Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fe100P05_F_G19
         (510 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z71181-10|CAA94901.2|  678|Caenorhabditis elegans Hypothetical p...   112   2e-25
Z71177-11|CAA94873.2|  678|Caenorhabditis elegans Hypothetical p...   112   2e-25
U28928-11|AAA68342.3|  824|Caenorhabditis elegans Hypothetical p...    31   0.49 
U23515-13|AAK21453.1|  823|Caenorhabditis elegans Hypothetical p...    30   1.1  

>Z71181-10|CAA94901.2|  678|Caenorhabditis elegans Hypothetical
           protein K07C5.8 protein.
          Length = 678

 Score =  112 bits (269), Expect = 2e-25
 Identities = 51/80 (63%), Positives = 65/80 (81%)
 Frame = +1

Query: 271 NNKQNEEPSQSVQYSIPGILHFIQHEWARFELERSQWEVDKAEFEARIAFLQGXRXGQEN 450
           N+K  +E ++  QY++ GILHFIQHEW + EL+R++WE ++AE +ARIAFLQG R GQEN
Sbjct: 12  NDKAKDETTRP-QYTMSGILHFIQHEWTKNELDRTRWEAERAEMQARIAFLQGERKGQEN 70

Query: 451 LKNDLVRRIXMLEYALKQER 510
           LK DLVRRI MLE+ LKQER
Sbjct: 71  LKQDLVRRIKMLEFCLKQER 90


>Z71177-11|CAA94873.2|  678|Caenorhabditis elegans Hypothetical
           protein K07C5.8 protein.
          Length = 678

 Score =  112 bits (269), Expect = 2e-25
 Identities = 51/80 (63%), Positives = 65/80 (81%)
 Frame = +1

Query: 271 NNKQNEEPSQSVQYSIPGILHFIQHEWARFELERSQWEVDKAEFEARIAFLQGXRXGQEN 450
           N+K  +E ++  QY++ GILHFIQHEW + EL+R++WE ++AE +ARIAFLQG R GQEN
Sbjct: 12  NDKAKDETTRP-QYTMSGILHFIQHEWTKNELDRTRWEAERAEMQARIAFLQGERKGQEN 70

Query: 451 LKNDLVRRIXMLEYALKQER 510
           LK DLVRRI MLE+ LKQER
Sbjct: 71  LKQDLVRRIKMLEFCLKQER 90


>U28928-11|AAA68342.3|  824|Caenorhabditis elegans Hypothetical
           protein C44B7.11 protein.
          Length = 824

 Score = 31.1 bits (67), Expect = 0.49
 Identities = 16/43 (37%), Positives = 25/43 (58%), Gaps = 3/43 (6%)
 Frame = +2

Query: 203 PWMITPYLITTEGKW---DLKLESV*IINKMKNPVKVFSIQYR 322
           PW  TP+L  T+G+    ++++ SV    K K+PVK+  I  R
Sbjct: 645 PWCETPFLFPTKGRLNERNIRVRSVDERLKFKHPVKILGISKR 687


>U23515-13|AAK21453.1|  823|Caenorhabditis elegans Hypothetical
           protein R144.2a protein.
          Length = 823

 Score = 29.9 bits (64), Expect = 1.1
 Identities = 13/28 (46%), Positives = 17/28 (60%), Gaps = 1/28 (3%)
 Frame = +2

Query: 335 LSNTNGRDSNWRDHNGRWTKQNL-RHGS 415
           L ++ G+   W+DH     KQNL RHGS
Sbjct: 683 LDDSQGKSKEWQDHMDWHVKQNLARHGS 710


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,501,114
Number of Sequences: 27780
Number of extensions: 227896
Number of successful extensions: 577
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 573
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 577
length of database: 12,740,198
effective HSP length: 76
effective length of database: 10,628,918
effective search space used: 988489374
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)