Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fe100P05_F_G22
         (652 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z81095-4|CAB03160.1|  262|Caenorhabditis elegans Hypothetical pr...    66   2e-11
Z81089-7|CAB03139.1|  262|Caenorhabditis elegans Hypothetical pr...    66   2e-11
Z73975-1|CAA98276.1|  282|Caenorhabditis elegans Hypothetical pr...    59   3e-09
Z49207-8|CAJ85773.1|  455|Caenorhabditis elegans Hypothetical pr...    33   0.23 
Z49207-7|CAA89072.1|  512|Caenorhabditis elegans Hypothetical pr...    33   0.23 
AC006642-3|AAF39832.2|  410|Caenorhabditis elegans Acyltransfera...    31   0.94 
AC006642-2|AAF39831.1|  617|Caenorhabditis elegans Acyltransfera...    31   0.94 
Z81050-8|CAB02859.1|  371|Caenorhabditis elegans Hypothetical pr...    30   1.6  
Z74472-7|CAA98944.1|  182|Caenorhabditis elegans Hypothetical pr...    28   5.0  
U41029-3|AAF99952.2|  886|Caenorhabditis elegans Hypothetical pr...    28   6.6  
U13019-2|AAM15600.1|  192|Caenorhabditis elegans Homolog of odr-...    27   8.7  
U13019-1|AAM15601.1|  196|Caenorhabditis elegans Homolog of odr-...    27   8.7  
AL110482-9|CAB60340.3|  372|Caenorhabditis elegans Hypothetical ...    27   8.7  
AF016445-1|AAC69057.2|  367|Caenorhabditis elegans Serpentine re...    27   8.7  

>Z81095-4|CAB03160.1|  262|Caenorhabditis elegans Hypothetical
           protein F59F4.4 protein.
          Length = 262

 Score = 66.5 bits (155), Expect = 2e-11
 Identities = 36/89 (40%), Positives = 56/89 (62%)
 Frame = +1

Query: 241 KILKHVTKIMNLKWELRNGEILAEERGAVVVSNHQYTLDVLGMFNIWDVADRISAIAKKE 420
           KI + +T  M +++ELRN EIL +++  ++++NHQ  LDVLGM   W V D +  + K  
Sbjct: 61  KIFQAMTWPMGVRFELRNSEILHDKKPYIIIANHQSALDVLGMSFAWPV-DCV-VMLKSS 118

Query: 421 LFYVWPFGLSAYLAGVVFIDRYDPKEAYK 507
           L Y+  F L AYL   V+I+R+  ++A K
Sbjct: 119 LKYLPGFNLCAYLCDSVYINRFSKEKALK 147



 Score = 52.0 bits (119), Expect = 4e-07
 Identities = 24/42 (57%), Positives = 32/42 (76%)
 Frame = +2

Query: 527 EVMTKNKTKIWIFPEGTRNKNFTKFLPFKKGAFNIAVSAQVP 652
           E++TK K K+WI+PEGTRN    + LPFKKGAF +A  A++P
Sbjct: 155 EIVTK-KRKVWIYPEGTRNAE-PELLPFKKGAFILAKQAKIP 194


>Z81089-7|CAB03139.1|  262|Caenorhabditis elegans Hypothetical
           protein F59F4.4 protein.
          Length = 262

 Score = 66.5 bits (155), Expect = 2e-11
 Identities = 36/89 (40%), Positives = 56/89 (62%)
 Frame = +1

Query: 241 KILKHVTKIMNLKWELRNGEILAEERGAVVVSNHQYTLDVLGMFNIWDVADRISAIAKKE 420
           KI + +T  M +++ELRN EIL +++  ++++NHQ  LDVLGM   W V D +  + K  
Sbjct: 61  KIFQAMTWPMGVRFELRNSEILHDKKPYIIIANHQSALDVLGMSFAWPV-DCV-VMLKSS 118

Query: 421 LFYVWPFGLSAYLAGVVFIDRYDPKEAYK 507
           L Y+  F L AYL   V+I+R+  ++A K
Sbjct: 119 LKYLPGFNLCAYLCDSVYINRFSKEKALK 147



