Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fe100P05_F_G02
(654 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPBC32H8.12c |act1|cps8|actin |Schizosaccharomyces pombe|chr 2||... 330 1e-91
SPBC1347.12 |||actin-like protein Arp1 |Schizosaccharomyces pomb... 191 7e-50
SPAC11H11.06 |arp2|SPAC22F8.01|ARP2/3 actin-organizing complex s... 170 2e-43
SPAC630.03 |arp3|act2|actin-like protein Arp3|Schizosaccharomyce... 130 2e-31
SPBC365.10 |||actin-like protein Arp5 |Schizosaccharomyces pombe... 97 2e-21
SPBP23A10.08 |alp5|arp4|actin-like protein Arp4|Schizosaccharomy... 94 2e-20
SPAC23D3.09 |arp42|arp4|SWI/SNF and RSC complex subunit Arp42|Sc... 86 5e-18
SPAC1071.06 |arp9||SWI/SNF and RSC complex subunit Arp9|Schizosa... 49 5e-07
SPAPB18E9.04c |||sequence orphan|Schizosaccharomyces pombe|chr 1... 32 0.083
SPCC550.12 |arp6||actin-like protein Arp6|Schizosaccharomyces po... 31 0.11
SPAC56F8.02 |||AMP binding enzyme |Schizosaccharomyces pombe|chr... 31 0.15
SPCC18.03 |||shuttle craft like transcriptional regulator|Schizo... 28 1.0
SPAC20G8.05c |cdc15||cell division control protein Cdc15|Schizos... 28 1.0
SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual 27 1.8
SPCC757.09c |rnc1||RNA-binding protein that suppresses calcineur... 27 2.4
SPCC622.02 |||dubious|Schizosaccharomyces pombe|chr 3|||Manual 27 2.4
SPBC21D10.12 |hob1||BAR adaptor protein Hob1|Schizosaccharomyces... 27 2.4
SPBC13E7.09 |vrp1||verprolin|Schizosaccharomyces pombe|chr 2|||M... 27 3.1
SPAC26A3.05 |chc1||clathrin heavy chain Chc1 |Schizosaccharomyce... 26 5.5
SPBC216.07c |tor2|SPBC646.01c|phosphatidylinositol kinase Tor2|S... 26 5.5
SPAC644.16 |||RNA-binding protein|Schizosaccharomyces pombe|chr ... 25 9.5
SPBC4C3.12 |sep1||fork head transcription factor Sep1|Schizosacc... 25 9.5
SPAC1D4.11c |lkh1|kic1|dual specificity protein kinase Lkh1|Schi... 25 9.5
SPBC1683.09c |frp1||ferric-chelate reductase Frp1|Schizosaccharo... 25 9.5
>SPBC32H8.12c |act1|cps8|actin |Schizosaccharomyces pombe|chr
2|||Manual
Length = 375
Score = 330 bits (811), Expect = 1e-91
Identities = 151/171 (88%), Positives = 158/171 (92%)
Frame = +1
Query: 121 DEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK 300
+EE+AALV+DNGSGMCKAGFAGDDAPRAVFPSIVGRPRH G+MVGMGQKDSYVGDEAQSK
Sbjct: 2 EEEIAALVIDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHHGIMVGMGQKDSYVGDEAQSK 61
Query: 301 RGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTXAPLXPXAXXXXMTX 480
RGILTLKYPIEHGIV NWDDMEKIWHHTFYNELRVAPEEHP LLT APL P + MT
Sbjct: 62 RGILTLKYPIEHGIVNNWDDMEKIWHHTFYNELRVAPEEHPCLLTEAPLNPKSNREKMTQ 121
Query: 481 IMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALP 633
I+FETFN PA YVAIQAVLSLYASGRTTGIVLDSGDGV+HTVPIYEGYALP
Sbjct: 122 IIFETFNAPAFYVAIQAVLSLYASGRTTGIVLDSGDGVTHTVPIYEGYALP 172
