Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fe100P05_F_G05
         (584 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AL132904-9|CAC35842.1|  113|Caenorhabditis elegans Hypothetical ...   113   9e-26
U32305-4|AAK18861.1|  139|Caenorhabditis elegans Hypothetical pr...   107   8e-24
Z81124-4|CAB03372.1|  341|Caenorhabditis elegans Hypothetical pr...    30   1.1  
AC006673-6|AAF39926.2|  335|Caenorhabditis elegans Serpentine re...    29   3.2  
U97196-1|AAK68667.2| 3279|Caenorhabditis elegans Hypothetical pr...    28   5.6  
Z93384-4|CAE17903.1|  308|Caenorhabditis elegans Hypothetical pr...    27   9.8  
AL021492-15|CAE18000.1|  308|Caenorhabditis elegans Hypothetical...    27   9.8  

>AL132904-9|CAC35842.1|  113|Caenorhabditis elegans Hypothetical
           protein Y111B2A.13 protein.
          Length = 113

 Score =  113 bits (272), Expect = 9e-26
 Identities = 47/101 (46%), Positives = 74/101 (73%)
 Frame = +2

Query: 128 SYQLYRNTTIGNTLQESLDELIQYGQITPALAVKVLLQFDKSINQALSNRVKSRLTFKAG 307
           +YQLYRNTT+G  LQ++LD+ +    I  +L+ K++  FDKSIN+ L ++ K+++ F+A 
Sbjct: 5   NYQLYRNTTLGQALQKTLDDFVGDQMIPDSLSKKIMDSFDKSINKILPHKAKNKVNFRAD 64

Query: 308 KLNTYRFCDNVWTFMLNDVEFREVQELAKVEKVKIVACDGK 430
           KL  YR+CDNVWTF++  ++ R+  E   V+++KIVACDG+
Sbjct: 65  KLRAYRYCDNVWTFIVEQIDLRDAVEGGTVDRLKIVACDGQ 105


>U32305-4|AAK18861.1|  139|Caenorhabditis elegans Hypothetical
           protein B0336.13 protein.
          Length = 139

 Score =  107 bits (256), Expect = 8e-24
 Identities = 49/103 (47%), Positives = 73/103 (70%), Gaps = 2/103 (1%)
 Frame = +2

Query: 128 SYQLYRNTTIGNTLQESLDELIQYGQITPALAVKVLLQFDKSINQALSNRVKSRLTFKAG 307
           SY LYR TT+G  L ++L+++   G +T +LA KVL QFDKS+N+ +S   K ++ F A 
Sbjct: 3   SYALYRGTTLGQALDKTLEDMESEGLLTKSLASKVLQQFDKSMNKQISRLPKEKMNFCAT 62

Query: 308 KLNTYRFCDNVWTFMLNDVEFREVQEL--AKVEKVKIVACDGK 430
           +L TYR+CDNVWTF+LN+V  ++ Q      ++K+K+VACDG+
Sbjct: 63  QLLTYRYCDNVWTFILNNVTLKDPQRSFDEPIDKLKVVACDGR 105


>Z81124-4|CAB03372.1|  341|Caenorhabditis elegans Hypothetical
           protein T21B4.6 protein.
          Length = 341

 Score = 30.3 bits (65), Expect = 1.1
 Identities = 18/78 (23%), Positives = 41/78 (52%), Gaps = 3/78 (3%)
 Frame = +2

Query: 206 ITPALAVKVLLQFDKSINQALSNRVKSRLTFKAGKLNTYRFCDNVWTFML-NDVEFREV- 379
           +T  +++ ++LQF+   +  L N+ +     K  +  TY F  N + FM+ + + F  + 
Sbjct: 117 LTGVISISIVLQFENRSSLILRNKFR----IKGTRYRTYWFLANFFAFMIFSVINFLNIP 172

Query: 380 -QELAKVEKVKIVACDGK 430
             + A+++ ++I+ C  K
Sbjct: 173 DPDQARIDILEILPCPTK 190


>AC006673-6|AAF39926.2|  335|Caenorhabditis elegans Serpentine
           receptor, class h protein7 protein.
          Length = 335

 Score = 28.7 bits (61), Expect = 3.2
 Identities = 14/47 (29%), Positives = 24/47 (51%)
 Frame = +2

Query: 281 KSRLTFKAGKLNTYRFCDNVWTFMLNDVEFREVQELAKVEKVKIVAC 421
           K ++  + G+  TY +CDN + F  +   FR   ++A V  V   +C
Sbjct: 165 KLKMEQRFGQFETYMWCDNCFFFNFDSNLFRWFFDIAAVSVVLGASC 211


>U97196-1|AAK68667.2| 3279|Caenorhabditis elegans Hypothetical protein
            B0207.5 protein.
          Length = 3279

 Score = 27.9 bits (59), Expect = 5.6
 Identities = 14/38 (36%), Positives = 21/38 (55%)
 Frame = +2

Query: 329  CDNVWTFMLNDVEFREVQELAKVEKVKIVACDGKNVDD 442
            CD+V T  L+D E+R  ++  +V+K     C   NV D
Sbjct: 917  CDDVDTNNLSDEEYRMYKKRCQVKKTPKDNCSNVNVKD 954


>Z93384-4|CAE17903.1|  308|Caenorhabditis elegans Hypothetical
           protein Y45F10D.15 protein.
          Length = 308

 Score = 27.1 bits (57), Expect = 9.8
 Identities = 14/39 (35%), Positives = 21/39 (53%)
 Frame = -2

Query: 460 SYRLSAVVNIFTITCYYFNFFHLGQFLYFSKFNIIQHKS 344
           SY L   + I T   Y+FN  HL    YF++  + +H+S
Sbjct: 84  SYLLCIFLRIETTLQYFFNLAHLLLVTYFAR-QVSKHRS 121


>AL021492-15|CAE18000.1|  308|Caenorhabditis elegans Hypothetical
           protein Y45F10D.15 protein.
          Length = 308

 Score = 27.1 bits (57), Expect = 9.8
 Identities = 14/39 (35%), Positives = 21/39 (53%)
 Frame = -2

Query: 460 SYRLSAVVNIFTITCYYFNFFHLGQFLYFSKFNIIQHKS 344
           SY L   + I T   Y+FN  HL    YF++  + +H+S
Sbjct: 84  SYLLCIFLRIETTLQYFFNLAHLLLVTYFAR-QVSKHRS 121


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,367,444
Number of Sequences: 27780
Number of extensions: 209817
Number of successful extensions: 533
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 514
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 532
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1226509528
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)