Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fe100P05_F_H06
         (518 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ435329-1|ABD92644.1|  150|Apis mellifera OBP12 protein.              22   3.3  
EF625899-1|ABR45906.1| 1010|Apis mellifera high Glx storage prot...    21   5.7  
DQ667188-1|ABG75740.1|  383|Apis mellifera histamine-gated chlor...    21   5.7  

>DQ435329-1|ABD92644.1|  150|Apis mellifera OBP12 protein.
          Length = 150

 Score = 22.2 bits (45), Expect = 3.3
 Identities = 11/31 (35%), Positives = 16/31 (51%)
 Frame = -3

Query: 102 HNKSTLTLFRHHEILLTCIN*LHVXYSQAND 10
           H+   L  F  H+I LTC + +H  +   ND
Sbjct: 101 HDDEDLKTF-FHKIALTCEDDVHRKFLHVND 130


>EF625899-1|ABR45906.1| 1010|Apis mellifera high Glx storage protein
            protein.
          Length = 1010

 Score = 21.4 bits (43), Expect = 5.7
 Identities = 11/47 (23%), Positives = 22/47 (46%)
 Frame = +1

Query: 277  SSGPVVPMVWEGLNVVKTGRQMLGATNPXDSQPGTIRGDLCIQVGRN 417
            S+  V  +   G  +V +G+Q  G      +QP T++  +  +  +N
Sbjct: 909  SNSQVQGVAVPGSGIVASGQQHAGGWQSIYAQPQTVQDQIVSEYYQN 955


>DQ667188-1|ABG75740.1|  383|Apis mellifera histamine-gated chloride
           channel protein.
          Length = 383

 Score = 21.4 bits (43), Expect = 5.7
 Identities = 6/19 (31%), Positives = 14/19 (73%)
 Frame = -1

Query: 479 SVNQRPISFLADSTLSEPW 423
           S+N+  ++++AD  L++ W
Sbjct: 43  SINEESMTYVADIFLAQSW 61


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 144,128
Number of Sequences: 438
Number of extensions: 2794
Number of successful extensions: 4
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4
length of database: 146,343
effective HSP length: 54
effective length of database: 122,691
effective search space used: 14477538
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)