>SPBC1347.12 |||actin-like protein Arp1 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 379
Score = 191 bits (466), Expect = 7e-50
Identities = 85/166 (51%), Positives = 118/166 (71%), Gaps = 1/166 (0%)
Frame = +1
Query: 139 LVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTL 318
+ +DNGSG KAGFAGDD P+ +FP+ VGR +H+ VM QKD +VG EAQ+ RG+L +
Sbjct: 12 ICIDNGSGFIKAGFAGDDIPKCLFPTCVGRIKHERVMPSSIQKDMFVGSEAQNLRGLLKI 71
Query: 319 KYPIEHGIVTNWDDMEKIWHHTFYN-ELRVAPEEHPVLLTXAPLXPXAXXXXMTXIMFET 495
+ PIE GI+ NW DME+IW + + + +L PEEHP+LLT PL + +ET
Sbjct: 72 QRPIERGIIQNWSDMEEIWSYIYSDQQLNTLPEEHPLLLTEPPLANIRNKEKIAEYFYET 131
Query: 496 FNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALP 633
N PA+ ++Q VL+LYAS RTTGIVL+ GDG++H+VPIY+G+++P
Sbjct: 132 LNVPALSFSLQPVLALYASARTTGIVLECGDGLTHSVPIYDGFSIP 177
>SPAC11H11.06 |arp2|SPAC22F8.01|ARP2/3 actin-organizing complex
subunit Arp2|Schizosaccharomyces pombe|chr 1|||Manual
Length = 390
Score = 170 bits (413), Expect = 2e-43
Identities = 80/170 (47%), Positives = 115/170 (67%), Gaps = 2/170 (1%)
Frame = +1
Query: 127 EVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRP--RHQGVMVGMGQKDSYVGDEAQSK 300
E A +V+DNG+G K G+A D+ PR FPSIVGRP R + + KD VGDEA++
Sbjct: 2 ESAPIVLDNGTGFVKVGYAKDNFPRFQFPSIVGRPILRAEEKTGNVQIKDVMVGDEAEAV 61
Query: 301 RGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTXAPLXPXAXXXXMTX 480
R +L +KYP+E+GI+ ++++M ++W +TF+ +L++ P +LLT P+ P A M
Sbjct: 62 RSLLQVKYPMENGIIRDFEEMNQLWDYTFFEKLKIDPRGRKILLTEPPMNPVANREKMCE 121
Query: 481 IMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYAL 630
MFE + +YVAIQAVLSLYA G ++G+V+DSGDGV+H VP+YE L
Sbjct: 122 TMFERYGFGGVYVAIQAVLSLYAQGLSSGVVVDSGDGVTHIVPVYESVVL 171
>SPAC630.03 |arp3|act2|actin-like protein Arp3|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 427
Score = 130 bits (313), Expect = 2e-31
Identities = 75/196 (38%), Positives = 105/196 (53%), Gaps = 32/196 (16%)
Frame = +1
Query: 139 LVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVG---------MGQK-------- 267
+++DNG+G K G+AG+DAP VFP+++ R G G M K
Sbjct: 8 IIMDNGTGYSKLGYAGNDAPSYVFPTVIAT-RSAGASSGPAVSSKPSYMASKGSGHLSSK 66
Query: 268 ------DSYVGDEAQSKRGI-LTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPV 426
D ++G++A K +L YPI HG + NWD ME+ W + + LR PE+H
Sbjct: 67 RATEDLDFFIGNDALKKASAGYSLDYPIRHGQIENWDHMERFWQQSLFKYLRCEPEDHYF 126
Query: 427 LLTXAPLXPXAXXXXMTXIMFETFNTPAMYVAIQAVLSLYASGRT--------TGIVLDS 582
LLT PL P IMFE+FN +Y+A+QAVL+L AS + TG V+DS
Sbjct: 127 LLTEPPLNPPENRENTAEIMFESFNCAGLYIAVQAVLALAASWTSSKVTDRSLTGTVVDS 186
Query: 583 GDGVSHTVPIYEGYAL 630
GDGV+H +P+ EGY +
Sbjct: 187 GDGVTHIIPVAEGYVI 202
>SPBC365.10 |||actin-like protein Arp5 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 721
Score = 97.1 bits (231), Expect = 2e-21
