Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fe100P05_F_G09
(460 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
02_04_0473 + 23197294-23197340,23197443-23197680,23197792-231980... 31 0.59
08_01_0194 - 1603702-1603782,1603970-1604062,1604203-1604328,160... 29 1.8
05_04_0450 - 21356877-21356942,21357482-21358095,21358173-213585... 28 3.1
03_01_0207 - 1633177-1633372,1633623-1633688,1633778-1633859,163... 28 3.1
01_06_1455 + 37504175-37504231,37504357-37504750,37504865-375054... 28 3.1
12_01_0409 - 3230853-3230918,3231372-3231994,3232454-3232847,323... 27 5.5
11_01_0403 + 3059650-3059709,3059807-3060200,3060275-3060930,306... 27 5.5
10_08_0597 + 19089616-19089675,19089789-19090182,19090451-190910... 27 5.5
08_02_0441 - 17196352-17196536,17196780-17196906,17198018-171981... 27 5.5
05_01_0047 - 323097-323162,323287-323900,324233-324626,324718-32... 27 5.5
03_06_0585 - 34912159-34912224,34912634-34913247,34913350-349137... 27 5.5
03_05_0926 + 28871800-28871859,28871943-28872336,28872586-288731... 27 5.5
02_05_0258 + 27222058-27223198,27223297-27223460,27224399-272245... 27 5.5
01_07_0285 - 42476767-42476832,42476990-42477603,42477821-424782... 27 5.5
12_02_1282 + 27528159-27529148,27529549-27529614 27 7.3
06_03_0854 + 25400855-25403741,25406174-25407708 27 7.3
>02_04_0473 +
23197294-23197340,23197443-23197680,23197792-23198016,
23198616-23198762,23198827-23198961,23199415-23199507,
23199925-23200044,23200303-23200413,23200486-23200611,
23200731-23200829,23201024-23201104
Length = 473
Score = 30.7 bits (66), Expect = 0.59
Identities = 14/27 (51%), Positives = 17/27 (62%)
Frame = +2
Query: 149 KQAVVLDLGSEYTKFGFTGEAAPRCII 229
+ AVV+D G+ YTK GF G P C I
Sbjct: 6 RPAVVIDNGTGYTKMGFAGNVEP-CFI 31
>08_01_0194 -
1603702-1603782,1603970-1604062,1604203-1604328,
1604403-1604513,1604989-1605108,1605665-1605757,
1606024-1606157,1606503-1606530,1606821-1607075,
1607167-1607401,1608147-1608193
Length = 440
Score = 29.1 bits (62), Expect = 1.8
Identities = 11/23 (47%), Positives = 17/23 (73%)
Frame = +2
Query: 149 KQAVVLDLGSEYTKFGFTGEAAP 217
+ AVV+D G+ Y+K GF+G + P
Sbjct: 6 RPAVVIDNGTGYSKLGFSGNSEP 28
>05_04_0450 -
21356877-21356942,21357482-21358095,21358173-21358566,
21358648-21358704
Length = 376
Score = 28.3 bits (60), Expect = 3.1
Identities = 12/31 (38%), Positives = 18/31 (58%)
Frame = +2
Query: 143 QEKQAVVLDLGSEYTKFGFTGEAAPRCIIRS 235
++ Q +V D G+ K GF G+ APR + S
Sbjct: 4 EDIQPIVCDNGTGMVKAGFAGDDAPRAVFPS 34
>03_01_0207 -
1633177-1633372,1633623-1633688,1633778-1633859,
1633942-1634037,1634413-1634518,1634602-1634661,
1635114-1635234,1635929-1636040,1636118-1636217,
1636328-1636382,1636489-1636595,1636798-1636850,
1636989-1637114,1637909-1638065,1638226-1638421,
1638917-1639073,1639139-1639379,1639475-1639605,
1639704-1639826,1639929-1639984,1640610-1640767,
1640847-1640984,1641070-1641123
Length = 896
Score = 28.3 bits (60), Expect = 3.1
Identities = 10/36 (27%), Positives = 19/36 (52%)
Frame = +2
Query: 212 APRCIIRSQFWCSTERRFKKVYEYSTPEELYDNLVN 319
A RC+ ++ ++CS + F + Y Y LY + +
Sbjct: 709 ATRCMTQAVYFCSGDLTFSEYYHYGLAASLYTHFTS 744
>01_06_1455 +
37504175-37504231,37504357-37504750,37504865-37505478,
37506021-37506086
Length = 376
Score = 28.3 bits (60), Expect = 3.1
Identities = 12/31 (38%), Positives = 18/31 (58%)
Frame = +2
Query: 143 QEKQAVVLDLGSEYTKFGFTGEAAPRCIIRS 235
++ Q +V D G+ K GF G+ APR + S
Sbjct: 4 EDIQPIVCDNGTGMVKAGFAGDDAPRAVFPS 34
>12_01_0409 -
3230853-3230918,3231372-3231994,3232454-3232847,
3233000-3233059
Length = 380
Score = 27.5 bits (58), Expect = 5.5
Identities = 12/31 (38%), Positives = 18/31 (58%)
Frame = +2
Query: 143 QEKQAVVLDLGSEYTKFGFTGEAAPRCIIRS 235
++ Q +V D G+ K GF G+ APR + S
Sbjct: 5 EDIQPLVCDNGTGMVKAGFAGDDAPRAVFPS 35
>11_01_0403 +
3059650-3059709,3059807-3060200,3060275-3060930,
3060979-3061044
Length = 391
