Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fe100P05_F_I10
         (651 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC068439-1|AAH68439.1|  480|Homo sapiens chromosome 19 open read...   198   1e-50
BC036706-1|AAH36706.1|  471|Homo sapiens C19orf28 protein protein.    173   5e-43
AB065892-1|BAC06108.1|  347|Homo sapiens seven transmembrane hel...    32   1.5  

>BC068439-1|AAH68439.1|  480|Homo sapiens chromosome 19 open reading
           frame 28 protein.
          Length = 480

 Score =  198 bits (483), Expect = 1e-50
 Identities = 88/158 (55%), Positives = 113/158 (71%), Gaps = 1/158 (0%)
 Frame = +1

Query: 181 SLKLQLGYGIGHVLNDVCASLWFTYFLVYFKLVLEFSNVQSGTLMLVGQMVDALATPFIG 360
           SL  +L Y +GH LND+CAS+WFTY L+Y   V  +S+  +G L+L+GQ+ D L TP +G
Sbjct: 18  SLVARLSYAVGHFLNDLCASMWFTYLLLYLHSVRAYSSRGAGLLLLLGQVADGLCTPLVG 77

Query: 361 YHSDHTDNFWSAKYGRRKLWHLFGTICVVTSFPFIFSECVGC-SLTHRWAQMYYFAAFIV 537
           Y +D   +   A+YG RK WHL GT+CV+ SFPFIFS C+GC + T  WA + Y+  FIV
Sbjct: 78  YEADRAASC-CARYGPRKAWHLVGTVCVLLSFPFIFSPCLGCGAATPEWAALLYYGPFIV 136

Query: 538 IFQIGWAAVQISHLSLIPELAQDDHTRTHLTAIRYAFT 651
           IFQ GWA+ QISHLSLIPEL  +DH +  LTA+RYAFT
Sbjct: 137 IFQFGWASTQISHLSLIPELVTNDHEKVELTALRYAFT 174


>BC036706-1|AAH36706.1|  471|Homo sapiens C19orf28 protein protein.
          Length = 471

 Score =  173 bits (421), Expect = 5e-43
 Identities = 82/158 (51%), Positives = 107/158 (67%), Gaps = 1/158 (0%)
 Frame = +1

Query: 181 SLKLQLGYGIGHVLNDVCASLWFTYFLVYFKLVLEFSNVQSGTLMLVGQMVDALATPFIG 360
           SL  +L Y +GH LND+CAS+WFTY L+Y   V  +S+  +G L+L+GQ+ D L TP +G
Sbjct: 18  SLVARLSYAVGHFLNDLCASMWFTYLLLYLHSVRAYSSRGAGLLLLLGQVADGLCTPLVG 77

Query: 361 YHSDHTDNFWSAKYGRRKLWHLFGTICVVTSFPFIFSECVGC-SLTHRWAQMYYFAAFIV 537
           Y +D   +   A+YG         T+CV+ SFPFIFS C+GC + T  WA + Y+  FIV
Sbjct: 78  YEADRAASC-CARYG---------TVCVLLSFPFIFSPCLGCGAATPEWAALLYYGPFIV 127

Query: 538 IFQIGWAAVQISHLSLIPELAQDDHTRTHLTAIRYAFT 651
           IFQ GWA+ QISHLSLIPEL  +DH +  LTA+RYAFT
Sbjct: 128 IFQFGWASTQISHLSLIPELVTNDHEKVELTALRYAFT 165


>AB065892-1|BAC06108.1|  347|Homo sapiens seven transmembrane helix
           receptor protein.
          Length = 347

 Score = 32.3 bits (70), Expect = 1.5
 Identities = 15/53 (28%), Positives = 24/53 (45%)
 Frame = -2

Query: 251 VNHKLAQXXXXXXXXXXXXXXLRLVDISINSLSILCFLVSVLYHYFLVLLAIV 93
           +NH                  + L+D  ++S+ ILC +V V Y Y  ++L IV
Sbjct: 173 INHFFCDSGPLLALACADTTAIELMDFMLSSMVILCCIVLVAYSYTYIILTIV 225


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 94,672,479
Number of Sequences: 237096
Number of extensions: 2019350
Number of successful extensions: 3321
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 3214
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3317
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 7253890590
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)