Identities = 51/164 (31%), Positives = 92/164 (56%), Gaps = 3/164 (1%)
Frame = +1
Query: 139 LVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTL 318
LV+DNGS +AG+ G+ P+ VF ++V R R + + + + VG++ + G ++
Sbjct: 27 LVIDNGSWQLRAGWGGEKDPKLVFDNLVSRYRDR----KLSRTSTLVGNDTLIEVGSRSI 82
Query: 319 -KYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTXAPLXPXAXXXXMTXIMFET 495
+ P E +++NWD ME++ +TF +L + EHP+ +T P MT ++FE
Sbjct: 83 ARSPFERNVISNWDLMEQVLDYTFL-KLGIDRMEHPICMTEPLANPTYVRSTMTELLFEL 141
Query: 496 FNTPAMYVAIQAVLSLYASGR--TTGIVLDSGDGVSHTVPIYEG 621
+N P++ I + S Y + + ++GIVL+ G+ SH +P+ G
Sbjct: 142 YNAPSVAYGIDGLFSFYHNTKPSSSGIVLNLGNAASHVIPVLNG 185
>SPBP23A10.08 |alp5|arp4|actin-like protein Arp4|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 433
Score = 93.9 bits (223), Expect = 2e-20
Identities = 55/169 (32%), Positives = 85/169 (50%)
Frame = +1
Query: 124 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKR 303
+EV+A+V+D GS + GF+G+D P+ V PS G + G + Y+ +S
Sbjct: 9 DEVSAIVIDPGSKWTRIGFSGEDIPKCVLPSYCGEFSDGRRLFG----EEYI---YKSNP 61
Query: 304 GILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTXAPLXPXAXXXXMTXI 483
G + +K I +G V NWD +W + +L+ P EHP+L+T P
Sbjct: 62 G-MEIKNAIRNGWVENWDVTVDLWRYGLEQQLKTNPLEHPILITEPFDNPPENRVKTLET 120
Query: 484 MFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYAL 630
MFE+ PA Y+A Q + +ASG+ T ++D G S IY+G+ L
Sbjct: 121 MFESLRCPATYLAKQETCAAFASGKGTACLVDIGAERSSVSAIYDGFVL 169
>SPAC23D3.09 |arp42|arp4|SWI/SNF and RSC complex subunit
Arp42|Schizosaccharomyces pombe|chr 1|||Manual
Length = 430
Score = 85.8 bits (203), Expect = 5e-18
Identities = 46/168 (27%), Positives = 85/168 (50%), Gaps = 2/168 (1%)
Frame = +1
Query: 124 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKR 303
EE+ +LV+D GS + G+AG+++P + PS + GV + ++ YV DE Q
Sbjct: 8 EEIPSLVIDPGSCWTRFGYAGEESPMTILPS------YYGVRSDVTGRNKYVVDELQIHA 61
Query: 304 GI--LTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTXAPLXPXAXXXXMT 477
I + +K +GI+ +W+ W +L+V P E+ +++T P + +
Sbjct: 62 PIPGMEVKNGKSNGIIQDWESTLYTWERGLKEKLQVNPTEYAMMITEPSWNPQSVRQQIM 121
Query: 478 XIMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEG 621
FE + PA Y+ QAV +A+ ++T +++D G + P+ +G
Sbjct: 122 EAAFEQLHVPAFYLTKQAVCVAFANSKSTALIVDIGSDNASVTPVVDG 169
>SPAC1071.06 |arp9||SWI/SNF and RSC complex subunit
Arp9|Schizosaccharomyces pombe|chr 1|||Manual
Length = 523
Score = 49.2 bits (112), Expect = 5e-07
Identities = 29/103 (28%), Positives = 45/103 (43%), Gaps = 4/103 (3%)
Frame = +1
Query: 325 PIEHGIVTNWDDMEKIWHHTFYNELRVAPEE----HPVLLTXAPLXPXAXXXXMTXIMFE 492
PI+ G V +W+ ++ W H Y+ L P + +PV L T FE
Sbjct: 113 PIQRGRVVDWEALKAFWKH-LYSLLLKDPNDTTFRYPVCLVIPTYWSLYDRELATQFFFE 171
Query: 493 TFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEG 621
P +A + ++ LYA G G+V+D G + PI +G
