Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fe100P05_F_H06
(518 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
05_07_0347 - 29440541-29440664,29440908-29441020,29441522-294416... 201 3e-52
07_03_0445 - 18281715-18281832,18282274-18282505,18283486-182835... 193 8e-50
12_02_0695 + 22220054-22220056,22221226-22221276,22221415-222215... 192 1e-49
10_08_0945 - 21738643-21738760,21740056-21740287,21740582-217406... 190 4e-49
01_06_0319 - 28441082-28441102,28441630-28441701,28442568-284426... 28 3.9
10_08_1046 + 22542074-22544749,22544837-22545544 27 6.8
06_03_0999 - 26752410-26752523,26752601-26752830,26752914-267531... 27 6.8
03_01_0016 + 131141-131236,131743-132043,132125-132341,132440-13... 27 6.8
01_06_0986 - 33602714-33602741,33603037-33603146,33603401-336036... 27 6.8
01_03_0131 - 12858377-12858664,12859585-12859975,12863357-128633... 27 6.8
08_01_0455 + 4012857-4013735 27 9.0
05_01_0429 + 3399266-3399708,3401320-3401382,3403919-3404345,340... 27 9.0
>05_07_0347 -
29440541-29440664,29440908-29441020,29441522-29441689,
29442341-29442391,29442518-29442555,29442885-29442978
Length = 195
Score = 201 bits (490), Expect = 3e-52
Identities = 91/147 (61%), Positives = 112/147 (76%)
Frame = +1
Query: 73 AEQRERTFIMVKPDGVQRGLVGTIIERFEKKGFKLVGLKFVWPSEELLQQHYSDLASRPF 252
A + ERTFI +KPDGVQRGL+ I+ RFE+KGFKLV +K V PS+E Q+HY DL RPF
Sbjct: 42 AAEMERTFIAIKPDGVQRGLISEILSRFERKGFKLVAIKLVVPSKEFAQKHYHDLKDRPF 101
Query: 253 FPGLVKYMSSGPVVPMVWEGLNVVKTGRQMLGATNPXDSQPGTIRGDLCIQVGRNIIHGS 432
F GL ++SSGPV+ MVWEG V+K GR+++GAT+P S+PGTIRGDL + VGRNIIHGS
Sbjct: 102 FNGLCDFLSSGPVLAMVWEGEGVIKYGRKLIGATDPQKSEPGTIRGDLAVVVGRNIIHGS 161
Query: 433 DSVESAKKEIGLWFTDXEVVGWTPANE 513
D E+AK EIGLWF E+V +T E
Sbjct: 162 DGPETAKAEIGLWFEPRELVSYTSNEE 188
>07_03_0445 -
18281715-18281832,18282274-18282505,18283486-18283534,
18283733-18283783
Length = 149
Score = 193 bits (470), Expect = 8e-50
Identities = 84/132 (63%), Positives = 107/132 (81%)
Frame = +1
Query: 85 ERTFIMVKPDGVQRGLVGTIIERFEKKGFKLVGLKFVWPSEELLQQHYSDLASRPFFPGL 264
E++FIM+KPDGVQRGL+G II RFEKKGF L G+KF+ QQHY+DL+ +PFFPGL
Sbjct: 2 EQSFIMIKPDGVQRGLIGDIISRFEKKGFYLRGMKFMNVERSFAQQHYADLSDKPFFPGL 61
Query: 265 VKYMSSGPVVPMVWEGLNVVKTGRQMLGATNPXDSQPGTIRGDLCIQVGRNIIHGSDSVE 444
V+Y+ SGPVV MVWEG +VV TGR+++GAT P ++ PGTIR D ++VGRN+IHGSDSV+
Sbjct: 62 VEYIISGPVVAMVWEGKDVVATGRRIIGATRPWEAAPGTIRADYAVEVGRNVIHGSDSVD 121
Query: 445 SAKKEIGLWFTD 480
+ KKEI LWF +
Sbjct: 122 NGKKEIALWFPE 133
>12_02_0695 +
22220054-22220056,22221226-22221276,22221415-22221501,
22222064-22222144,22222241-22222353,22222482-22222531,
22222790-22222857
Length = 150
Score = 192 bits (469), Expect = 1e-49
Identities = 82/138 (59%), Positives = 108/138 (78%)
Frame = +1
