Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fe100P05_F_I10
         (651 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U55376-5|AAA98007.1|  501|Caenorhabditis elegans Hypothetical pr...   173   9e-44
Z81497-4|CAB04079.2|  458|Caenorhabditis elegans Hypothetical pr...    31   0.94 
Z81117-7|CAB03315.2|  329|Caenorhabditis elegans Hypothetical pr...    30   1.2  
Z83129-2|CAB63327.1|  318|Caenorhabditis elegans Hypothetical pr...    28   6.6  

>U55376-5|AAA98007.1|  501|Caenorhabditis elegans Hypothetical
           protein F16H11.1 protein.
          Length = 501

 Score =  173 bits (421), Expect = 9e-44
 Identities = 80/165 (48%), Positives = 112/165 (67%), Gaps = 4/165 (2%)
 Frame = +1

Query: 169 DISTSLKLQLGYGIGHVLNDVCASLWFTYFLVYFKLVLEFSNVQSGTLMLVGQMVDALAT 348
           D   S   ++ +GIGH  ND+CAS+WFTYF++Y + VL+F + ++G LML+GQ+ DA++T
Sbjct: 29  DHDISFTKKIAFGIGHFYNDLCASMWFTYFMIYMEKVLKFQSSRAGMLMLIGQVTDAIST 88

Query: 349 PFIGYHSDHTDNFWSA---KYGRRKLWHLFGTICVVTSFPFIFSECVGC-SLTHRWAQMY 516
           P +G  SD   N   A   K GRR  WHL GT+ V  SFP IF++C  C S T  W ++ 
Sbjct: 89  PLVGIFSD--SNILPACFDKIGRRMSWHLIGTVLVSLSFPMIFNKCFLCKSTTSEWLKVL 146

Query: 517 YFAAFIVIFQIGWAAVQISHLSLIPELAQDDHTRTHLTAIRYAFT 651
           +F  FI++FQ GWA+VQISHL+LIPEL+    +R  + ++RYAFT
Sbjct: 147 WFVPFIMVFQFGWASVQISHLALIPELSSVPASRATMNSLRYAFT 191


>Z81497-4|CAB04079.2|  458|Caenorhabditis elegans Hypothetical
           protein F10C2.7 protein.
          Length = 458

 Score = 30.7 bits (66), Expect = 0.94
 Identities = 16/44 (36%), Positives = 25/44 (56%)
 Frame = +1

Query: 241 LWFTYFLVYFKLVLEFSNVQSGTLMLVGQMVDALATPFIGYHSD 372
           L  TY  +YF+ VL+FS V++G L+ +  +    A    G+ SD
Sbjct: 264 LLLTYSPIYFRKVLDFSVVETGMLISLSAVAHMPAKLLSGWLSD 307


>Z81117-7|CAB03315.2|  329|Caenorhabditis elegans Hypothetical
           protein T06E6.6 protein.
          Length = 329

 Score = 30.3 bits (65), Expect = 1.2
 Identities = 14/58 (24%), Positives = 23/58 (39%)
 Frame = +3

Query: 366 LGSYRQFLECKIWKTEALAFVWYNLCCDLISIYLF*MCWMFIDTQMGSNVLFCCFYCH 539
           L      L+ K         V + + C +  +Y+   C++    Q  +N  F CF CH
Sbjct: 220 LSQQTMMLQRKFLLANYTQIVSFFITCFIPYLYIMICCYLNYHNQSANNFAFICFSCH 277


>Z83129-2|CAB63327.1|  318|Caenorhabditis elegans Hypothetical
           protein W06G6.3 protein.
          Length = 318

 Score = 27.9 bits (59), Expect = 6.6
 Identities = 15/37 (40%), Positives = 22/37 (59%)
 Frame = +1

Query: 232 CASLWFTYFLVYFKLVLEFSNVQSGTLMLVGQMVDAL 342
           C SLW  +FLV F L  + + +   T++L  Q+V AL
Sbjct: 193 CGSLWIRHFLVRF-LKEKTARLSKTTILLNMQLVKAL 228


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,519,187
Number of Sequences: 27780
Number of extensions: 338148
Number of successful extensions: 942
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 919
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 940
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1444744186
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)