Sbjct: 172 ECQVPGFTIAYEPLMGLYAIGILHGLVIDIGYEKTDITPILDG 214
>SPAPB18E9.04c |||sequence orphan|Schizosaccharomyces pombe|chr
1|||Manual
Length = 800
Score = 31.9 bits (69), Expect = 0.083
Identities = 28/80 (35%), Positives = 33/80 (41%)
Frame = +2
Query: 386 STMSCVSPPRNTQSCSLXLPSXPXPXXRX*PXSCSKHSTRPPCTSPSKPCSRCTRPVVPP 565
ST S P T + S S P P SC+ ++ PP T S S P VPP
Sbjct: 142 STSSTSIPIPPTSTSSTDTNSNPLPTTST---SCTTSTSIPP-TGGSSSLSTPITPTVPP 197
Query: 566 VSCWTPATVSPTPCPSTRDT 625
S T +T P P ST T
Sbjct: 198 TS--TSSTSIPIPPTSTSST 215
Score = 30.7 bits (66), Expect = 0.19
Identities = 29/83 (34%), Positives = 34/83 (40%)
Frame = +2
Query: 377 IIPSTMSCVSPPRNTQSCSLXLPSXPXPXXRX*PXSCSKHSTRPPCTSPSKPCSRCTRPV 556
II + S S T S S LPS SC+ ++ PP T S S P
Sbjct: 87 IITESTSSTSSASTTGSSSSPLPSTST--------SCTTSTSIPP-TGGSSSLSTPITPT 137
Query: 557 VPPVSCWTPATVSPTPCPSTRDT 625
VPP S T +T P P ST T
Sbjct: 138 VPPTS--TSSTSIPIPPTSTSST 158
Score = 29.9 bits (64), Expect = 0.34
Identities = 19/55 (34%), Positives = 23/55 (41%), Gaps = 1/55 (1%)
Frame = -2
Query: 281 PT*ESFCPI-PTITP*WRGLPTIEGNTARGASSPAKPALHIPEPLSTTNAATSSS 120
PT S P+ PT+ P P N S P PL+TTN TS+S
Sbjct: 401 PTGNSTTPVTPTVPPTSSSTPLTTTNCTTSTSVPYTSTPVTSTPLATTNCTTSTS 455
Score = 28.3 bits (60), Expect = 1.0
Identities = 27/80 (33%), Positives = 32/80 (40%)
Frame = +2
Query: 386 STMSCVSPPRNTQSCSLXLPSXPXPXXRX*PXSCSKHSTRPPCTSPSKPCSRCTRPVVPP 565
ST S P T + S S P P SC+ ++ P T S S P VPP
Sbjct: 199 STSSTSIPIPPTSTSSTDTNSSPLPTTST---SCTTSTSIP--TGGSSSLSTPITPTVPP 253
Query: 566 VSCWTPATVSPTPCPSTRDT 625
S T +T P P ST T
Sbjct: 254 TS--TSSTSIPIPPTSTSST 271
Score = 25.8 bits (54), Expect = 5.5
Identities = 14/42 (33%), Positives = 19/42 (45%)
Frame = +2
Query: 476 PXSCSKHSTRPPCTSPSKPCSRCTRPVVPPVSCWTPATVSPT 601
P S S ST PP S S + + + SC T ++ PT
Sbjct: 361 PTSTSSTSTPPPPASTSSTGTSSSPLLSTSTSCTTSTSIPPT 402
>SPCC550.12 |arp6||actin-like protein Arp6|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 401
Score = 31.5 bits (68), Expect = 0.11
Identities = 40/178 (22%), Positives = 70/178 (39%), Gaps = 18/178 (10%)
Frame = +1
Query: 139 LVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTL 318
+V+DNG+ KAGFAG P+ + R + G + ++G+E + TL
Sbjct: 8 IVLDNGAYHIKAGFAGGKV--VEIPNCLTRSKD-------GNR-LFLGNELANCNDFTTL 57
Query: 319 KYPIEH--GIVTNWDDMEKIWHHTFYNELRVAPE--EHPVLLTXAPLXPXAXXXXMTXIM 486
++ H G + +W +W N + P ++ +LLT + ++
Sbjct: 58 QFRRAHEKGYLVHWSTETAVWDLVMRNVGVMEPSMADYSLLLTQPVFTMPSIEHNTIQLV 117
Query: 487 FETFNTPAMYVAIQAVLSLYASGRTT--------------GIVLDSGDGVSHTVPIYE 618
FE F A A L + G T +V+DSG +H +P+ +
Sbjct: 118 FEEFQFDAYLPCTPAELIPWDHGSFTMNQEDAYTGQHGECVLVIDSGYSFTHIIPVID 175
>SPAC56F8.02 |||AMP binding enzyme |Schizosaccharomyces pombe|chr
1|||Manual
Length = 1517
Score = 31.1 bits (67), Expect = 0.15