 Score = 52.0 bits (119), Expect = 4e-07
 Identities = 24/42 (57%), Positives = 32/42 (76%)
 Frame = +2

Query: 527 EVMTKNKTKIWIFPEGTRNKNFTKFLPFKKGAFNIAVSAQVP 652
           E++TK K K+WI+PEGTRN    + LPFKKGAF +A  A++P
Sbjct: 155 EIVTK-KRKVWIYPEGTRNAE-PELLPFKKGAFILAKQAKIP 194


>Z73975-1|CAA98276.1|  282|Caenorhabditis elegans Hypothetical
           protein T06E8.1 protein.
          Length = 282

 Score = 58.8 bits (136), Expect = 3e-09
 Identities = 27/43 (62%), Positives = 34/43 (79%)
 Frame = +2

Query: 524 SEVMTKNKTKIWIFPEGTRNKNFTKFLPFKKGAFNIAVSAQVP 652
           SE+  +N  K+W+FPEGTRN+    F+PFKKGAFNIAV AQ+P
Sbjct: 158 SEMKNRN-LKLWVFPEGTRNRE-GGFIPFKKGAFNIAVRAQIP 198



 Score = 51.2 bits (117), Expect = 6e-07
 Identities = 27/63 (42%), Positives = 37/63 (58%)
 Frame = +1

Query: 313 ERGAVVVSNHQYTLDVLGMFNIWDVADRISAIAKKELFYVWPFGLSAYLAGVVFIDRYDP 492
           E  AVV+ NHQ +LD+L M +IW        + K+ L YV  F L AY +  +FIDRY+ 
Sbjct: 89  EGPAVVICNHQSSLDILSMASIW--PKNCVVMMKRILAYVPFFNLGAYFSNTIFIDRYNR 146

Query: 493 KEA 501
           + A
Sbjct: 147 ERA 149


>Z49207-8|CAJ85773.1|  455|Caenorhabditis elegans Hypothetical
           protein R07E3.5b protein.
          Length = 455

 Score = 32.7 bits (71), Expect = 0.23
 Identities = 18/34 (52%), Positives = 21/34 (61%)
 Frame = +2

Query: 530 VMTKNKTKIWIFPEGTRNKNFTKFLPFKKGAFNI 631
           V  +NK  I IFPEGT   N T  + FKKG+F I
Sbjct: 248 VNDENKLPIIIFPEGTCINN-TSVMMFKKGSFEI 280


>Z49207-7|CAA89072.1|  512|Caenorhabditis elegans Hypothetical
           protein R07E3.5a protein.
          Length = 512

 Score = 32.7 bits (71), Expect = 0.23
 Identities = 18/34 (52%), Positives = 21/34 (61%)
 Frame = +2

Query: 530 VMTKNKTKIWIFPEGTRNKNFTKFLPFKKGAFNI 631
           V  +NK  I IFPEGT   N T  + FKKG+F I
Sbjct: 305 VNDENKLPIIIFPEGTCINN-TSVMMFKKGSFEI 337


>AC006642-3|AAF39832.2|  410|Caenorhabditis elegans
           Acyltransferase-like protein 4,isoform b protein.
          Length = 410

 Score = 30.7 bits (66), Expect = 0.94
 Identities = 16/33 (48%), Positives = 20/33 (60%)
 Frame = +2

Query: 542 NKTKIWIFPEGTRNKNFTKFLPFKKGAFNIAVS 640
           +K  I IFPEGT   N T  + FKKG+F I  +
Sbjct: 192 DKLPILIFPEGTCINN-TSVMMFKKGSFEIGTT 223


>AC006642-2|AAF39831.1|  617|Caenorhabditis elegans
           Acyltransferase-like protein 4,isoform a protein.
          Length = 617

 Score = 30.7 bits (66), Expect = 0.94
 Identities = 16/33 (48%), Positives = 20/33 (60%)
 Frame = +2

Query: 542 NKTKIWIFPEGTRNKNFTKFLPFKKGAFNIAVS 640
           +K  I IFPEGT   N T  + FKKG+F I  +
Sbjct: 402 DKLPILIFPEGTCINN-TSVMMFKKGSFEIGTT 433


