Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fe100P05_F_G22
         (652 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB183889-1|BAD86829.1|  316|Apis mellifera Mos protein.                24   1.1  
DQ244075-1|ABB36785.1|  548|Apis mellifera cytochrome P450 monoo...    23   1.9  
DQ667187-1|ABG75739.1|  428|Apis mellifera histamine-gated chlor...    22   5.9  
AY569719-1|AAS86672.1|  401|Apis mellifera feminizer protein.          22   5.9  
AY569718-1|AAS86671.1|  401|Apis mellifera feminizer protein.          22   5.9  
AY569715-1|AAS86668.1|  401|Apis mellifera feminizer protein.          22   5.9  
AY569713-1|AAS86666.1|  401|Apis mellifera feminizer protein.          22   5.9  
AY569711-1|AAS86664.1|  401|Apis mellifera feminizer protein.          22   5.9  
AY569702-1|AAS86655.1|  400|Apis mellifera feminizer protein.          22   5.9  
AY350616-1|AAQ57658.1|  401|Apis mellifera complementary sex det...    22   5.9  
AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein.              21   7.8  

>AB183889-1|BAD86829.1|  316|Apis mellifera Mos protein.
          Length = 316

 Score = 24.2 bits (50), Expect = 1.1
 Identities = 14/36 (38%), Positives = 19/36 (52%)
 Frame = +2

Query: 491 PRKLINSFXVTSEVMTKNKTKIWIFPEGTRNKNFTK 598
           P+KL N F   S  + KN  +I++ P  T  KN  K
Sbjct: 4   PQKLANKFYRISPQILKNDKRIYLSPR-TPIKNVYK 38


>DQ244075-1|ABB36785.1|  548|Apis mellifera cytochrome P450
           monooxygenase protein.
          Length = 548

 Score = 23.4 bits (48), Expect = 1.9
 Identities = 8/18 (44%), Positives = 12/18 (66%)
 Frame = +2

Query: 566 PEGTRNKNFTKFLPFKKG 619
           PE T N+++  F+PF  G
Sbjct: 467 PEKTANRHYYAFVPFSAG 484


>DQ667187-1|ABG75739.1|  428|Apis mellifera histamine-gated chloride
           channel protein.
          Length = 428

 Score = 21.8 bits (44), Expect = 5.9
 Identities = 9/30 (30%), Positives = 14/30 (46%)
 Frame = +1

Query: 196 FLFSPKNVRNTKWAAKILKHVTKIMNLKWE 285
           FL  P + +  K   + L H T  M  +W+
Sbjct: 167 FLIYPHDTQECKLQMESLSHTTDEMIFQWD 196


>AY569719-1|AAS86672.1|  401|Apis mellifera feminizer protein.
          Length = 401

 Score = 21.8 bits (44), Expect = 5.9
 Identities = 6/20 (30%), Positives = 14/20 (70%)
 Frame = +3

Query: 204 QPKKCKEYQVGSENTKTRNK 263
           + K CK+Y + S + ++R++
Sbjct: 203 ETKTCKKYAISSNSLRSRSR 222


>AY569718-1|AAS86671.1|  401|Apis mellifera feminizer protein.
          Length = 401

 Score = 21.8 bits (44), Expect = 5.9
 Identities = 6/20 (30%), Positives = 14/20 (70%)
 Frame = +3

Query: 204 QPKKCKEYQVGSENTKTRNK 263
           + K CK+Y + S + ++R++
Sbjct: 203 ETKTCKKYAISSNSLRSRSR 222


>AY569715-1|AAS86668.1|  401|Apis mellifera feminizer protein.
          Length = 401

 Score = 21.8 bits (44), Expect = 5.9
 Identities = 6/20 (30%), Positives = 14/20 (70%)
 Frame = +3

Query: 204 QPKKCKEYQVGSENTKTRNK 263
           + K CK+Y + S + ++R++
Sbjct: 203 ETKTCKKYAISSNSLRSRSR 222


>AY569713-1|AAS86666.1|  401|Apis mellifera feminizer protein.
          Length = 401

 Score = 21.8 bits (44), Expect = 5.9
 Identities = 6/20 (30%), Positives = 14/20 (70%)
 Frame = +3

Query: 204 QPKKCKEYQVGSENTKTRNK 263
           + K CK+Y + S + ++R++
Sbjct: 203 ETKTCKKYAISSNSLRSRSR 222


>AY569711-1|AAS86664.1|  401|Apis mellifera feminizer protein.
          Length = 401

 Score = 21.8 bits (44), Expect = 5.9
 Identities = 6/20 (30%), Positives = 14/20 (70%)
 Frame = +3

Query: 204 QPKKCKEYQVGSENTKTRNK 263
           + K CK+Y + S + ++R++
Sbjct: 203 ETKTCKKYAISSNSLRSRSR 222


>AY569702-1|AAS86655.1|  400|Apis mellifera feminizer protein.
          Length = 400

 Score = 21.8 bits (44), Expect = 5.9
 Identities = 6/20 (30%), Positives = 14/20 (70%)
 Frame = +3

Query: 204 QPKKCKEYQVGSENTKTRNK 263
           + K CK+Y + S + ++R++
Sbjct: 203 ETKTCKKYAISSNSLRSRSR 222


>AY350616-1|AAQ57658.1|  401|Apis mellifera complementary sex
           determiner protein.
          Length = 401

 Score = 21.8 bits (44), Expect = 5.9
 Identities = 6/20 (30%), Positives = 14/20 (70%)
 Frame = +3

Query: 204 QPKKCKEYQVGSENTKTRNK 263
           + K CK+Y + S + ++R++
Sbjct: 203 ETKTCKKYAISSNSLRSRSR 222


>AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein.
          Length = 1946

 Score = 21.4 bits (43), Expect = 7.8
 Identities = 10/28 (35%), Positives = 12/28 (42%)
 Frame = +1

Query: 340  HQYTLDVLGMFNIWDVADRISAIAKKEL 423
            H YT+     F  WD A   S + K  L
Sbjct: 1397 HGYTIHYKPEFGDWDTAQISSTVQKYTL 1424


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 177,440
Number of Sequences: 438
Number of extensions: 4217
Number of successful extensions: 11
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 19682733
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)