Identities = 16/48 (33%), Positives = 26/48 (54%)
Frame = +1
Query: 184 GDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYP 327
G+ PRA F ++ P H G+++ M KD G+E S +G + + P
Sbjct: 502 GNQNPRATFVPLLCLPEHGGMVISM--KDWIGGEEFMSPKGFKSPRTP 547
>SPCC18.03 |||shuttle craft like transcriptional
regulator|Schizosaccharomyces pombe|chr 3|||Manual
Length = 1077
Score = 28.3 bits (60), Expect = 1.0
Identities = 12/35 (34%), Positives = 16/35 (45%)
Frame = +2
Query: 530 PCSRCTRPVVPPVSCWTPATVSPTPCPSTRDTHSP 634
PC+ + PPV+C TP P C + H P
Sbjct: 621 PCTCGRTRLYPPVACGTPIPDCPYLCVLPKSCHHP 655
>SPAC20G8.05c |cdc15||cell division control protein
Cdc15|Schizosaccharomyces pombe|chr 1|||Manual
Length = 927
Score = 28.3 bits (60), Expect = 1.0
Identities = 13/30 (43%), Positives = 16/30 (53%)
Frame = -3
Query: 292 VPHLLHKSPSVPYRPSRPDGGAFPRSRGTR 203
+ L+ K+PS PY SRP A S TR
Sbjct: 306 IDQLISKAPSYPYSSSRPSASASLASSPTR 335
>SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1611
Score = 27.5 bits (58), Expect = 1.8
Identities = 14/36 (38%), Positives = 17/36 (47%)
Frame = +2
Query: 509 PCTSPSKPCSRCTRPVVPPVSCWTPATVSPTPCPST 616
P T+P P T PV P S P+ P P PS+
Sbjct: 1037 PSTAPPVPIPTSTPPV-PKSSSGAPSAPPPVPAPSS 1071
Score = 25.0 bits (52), Expect = 9.5
Identities = 24/78 (30%), Positives = 29/78 (37%), Gaps = 2/78 (2%)
Frame = +2
Query: 386 STMSCVSPPRNTQSCSLXLPSXPXPXXRX*PXSCSKHSTRPPCTSPSKPCSRCTRP--VV 559
S+ S P + S +PS P P P S PP PS +P V
Sbjct: 1055 SSSGAPSAPPPVPAPSSEIPSIPAPSGAP-PVPAP--SGIPPVPKPSVAAPPVPKPSVAV 1111
Query: 560 PPVSCWTPATVSPTPCPS 613
PPV P+ P P PS
Sbjct: 1112 PPVPA--PSGAPPVPKPS 1127
>SPCC757.09c |rnc1||RNA-binding protein that suppresses calcineurin
deletion Rnc1|Schizosaccharomyces pombe|chr 3|||Manual
Length = 398
Score = 27.1 bits (57), Expect = 2.4
Identities = 13/29 (44%), Positives = 16/29 (55%)
Frame = +2
Query: 530 PCSRCTRPVVPPVSCWTPATVSPTPCPST 616
P SR T+P+ S +P VSP PST
Sbjct: 262 PVSRLTQPLPSLASTASPQQVSPPAAPST 290
>SPCC622.02 |||dubious|Schizosaccharomyces pombe|chr 3|||Manual
Length = 127
Score = 27.1 bits (57), Expect = 2.4
Identities = 23/60 (38%), Positives = 28/60 (46%)
Frame = -1
Query: 321 FEGQDTSFALCLISYIRVLLSHTDHHALMAGPSHDRGEHGARSIISCETGLAHTGAIVYY 142
F G +F CLI++IR +SH D EHG II C T L G I+YY
Sbjct: 47 FAGLGIAFIYCLIAFIRE-MSHPSSR-------KDTMEHGL-PIILCST-LMLVGNILYY 96
>SPBC21D10.12 |hob1||BAR adaptor protein Hob1|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 466
Score = 27.1 bits (57), Expect = 2.4
Identities = 12/36 (33%), Positives = 15/36 (41%)
Frame = +2
Query: 506 PPCTSPSKPCSRCTRPVVPPVSCWTPATVSPTPCPS 613
PP P + T PV PV+ A P P P+
Sbjct: 367 PPPVMPQPAAAAVTTPVAAPVAAAAAAVPVPPPAPA 402
>SPBC13E7.09 |vrp1||verprolin|Schizosaccharomyces pombe|chr
2|||Manual
Length = 309
Score = 26.6 bits (56), Expect = 3.1
