS+Y+W+ +I ED+E ++++KT 
Sbjct: 7   KMVVAYVTAPSKEVAMTVARTTVTEALAACANVIPEVTSVYKWQGKIEEDQEHVVILKTV 66

Query: 268 TSQVDKLTEYVRSNHPYEVCEVISVPIKNGNPPYLKWIGD 387
            S+V++L+  VRS HP E     ++ I    P +  WI D
Sbjct: 67  ESKVEELSARVRSLHPAETPCFFTLAIDKITPDFGGWIVD 106


>AC024208-2|AAF36055.1|  204|Caenorhabditis elegans Hypothetical
           protein Y75B7B.2 protein.
          Length = 204

 Score = 31.9 bits (69), Expect = 0.23
 Identities = 14/44 (31%), Positives = 25/44 (56%), Gaps = 1/44 (2%)
 Frame = +1

Query: 217 KNEINEDKETLLMIKTRTSQVDKLTEYVRSNHPY-EVCEVISVP 345
           KN I     TLL  +T+T + + LT+ +  N  Y ++C++  +P
Sbjct: 19  KNGIKNGNHTLLCYETKTEEQNPLTKLIEDNVEYSKLCQLCKIP 62


>Z75536-2|CAA99830.2| 4171|Caenorhabditis elegans Hypothetical
           protein F18C12.1 protein.
          Length = 4171

 Score = 28.7 bits (61), Expect = 2.2
 Identities = 24/104 (23%), Positives = 43/104 (41%), Gaps = 9/104 (8%)
 Frame = +1

Query: 67  NFLSINNKYSVVYVTVPNDEVGRTIGHGLVKNKLAACV-----NSIPGITSIYEWKNE-I 228
           N +  NN++  + + + +      I HG VKN +   +          +   YEW  E I
Sbjct: 670 NIVKQNNEWKEIILKIRSKMKEEEIVHGAVKNNMKPWLIHWDFQLYKALLIQYEWGIESI 729

Query: 229 NEDKETL---LMIKTRTSQVDKLTEYVRSNHPYEVCEVISVPIK 351
                T+   L+   +  Q+    E +RS +  E+C  + +P K
Sbjct: 730 QSQLSTISVSLVFADQKIQLRPTIEEIRSKYYKELCRFLRIPDK 773


>Z68227-1|CAA92507.1|  320|Caenorhabditis elegans Hypothetical
           protein F49C12.2 protein.
          Length = 320

 Score = 27.9 bits (59), Expect = 3.8
 Identities = 13/34 (38%), Positives = 17/34 (50%)
 Frame = +1

Query: 40  DFFKQENCFNFLSINNKYSVVYVTVPNDEVGRTI 141
           D  K+   FN L + NK  + Y   PN EV  T+
Sbjct: 97  DNLKEYESFNILPVANKDEIKYFIPPNKEVPMTM 130


>Z71261-2|CAA95805.1|  813|Caenorhabditis elegans Hypothetical
           protein F21C3.2 protein.
          Length = 813

 Score = 27.1 bits (57), Expect = 6.6
 Identities = 14/39 (35%), Positives = 19/39 (48%)
 Frame = -2

Query: 149 P*PIVLPTSSLGTVTYTTEYLLLIDKKLKQFSCLKKSAC 33
           P P + PT  + TV   +E  L I  K  Q SC  ++ C
Sbjct: 560 PPPTIQPTKPVVTVEVFSETCLKIRLKFFQTSCFNENEC 598


>U41009-1|AAA82278.3|  501|Caenorhabditis elegans Hypothetical
           protein C06E7.2 protein.
          Length = 501

 Score = 26.6 bits (56), Expect = 8.8
 Identities = 11/40 (27%), Positives = 21/40 (52%)
 Frame = +3

Query: 285 TNRVCTLQSSIRSMRGYIGTHKER*STIPEMDWRYCARMR 404
           +NR+CTL+  I ++    G H  R S +  + +  C+  +
Sbjct: 94  SNRICTLEVHIPALNMLFGDHLFRYSLLNSLPYASCSHSK 133


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,550,117
Number of Sequences: 27780
Number of extensions: 222595
Number of successful extensions: 485
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 473
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 484
length of database: 12,740,198
effective HSP length: 76
effective length of database: 10,628,918
effective search space used: 829055604
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)