Query: 85 ERTFIMVKPDGVQRGLVGTIIERFEKKGFKLVGLKFVWPSEELLQQHYSDLASRPFFPGL 264
E+++IM+KPDGVQRGLVG II RFEKKGF L GLK ++L Q+HY DL +PFFPGL
Sbjct: 3 EQSYIMIKPDGVQRGLVGEIISRFEKKGFVLKGLKLFQCPKDLAQEHYKDLKEKPFFPGL 62
Query: 265 VKYMSSGPVVPMVWEGLNVVKTGRQMLGATNPXDSQPGTIRGDLCIQVGRNIIHGSDSVE 444
++Y++SGPVV M WEG VV + R+++GATNP ++PGTIRGDL +Q GRN++HGSDS +
Sbjct: 63 IEYITSGPVVCMAWEGNGVVASARKLIGATNPLQAEPGTIRGDLAVQTGRNVVHGSDSPD 122
Query: 445 SAKKEIGLWFTDXEVVGW 498
+ K+EI LWF + E+ W
Sbjct: 123 NGKREIALWFKEGELCEW 140
>10_08_0945 -
21738643-21738760,21740056-21740287,21740582-21740630,
21740720-21740776
Length = 151
Score = 190 bits (464), Expect = 4e-49
Identities = 82/132 (62%), Positives = 107/132 (81%)
Frame = +1
Query: 85 ERTFIMVKPDGVQRGLVGTIIERFEKKGFKLVGLKFVWPSEELLQQHYSDLASRPFFPGL 264
E+TFIM+KPDGVQRGL+G +I RFEKKGF L +K + + ++HY+DL+S+PFF GL
Sbjct: 4 EQTFIMIKPDGVQRGLIGEVIGRFEKKGFYLKAMKLINVEKSFAEKHYADLSSKPFFGGL 63
Query: 265 VKYMSSGPVVPMVWEGLNVVKTGRQMLGATNPXDSQPGTIRGDLCIQVGRNIIHGSDSVE 444
V+Y+ SGPVV MVWEG VV TGR+++GATNP ++PGTIRGD + +GRN+IHGSDSVE
Sbjct: 64 VEYIVSGPVVAMVWEGKQVVSTGRKLVGATNPLAAEPGTIRGDFAVDIGRNVIHGSDSVE 123
Query: 445 SAKKEIGLWFTD 480
+A+KEI LWF +
Sbjct: 124 NARKEIALWFPE 135
>01_06_0319 -
28441082-28441102,28441630-28441701,28442568-28442627,
28442918-28443105,28444300-28444327,28444880-28444907,
28444942-28445163,28445238-28445409,28446224-28447468,
28447573-28447741,28447820-28448045,28449096-28449451,
28449530-28449724,28450655-28450864,28451729-28452004
Length = 1155
Score = 28.3 bits (60), Expect = 3.9
Identities = 20/59 (33%), Positives = 28/59 (47%), Gaps = 2/59 (3%)
Frame = -1
Query: 335 RPVFTTLRPSHTIGTTGPELMYFTRPGKKGRDAKSL*CCWRS--SSDGHTNFKPTSLKP 165
RP S+T + P+ +RPGK+G DA+S+ S S T +P S KP
Sbjct: 529 RPFCPCASRSNTDASLHPQTENGSRPGKRGNDAESVPGTNGSDLSQTDDTEARPCSKKP 587
>10_08_1046 + 22542074-22544749,22544837-22545544
Length = 1127
Score = 27.5 bits (58), Expect = 6.8
Identities = 18/58 (31%), Positives = 27/58 (46%)
Frame = +1
Query: 85 ERTFIMVKPDGVQRGLVGTIIERFEKKGFKLVGLKFVWPSEELLQQHYSDLASRPFFP 258
ER +VK +G G FE KG G +WP ++ + H +L S+P+ P
Sbjct: 195 ERRLSLVKQNGGAPGEFDHNRWLFETKGTYGYG-NAIWPEDDGVAGHPKELMSKPWRP 251
>06_03_0999 -
26752410-26752523,26752601-26752830,26752914-26753169,
26753763-26753828,26753921-26754046,26754148-26754288,
26754377-26754387,26754523-26754670,26755326-26755454,
26755573-26755710,26755808-26755876,26755955-26756023,
26756565-26756720,26756885-26756985,26757068-26757215,
26757540-26757702,26757833-26757965,26758049-26758226,
26758330-26758572,26758664-26758732,26759063-26759187,
26759727-26759766,26760756-26760812,26762831-26762935
Length = 1004
Score = 27.5 bits (58), Expect = 6.8
Identities = 23/71 (32%), Positives = 39/71 (54%), Gaps = 3/71 (4%)
Frame = +1