Identities = 17/41 (41%), Positives = 21/41 (51%), Gaps = 2/41 (4%)
Frame = -2
Query: 284 SPT*ESFC--PIPTITP*WRGLPTIEGNTARGASSPAKPAL 168
S T +SF P+PT P LPT NT + P+ PAL
Sbjct: 64 SNTPKSFAAPPVPTGAP---SLPTSSNNTQQAEERPSMPAL 101
>SPAC26A3.05 |chc1||clathrin heavy chain Chc1 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1666
Score = 25.8 bits (54), Expect = 5.5
Identities = 19/53 (35%), Positives = 26/53 (49%), Gaps = 5/53 (9%)
Frame = +1
Query: 385 FYNELRVAPEEHPVLLT--XAPLXPXAXXXXMTXIMFETFNTPAM---YVAIQ 528
+Y L E+HP+LLT A L P + I ++ NTP + VAIQ
Sbjct: 1399 YYRALNFYLEQHPMLLTDLLAALTPRIDHPRVIRIFEKSENTPLILNFMVAIQ 1451
>SPBC216.07c |tor2|SPBC646.01c|phosphatidylinositol kinase
Tor2|Schizosaccharomyces pombe|chr 2|||Manual
Length = 2337
Score = 25.8 bits (54), Expect = 5.5
Identities = 10/27 (37%), Positives = 17/27 (62%)
Frame = -1
Query: 321 FEGQDTSFALCLISYIRVLLSHTDHHA 241
+EG+DT+ +Y+R++L TD A
Sbjct: 74 YEGEDTTRITRFANYLRIILPGTDQKA 100
>SPAC644.16 |||RNA-binding protein|Schizosaccharomyces pombe|chr
1|||Manual
Length = 422
Score = 25.0 bits (52), Expect = 9.5
Identities = 10/13 (76%), Positives = 11/13 (84%)
Frame = -2
Query: 653 PDAGWRGGSAYPS 615
P AG+RGGSA PS
Sbjct: 139 PPAGYRGGSARPS 151
>SPBC4C3.12 |sep1||fork head transcription factor
Sep1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 663
Score = 25.0 bits (52), Expect = 9.5
Identities = 12/28 (42%), Positives = 16/28 (57%)
Frame = +2
Query: 527 KPCSRCTRPVVPPVSCWTPATVSPTPCP 610
KP S+ TRP +P + T +V P P P
Sbjct: 65 KPSSKATRPYIPSYTRLT-YSVPPLPIP 91
>SPAC1D4.11c |lkh1|kic1|dual specificity protein kinase
Lkh1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 690
Score = 25.0 bits (52), Expect = 9.5
Identities = 13/49 (26%), Positives = 23/49 (46%)
Frame = +2
Query: 488 SKHSTRPPCTSPSKPCSRCTRPVVPPVSCWTPATVSPTPCPSTRDTHSP 634
S+H + +PS + P+ P ++ W P T PT P + + + P
Sbjct: 244 SQHKSVNYSVTPSSINNHTAVPLSPTLAVWLPMT-QPTFQPPSANVYQP 291
>SPBC1683.09c |frp1||ferric-chelate reductase
Frp1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 564
Score = 25.0 bits (52), Expect = 9.5
Identities = 11/29 (37%), Positives = 17/29 (58%)
Frame = +1
Query: 244 VMVGMGQKDSYVGDEAQSKRGILTLKYPI 330
+M+G +Y+G AQ KR +LT + I
Sbjct: 165 IMIGAIHGFAYIGLAAQGKRALLTARVTI 193
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,886,621
Number of Sequences: 5004
Number of extensions: 62129
Number of successful extensions: 212
Number of sequences better than 10.0: 24
Number of HSP's better than 10.0 without gapping: 173
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 202
length of database: 2,362,478
effective HSP length: 70
effective length of database: 2,012,198
effective search space used: 295793106
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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