>Z81050-8|CAB02859.1|  371|Caenorhabditis elegans Hypothetical
           protein C50B6.10 protein.
          Length = 371

 Score = 29.9 bits (64), Expect = 1.6
 Identities = 14/43 (32%), Positives = 26/43 (60%)
 Frame = -2

Query: 594 VKFLFLVPSGNIQIFVLFFVITSEVTLKLFISFLGIVSVYKDY 466
           V F+FL+P  ++Q+ +   V+   ++L  FI  L ++S+  DY
Sbjct: 265 VMFMFLIPFFDLQLGIPTGVLLCALSLYPFIDGLIVISIVSDY 307


>Z74472-7|CAA98944.1|  182|Caenorhabditis elegans Hypothetical
           protein F23H12.7 protein.
          Length = 182

 Score = 28.3 bits (60), Expect = 5.0
 Identities = 12/40 (30%), Positives = 23/40 (57%)
 Frame = -2

Query: 555 IFVLFFVITSEVTLKLFISFLGIVSVYKDYSGQIGRKTKW 436
           + +L F++ +E   K+ I F+G + ++K Y    GR+  W
Sbjct: 116 VVLLAFIVLNEQIDKVMIMFMGGMVLFKIYEILTGRRLYW 155


>U41029-3|AAF99952.2|  886|Caenorhabditis elegans Hypothetical
           protein F47G3.1 protein.
          Length = 886

 Score = 27.9 bits (59), Expect = 6.6
 Identities = 13/36 (36%), Positives = 22/36 (61%)
 Frame = +1

Query: 313 ERGAVVVSNHQYTLDVLGMFNIWDVADRISAIAKKE 420
           E  AVVV  ++  + + G+FN ++++D  SAI   E
Sbjct: 404 ENAAVVVGKNEKAVTMTGVFNWFNISDMKSAIIDLE 439


>U13019-2|AAM15600.1|  192|Caenorhabditis elegans Homolog of
           odr-2(two) protein 4,isoform a protein.
          Length = 192

 Score = 27.5 bits (58), Expect = 8.7
 Identities = 8/19 (42%), Positives = 13/19 (68%)
 Frame = +2

Query: 410 PKKNCFTFGHLVFLPIWPE 466
           PK +CF+    V+LP+W +
Sbjct: 36  PKSHCFSCASFVYLPLWSQ 54


>U13019-1|AAM15601.1|  196|Caenorhabditis elegans Homolog of
           odr-2(two) protein 4,isoform b protein.
          Length = 196

 Score = 27.5 bits (58), Expect = 8.7
 Identities = 8/19 (42%), Positives = 13/19 (68%)
 Frame = +2

Query: 410 PKKNCFTFGHLVFLPIWPE 466
           PK +CF+    V+LP+W +
Sbjct: 36  PKSHCFSCASFVYLPLWSQ 54


>AL110482-9|CAB60340.3|  372|Caenorhabditis elegans Hypothetical
           protein Y39G8B.4 protein.
          Length = 372

 Score = 27.5 bits (58), Expect = 8.7
 Identities = 12/28 (42%), Positives = 16/28 (57%)
 Frame = +3

Query: 129 YHFYFISFYVSXLYVGIGDVAAFPVQPK 212
           YHF  ++++   L VG G V   PVQ K
Sbjct: 320 YHFLSVTYFWEKLKVGHGAVDMMPVQKK 347


>AF016445-1|AAC69057.2|  367|Caenorhabditis elegans Serpentine
           receptor, class w protein132 protein.
          Length = 367

 Score = 27.5 bits (58), Expect = 8.7
 Identities = 12/44 (27%), Positives = 25/44 (56%)
 Frame = -3

Query: 284 SHFKFIIFVTCFSIFAAHLVFLTFFGLNRKSGHITNANIQXRDI 153
           +++++I+ + CF I  AH++ LT   +   S ++  A +   DI
Sbjct: 38  TNYEYIVSIICFLINIAHIIILTRKPMRTSSINLIMAAVAAFDI 81


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,845,917
Number of Sequences: 27780
Number of extensions: 315243
Number of successful extensions: 890
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 855
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 886
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1444744186
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)