Query: 67 MMAEQRERTFIMVKPDGVQRGLV-GTIIERFEKKGFKLVGLKFVWPSEELLQQHYSD--L 237
M E ER ++KP+ R L G+ ++F +KL+G+K +PS+++ + SD L
Sbjct: 628 MDQELAERQLDVIKPNLQSRMLKEGSEYDQF----WKLLGVKSEYPSQKIAKDQESDPHL 683
Query: 238 ASRPFFPGLVK 270
S F G++K
Sbjct: 684 FSCTFSKGVLK 694
>03_01_0016 + 131141-131236,131743-132043,132125-132341,132440-132773,
132883-132996,133065-133193,133293-133469,133555-133746,
134844-134981,135327-135559,135900-136003,136633-136727,
136817-137053,137801-137922,138252-138354,138750-138826,
138909-139017,139107-139253,139953-140000,140292-140492,
140589-140738,140917-141002,141088-141193,141278-141373,
141759-141911,142647-142819,142923-142986,144056-144193,
144548-144595,144690-144836,144907-144968,146540-146645,
147357-147461,147548-147679,147765-147974,148070-148171,
148261-148398
Length = 1729
Score = 27.5 bits (58), Expect = 6.8
Identities = 10/20 (50%), Positives = 16/20 (80%)
Frame = -2
Query: 238 PNRCSVAGEVLLMAIRISNR 179
PN+CS+ ++LL+A+RI R
Sbjct: 1388 PNKCSLLPKILLVAVRIIQR 1407
>01_06_0986 -
33602714-33602741,33603037-33603146,33603401-33603601,
33604605-33604697,33604937-33605182,33606007-33606372,
33606459-33606599,33607170-33607526
Length = 513
Score = 27.5 bits (58), Expect = 6.8
Identities = 11/20 (55%), Positives = 14/20 (70%)
Frame = +1
Query: 238 ASRPFFPGLVKYMSSGPVVP 297
ASRPF PGL++ PV+P
Sbjct: 22 ASRPFLPGLLEAALRAPVLP 41
>01_03_0131 -
12858377-12858664,12859585-12859975,12863357-12863397,
12864745-12865419
Length = 464
Score = 27.5 bits (58), Expect = 6.8
Identities = 10/25 (40%), Positives = 16/25 (64%)
Frame = -3
Query: 159 FETFNNGAHKTTLYTIRLNHNKSTL 85
+ F +K T+YT+RL+HN+ L
Sbjct: 421 YRAFTWAEYKRTMYTLRLSHNRLDL 445
>08_01_0455 + 4012857-4013735
Length = 292
Score = 27.1 bits (57), Expect = 9.0
Identities = 10/17 (58%), Positives = 12/17 (70%)
Frame = -2
Query: 157 RNVQ*WCPQDHVVHHQA 107
R V WCPQD V+ H+A
Sbjct: 166 RCVATWCPQDRVLRHRA 182
>05_01_0429 +
3399266-3399708,3401320-3401382,3403919-3404345,
3404863-3405141
Length = 403
Score = 27.1 bits (57), Expect = 9.0
Identities = 12/29 (41%), Positives = 20/29 (68%)
Frame = -3
Query: 159 FETFNNGAHKTTLYTIRLNHNKSTLTLFR 73
+ +F +KTT+Y++RL+H S L LF+
Sbjct: 363 YRSFTWAEYKTTMYSLRLSH--SRLELFK 389
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,102,268
Number of Sequences: 37544
Number of extensions: 276729
Number of successful extensions: 657
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 645
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 657
length of database: 14,793,348
effective HSP length: 77
effective length of database: 11,902,460
effective search space used: 1130733700
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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