Score = 27.5 bits (58), Expect = 5.5
Identities = 12/31 (38%), Positives = 18/31 (58%)
Frame = +2
Query: 143 QEKQAVVLDLGSEYTKFGFTGEAAPRCIIRS 235
++ Q +V D G+ K GF G+ APR + S
Sbjct: 5 EDIQPLVCDNGTGMVKAGFAGDDAPRAVFPS 35
>10_08_0597 +
19089616-19089675,19089789-19090182,19090451-19091064,
19091160-19091225
Length = 377
Score = 27.5 bits (58), Expect = 5.5
Identities = 12/31 (38%), Positives = 18/31 (58%)
Frame = +2
Query: 143 QEKQAVVLDLGSEYTKFGFTGEAAPRCIIRS 235
++ Q +V D G+ K GF G+ APR + S
Sbjct: 5 EDIQPLVCDNGTGMVKAGFAGDDAPRAVFPS 35
>08_02_0441 -
17196352-17196536,17196780-17196906,17198018-17198101,
17198282-17198348,17198575-17198633,17199211-17199336,
17199406-17199474,17199545-17199653,17199692-17199760,
17199876-17199979,17200518-17200567,17200696-17200774,
17200867-17200938,17201083-17201217,17201311-17201421,
17202088-17202129
Length = 495
Score = 27.5 bits (58), Expect = 5.5
Identities = 20/53 (37%), Positives = 24/53 (45%)
Frame = +2
Query: 158 VVLDLGSEYTKFGFTGEAAPRCIIRSQFWCSTERRFKKVYEYSTPEELYDNLV 316
VV D G+ Y K GF GE P S F C R + E +EL D +V
Sbjct: 7 VVCDNGTGYVKCGFAGENFP----TSVFPCVVGRPLLRYEESLQEQELTDIVV 55
>05_01_0047 -
323097-323162,323287-323900,324233-324626,324718-324777
Length = 377
Score = 27.5 bits (58), Expect = 5.5
Identities = 12/31 (38%), Positives = 18/31 (58%)
Frame = +2
Query: 143 QEKQAVVLDLGSEYTKFGFTGEAAPRCIIRS 235
++ Q +V D G+ K GF G+ APR + S
Sbjct: 5 EDIQPLVCDNGTGMVKAGFAGDDAPRAVFPS 35
>03_06_0585 -
34912159-34912224,34912634-34913247,34913350-34913734,
34913824-34913883
Length = 374
Score = 27.5 bits (58), Expect = 5.5
Identities = 12/31 (38%), Positives = 18/31 (58%)
Frame = +2
Query: 143 QEKQAVVLDLGSEYTKFGFTGEAAPRCIIRS 235
++ Q +V D G+ K GF G+ APR + S
Sbjct: 5 EDIQPLVCDNGTGMVKAGFAGDDAPRAVFPS 35
>03_05_0926 +
28871800-28871859,28871943-28872336,28872586-28873199,
28873281-28873346
Length = 377
Score = 27.5 bits (58), Expect = 5.5
Identities = 12/31 (38%), Positives = 18/31 (58%)
Frame = +2
Query: 143 QEKQAVVLDLGSEYTKFGFTGEAAPRCIIRS 235
++ Q +V D G+ K GF G+ APR + S
Sbjct: 5 EDIQPLVCDNGTGMVKAGFAGDDAPRAVFPS 35
>02_05_0258 +
27222058-27223198,27223297-27223460,27224399-27224575,
27224713-27224761,27224991-27225793
Length = 777
Score = 27.5 bits (58), Expect = 5.5
Identities = 14/35 (40%), Positives = 20/35 (57%)
Frame = +2
Query: 125 EGIALIQEKQAVVLDLGSEYTKFGFTGEAAPRCII 229
EGI ++E AVV ++ SEY+ G G + R I
Sbjct: 255 EGIPELEEDDAVVKEVSSEYSAHGSGGARSRRSSI 289
>01_07_0285 -
42476767-42476832,42476990-42477603,42477821-42478214,
42478301-42478360
Length = 377
Score = 27.5 bits (58), Expect = 5.5
Identities = 12/31 (38%), Positives = 18/31 (58%)
Frame = +2
Query: 143 QEKQAVVLDLGSEYTKFGFTGEAAPRCIIRS 235
++ Q +V D G+ K GF G+ APR + S
Sbjct: 5 EDIQPLVCDNGTGMVKAGFAGDDAPRAVFPS 35
>12_02_1282 + 27528159-27529148,27529549-27529614
Length = 351
Score = 27.1 bits (57), Expect = 7.3
Identities = 12/28 (42%), Positives = 16/28 (57%)
Frame = +2
Query: 152 QAVVLDLGSEYTKFGFTGEAAPRCIIRS 235
Q +V D G+ K GF G+ APR + S
Sbjct: 8 QPLVCDNGTGMVKAGFAGDDAPRAVFPS 35
>06_03_0854 + 25400855-25403741,25406174-25407708
Length = 1473
Score = 27.1 bits (57), Expect = 7.3
Identities = 14/39 (35%), Positives = 20/39 (51%)
Frame = -2
Query: 210 ASPVKPNLVYSLPKSSTTACFSCIRAIPSYKAIFYLSIP 94
A PV+PN V S P S+ ++ PS A+ L+ P
Sbjct: 1030 APPVEPNAVISPPSSALAPAYAVPAPAPSLAALEALAPP 1068
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,826,811
Number of Sequences: 37544
Number of extensions: 196762
Number of successful extensions: 474
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 468
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 474
length of database: 14,793,348
effective HSP length: 76
effective length of database: 11,940,004
effective search space used: 907440304
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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