Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fe100P05_F_G09
         (460 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U02964-1|AAA03444.1|  376|Anopheles gambiae actin 1D protein.          30   0.034
U02933-1|AAA56882.1|  376|Anopheles gambiae actin 1D protein.          30   0.034
U02930-1|AAA56881.1|  376|Anopheles gambiae actin 1D protein.          30   0.034
CR954256-1|CAJ14142.1|  376|Anopheles gambiae actin protein.           29   0.10 
AF513635-1|AAM53607.1|  212|Anopheles gambiae glutathione S-tran...    27   0.42 
AB090820-2|BAC57916.1| 1222|Anopheles gambiae reverse transcript...    23   3.9  
AJ535208-1|CAD59408.1| 1133|Anopheles gambiae SMC6 protein protein.    23   5.1  
M93691-2|AAA29365.1| 1222|Anopheles gambiae protein ( Anopheles ...    22   9.0  

>U02964-1|AAA03444.1|  376|Anopheles gambiae actin 1D protein.
          Length = 376

 Score = 30.3 bits (65), Expect = 0.034
 Identities = 14/31 (45%), Positives = 19/31 (61%)
 Frame = +2

Query: 143 QEKQAVVLDLGSEYTKFGFTGEAAPRCIIRS 235
           +E  A+V+D GS   K GF G+ APR +  S
Sbjct: 4   EEVAALVVDNGSGMCKAGFAGDDAPRAVFPS 34


>U02933-1|AAA56882.1|  376|Anopheles gambiae actin 1D protein.
          Length = 376

 Score = 30.3 bits (65), Expect = 0.034
 Identities = 14/31 (45%), Positives = 19/31 (61%)
 Frame = +2

Query: 143 QEKQAVVLDLGSEYTKFGFTGEAAPRCIIRS 235
           +E  A+V+D GS   K GF G+ APR +  S
Sbjct: 4   EEVAALVVDNGSGMCKAGFAGDDAPRAVFPS 34


>U02930-1|AAA56881.1|  376|Anopheles gambiae actin 1D protein.
          Length = 376

 Score = 30.3 bits (65), Expect = 0.034
 Identities = 14/31 (45%), Positives = 19/31 (61%)
 Frame = +2

Query: 143 QEKQAVVLDLGSEYTKFGFTGEAAPRCIIRS 235
           +E  A+V+D GS   K GF G+ APR +  S
Sbjct: 4   EEVAALVVDNGSGMCKAGFAGDDAPRAVFPS 34


>CR954256-1|CAJ14142.1|  376|Anopheles gambiae actin protein.
          Length = 376

 Score = 28.7 bits (61), Expect = 0.10
 Identities = 13/27 (48%), Positives = 17/27 (62%)
 Frame = +2

Query: 155 AVVLDLGSEYTKFGFTGEAAPRCIIRS 235
           A+V+D GS   K GF G+ APR +  S
Sbjct: 8   ALVVDNGSGMCKAGFAGDDAPRAVFPS 34


>AF513635-1|AAM53607.1|  212|Anopheles gambiae glutathione
           S-transferase D4 protein.
          Length = 212

 Score = 26.6 bits (56), Expect = 0.42
 Identities = 15/56 (26%), Positives = 27/56 (48%), Gaps = 2/56 (3%)
 Frame = +2

Query: 119 LYEGIALIQEKQAVVLDLGSEYTKFG--FTGEAAPRCIIRSQFWCSTERRFKKVYE 280
           L +   ++ E  A+VL L   Y K    +  +A  RC++  + +      FK++YE
Sbjct: 54  LVDNGTVVFEPCAIVLYLVEMYAKNDALYPKDALVRCVVNQRLFFDVSTLFKQIYE 109


>AB090820-2|BAC57916.1| 1222|Anopheles gambiae reverse transcriptase
           protein.
          Length = 1222

 Score = 23.4 bits (48), Expect = 3.9
 Identities = 13/34 (38%), Positives = 17/34 (50%)
 Frame = +2

Query: 128 GIALIQEKQAVVLDLGSEYTKFGFTGEAAPRCII 229
           G + +Q  Q VV D GS    FG T     RC++
Sbjct: 539 GRSTVQAIQLVV-DAGSHAMSFGRTNNRDKRCLL 571


>AJ535208-1|CAD59408.1| 1133|Anopheles gambiae SMC6 protein protein.
          Length = 1133

 Score = 23.0 bits (47), Expect = 5.1
 Identities = 7/17 (41%), Positives = 13/17 (76%)
 Frame = +3

Query: 168 IWAVNIPSLVLLVKQLH 218
           ++  N+P+LV  ++QLH
Sbjct: 517 VYGTNMPALVARIRQLH 533


>M93691-2|AAA29365.1| 1222|Anopheles gambiae protein ( Anopheles
            gambiae RT2 retroposon. ).
          Length = 1222

 Score = 22.2 bits (45), Expect = 9.0
 Identities = 10/33 (30%), Positives = 15/33 (45%)
 Frame = -2

Query: 234  DLIIHRGAASPVKPNLVYSLPKSSTTACFSCIR 136
            D + H G  S     L   +P+++  A F C R
Sbjct: 991  DYLCHNGFTSSPDCQLCVGVPETADDAFFECPR 1023


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 449,232
Number of Sequences: 2352
Number of extensions: 7913
Number of successful extensions: 72
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 70
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 72
length of database: 563,979
effective HSP length: 59
effective length of database: 425,211
effective search space used: 39544623
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)